Tachysurus vachellii: 132854814
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Entry
132854814 CDS
T09596
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvc02000
]
132854814 (tmc1)
03037 Cilium and associated proteins [BR:
tvc03037
]
132854814 (tmc1)
Transporters [BR:
tvc02000
]
Other transporters
Pores ion channels [TC:
1
]
132854814 (tmc1)
Cilium and associated proteins [BR:
tvc03037
]
Other cilia and associated proteins
Stereociliary proteins
132854814 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
132854814
NCBI-ProteinID:
XP_060739419
LinkDB
All DBs
Position
12:12467692..12481451
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AA seq
925 aa
AA seq
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MHGCIFLIFLEQSCIHTGTRLLRTTMPREKLIALESDVSIDVDEGDITDSVYYVGIDVDG
KKQREEMDKKKERKLAKGQSDKVQKQQKKSTYLHNCEKNRINVGGEVEEIPMERKNSKNK
KAAIQQEDSEGDGEEKKMKMVQGNNDQSKKKEKVNKMATESNSKASSSSADESFVDSLNL
EEQEKLMKAIEEKKKLIATLKTQNWPMHKKLSTLRESQAFIEKNEGTLGQVKGKKLYTYK
VMVMKKWVKFKRNFNNFKKACIPWEGKIKKIESHFGSAVASYFIFLRWMFGMNIILFVLS
FGLVMFPEAILGLPYGSIPRKTVFKEELPTASDFDILWDLEGYIKYSIMFYGYYNNERTI
GWIKFRMPLCFLLVALCSIAYSYMEIIRIMAHNESKGSGGDDTHFNYSWTIFTSWDYLVG
NPETADINFASIATTFKESLIEEKELRKKEDIRWTIFFRILSNIMVFSILVGSGYLIYFV
VHRSEKFFRAGMYNFGWWERNEVNAVMSLLTTFCPMFFEAIALMEKYHPRIALRWQLARI
FALYVGNLYSFVIAIIEQINISRVQEEEMKHNLTIFDVNMPNRSIAENSTISHVDPADVP
RGPCWETIVGQEVVRMVISDTLTIYIVLLVNDFLRAIVIRVFNSCWCWDLEYTFPCYALF
DLSGNVLTLIFNQGMICLGSLFAPCLPALNVLRLQTSMYIQAWGVLCCNIPHPHIFKNSR
HSNFYMYIQLFILFVSTLPTIFAIVYMRPSFDCGPFSGKDHMYDVITESLELDFPRWFRN
VVSYVLNPGVVVPLVLFMVLTIIYLHSTSKTYKKANNDLKKKLRDQCEENRKRGKLEAKK
SAEYLEQVKNMAATEQDKVKQSNSNASGKGGNKRSRESGYFPTPRNVYSGSRGSSLKYSH
KPPCTRPPSARSHLLHGQLPGYPPY
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgcatggatgcatctttcttatttttcttgaacagtcctgcatacacacaggtacaagg
ttactgaggaccacaatgccaagagaaaagctcatcgcattggagagtgacgtcagcatt
gatgttgatgaaggagatataactgatagcgtttactatgttggaattgatgtggatgga
aaaaagcagcgagaggagatggacaagaagaaagaaagaaaacttgccaagggacaaagt
gacaaagtgcagaagcaacagaaaaaatctacttatcttcacaactgtgaaaagaacaga
attaatgtaggaggagaggtagaggagattcccatggaaagaaagaacagtaagaacaag
aaggcagcgatacagcaggaggattcagaaggagatggagaagaaaagaagatgaaaatg
gtgcaaggaaacaatgatcaatcaaaaaagaaggaaaaagtaaacaaaatggcaactgag
agcaactcaaaggcaagctcttcatcagctgatgaatcttttgtggactcgctgaatttg
gaggagcaggagaagctgatgaaagccatagaggagaaaaagaagctcattgccacactg
aaaacacaaaactggccaatgcacaagaaattatctacgctcagggagtcacaagcattt
atagaaaagaatgagggcactttaggacaagtcaaagggaagaagctctacacctacaag
gtcatggtgatgaagaaatgggtgaagtttaagcgaaactttaataactttaagaaggcc
tgcattccatgggaggggaagatcaagaaaattgaaagtcactttggctcagcagtagct
tcctattttatatttctgcgatggatgtttggcatgaacataattctctttgttctgtcc
tttgggctggttatgtttcctgaggcaatactagggctgccatatggaagtattcccagg
aagactgtctttaaggaagaactacccactgcttcggattttgacatcctatgggacctt
gagggttacataaagtattcaattatgttttacggctactacaacaacgaaagaacaatt
ggatggatcaagttccgcatgcccttgtgcttcttattggttgcattgtgcagcatagct
tacagttacatggagatcattagaatcatggcacacaacgaaagtaaaggaagtggagga
gatgacacccacttcaattacagctggacaatattcaccagctgggattaccttgttgga
aacccagagacagctgacatcaattttgcctccattgccacaacctttaaggaaagcctt
attgaagagaaagaactcagaaaaaaagaagacatacgatggacgatattttttcgcatc
ctgagcaatataatggttttctccatactggtgggaagtgggtacctaatctattttgta
gtgcacaggtctgaaaagtttttccgtgctgggatgtacaacttcggctggtgggaaaga
aatgaagtgaatgcggtgatgtctctgttaaccacgttctgccctatgttttttgaggca
atagcccttatggagaagtatcacccacgcattgccctacgctggcagctggcccgtatc
tttgccctttacgtaggcaacctctacagcttcgtcatagccatcattgagcagataaac
atctcgagggttcaagaagaggaaatgaagcataatctgaccatatttgacgtgaacatg
cctaacaggtccatagcagagaattcaaccatttctcatgtggatcctgcagatgtaccc
agagggccttgctgggagactattgtggggcaggaggttgtacgtatggtgatttcagac
acattgactatttacattgtgctgctggttaatgacttcctcagagcaattgtgattcgg
gtcttcaacagctgctggtgctgggacttggagtacacctttccgtgctatgcccttttt
gatctgagtggcaacgtgctcaccctcatattcaaccagggaatgatctgtttgggctcg
ttgtttgctccctgtcttcctgcactcaatgttctcagactgcaaacatccatgtacata
caagcctggggtgtcttgtgctgcaacatccctcacccacacatcttcaaaaactcacgt
catagcaacttttacatgtacatacagctgttcatcctctttgtctcaacactgcccacc
atcttcgccatcgtctatatgcgtccatcctttgactgtgggcctttcagtgggaaagac
cacatgtacgacgtgatcacggagtcactggagttggattttccgagatggttcagaaat
gtggtcagctacgtcttaaacccgggagtggttgtgcctttagtactgttcatggtcctc
acgattatttacttacattcgacgtctaaaacatacaagaaggccaacaatgacctaaaa
aagaaactgcgggatcaatgtgaagagaacagaaagaggggcaaacttgaagcaaagaaa
tcggccgaatatttggagcaggtcaaaaacatggctgccacagaacaggacaaggtcaaa
caaagcaacagcaacgcgtctgggaaaggaggtaacaagagaagcagagagagtggttat
tttcctactcctcgaaatgtgtacagtgggagtcgaggttcgagcctgaaatactcacac
aaacctccttgcactcgacctccttcagcccgctctcacctcctgcatgggcaactgcca
ggatatccaccatattaa
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