Tachysurus vachellii: 132854689
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Entry
132854689 CDS
T09596
Symbol
gabrr1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
tvc
Tachysurus vachellii
Pathway
tvc04080
Neuroactive ligand-receptor interaction
tvc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132854689 (gabrr1)
04082 Neuroactive ligand signaling
132854689 (gabrr1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132854689 (gabrr1)
Ion channels [BR:
tvc04040
]
Ligand-gated channels
GABA-A
132854689 (gabrr1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
AfaD
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
132854689
NCBI-ProteinID:
XP_060739242
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Position
12:complement(4218903..4235506)
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AA seq
474 aa
AA seq
DB search
MRADLLALLCVVMLGACGTQVLTRGLKLHTCRKLRSRRDATRPEGRLHKSGSLVLKRSPD
ITKGSVPKSEHVLRIDDHDFTMRPGFGGPAVPVGVDVQVESLDTISEVDMDFTMTLYLRH
YWKDERLSFSGKTNQSMTFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGKV
LYSVRVTVTAMCNMDLSHFPLDTQTCSLEIESYAYTDDDLMLYWKKGNDSLKTDDKISLS
QFLIQEFHTTSKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWID
RRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVN
YLSTLQERRERKLREKLPCTCGMSHAGHVMMSSSYSEMDNMTTGHYGVSEVNGDKREHML
VQLAMDKEQGAHGPAGKSRAYGVWIDTHAIDKYSRVIFPGAYTVFNIIYWSIYS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcggacctgctcgcgctgctgtgtgtggtgatgctgggcgcgtgcggcacacag
gttctaaccaggggactgaaacttcacacctgcaggaagctcagatcccggagagatgct
acaagaccagagggacgattgcacaaatctggaagtctcgtcctgaaaaggagccccgac
atcaccaagggctcggtgccgaaatcggagcacgtcctccgcatagatgaccacgatttc
acaatgcggcctggatttggaggcccggctgttcctgtgggtgtggacgtgcaggttgaa
agcttggacaccatctctgaagtggatatggacttcaccatgactctgtacctgaggcac
tattggaaagatgagcgcctgtccttctcaggcaagaccaaccagagcatgactttcgac
agccggttagtgaagaagatctgggttcctgacatgttcttcgttcactccaaacgctcc
ttcatccacgacacgacgacggacaacgtcatgctcagggtctatccggacggcaaagtg
ctctacagcgtcagggtcaccgttacagctatgtgtaacatggacctcagccactttcct
cttgatactcagacttgttcattggagatcgaaagctacgcgtacacggacgacgatctg
atgctctactggaagaaagggaacgactctctgaagacggatgacaagatttcactctct
cagttcctcattcaggagtttcacactacctcaaaactggccttctacagcagcacaggt
tggtacaaccgtctgtacatcaacttcaccctgagacgtcacattttcttcttcctgctt
cagacctactttcctgctactctgatggtcatgctgtcctgggtgtccttctggatcgac
cggcgcgctgtccctgccagagttcctctcggcatcaccacggtgctcaccatgtccacc
atcatcacaggcgtaaatgcgtccatgccccgagtgtcctacatcaaagccgtagacatc
tacctgtgggtcagcttcgtcttcgtcttcctttctgtcatcgagtacgcagcggttaac
tatctgtccactctgcaggaacgcagagagaggaagctcagagagaagctgccgtgcacg
tgcgggatgtctcatgcaggacacgtgatgatgagcagcagctacagcgagatggacaac
atgactacgggtcattacggtgtgtctgaggtgaatggagacaagagagagcacatgctg
gtgcagttggcaatggacaaggagcagggcgctcacggcccagccggaaagtctcgcgcc
tacggcgtctggatcgacactcacgccatagacaagtactcacgtgtgatcttccctgga
gcttacacagtcttcaatatcatatactggtccatttattcctaa
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