Tachysurus vachellii: 132854574
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Entry
132854574 CDS
T09596
Symbol
tia1l
Name
(RefSeq) cytotoxic granule-associated RNA binding protein 1, like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132854574 (tia1l)
03041 Spliceosome [BR:
tvc03041
]
132854574 (tia1l)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132854574 (tia1l)
Spliceosome [BR:
tvc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132854574 (tia1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
RRM_MUD2_C
XOO_2897-deam
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
132854574
NCBI-ProteinID:
XP_060739063
LinkDB
All DBs
Position
12:complement(26311184..26319764)
Genome browser
AA seq
345 aa
AA seq
DB search
MMADDDQPKTLYVGNLSRDVTEALIMQVFTQIGPCKSCKMIIDTAGNDPYCFVEFFEHMH
AAAALAAMNGRKILGKDMKVNWASMPSSQKKDTSNHFHVFVGDLSPEISTEDVRAAFAPF
GKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPPAP
KSNLESQSAGNTKHLSYEEVLNQSSPSNCTVYCGGVTSGLSDQLMRQTFSPFGQIMEIRV
FPDKGYSFVRFDSHESAAHAIVSVNGTCIEGHTVKCYWGKETADMRAMQQMAMPQQSNPA
YAAQPYGQWGQSYGNGQQMGQYVPNGWQMPAYGVYGQAWNQQGYK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggatgatgaccagcccaagacgttgtacgtcggaaacctctcccgggatgtg
acggaggctctgatcatgcaggtgttcactcagattggaccctgcaagagctgcaaaatg
atcattgatacggcaggaaacgatccgtactgctttgtggagttcttcgagcatatgcat
gctgctgctgccctggctgccatgaacggacggaaaatattaggaaaggacatgaaggtg
aactgggcttccatgccgagcagccagaagaaagacacaagcaatcacttccatgtcttc
gtcggtgacctgagcccagaaatctccacagaggacgtcagagccgctttcgctccgttt
ggaaaaatatccgatgctcgtgtggtgaaagacctggctactgggaagtccaaaggctat
ggctttatctccttcattaataaatgggatgcggagaacgccatccagcagatgaacggc
cagtggctggggggcaggcagatcagaaccaactgggccaccaggaagcctcctgctccc
aaatccaacctcgagagtcagtccgcaggcaacaccaaacacctgtcctacgaggaggtg
ctgaaccagtcgagccccagtaactgcaccgtgtactgtggaggggtcacctccggcctc
tcagatcagctgatgaggcagactttctctccgttcggacagatcatggagatcagggtt
ttcccagacaaaggctactcgttcgtgaggtttgattctcacgagagcgccgctcacgcc
atcgtgtctgtgaacgggacgtgcatcgagggccacaccgtcaagtgctattggggtaaa
gaaacagccgacatgagggccatgcagcagatggccatgcctcagcagagtaacccagcc
tacgcggctcagccgtacggacagtggggtcagtcttacggtaacgggcagcagatgggg
cagtacgtccctaacggctggcagatgccggcgtacggagtgtacggtcaggcctggaac
cagcagggctataagtaa
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