Tachysurus vachellii: 132855014
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Entry
132855014 CDS
T09596
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03030
DNA replication
tvc03410
Base excision repair
tvc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132855014 (pole)
03410 Base excision repair
132855014 (pole)
03420 Nucleotide excision repair
132855014 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvc03032
]
132855014 (pole)
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132855014 (pole)
Enzymes [BR:
tvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
132855014 (pole)
DNA replication proteins [BR:
tvc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
132855014 (pole)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
132855014 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
132855014
NCBI-ProteinID:
XP_060739706
LinkDB
All DBs
Position
12:complement(23261135..23291718)
Genome browser
AA seq
2283 aa
AA seq
DB search
MVLHNSGRYKGDRGGDQDKQQDDVSNLSAVKRLERSQFTDDMDARYGFERMKEPGEKTGW
LINMHPTEILDDDKRMISAVDYYFIQEDGSKFKVALPYKPYFYIATKKNCEREVVSFLSK
KFQGKISKLETIPKEDLDLHNHLVGLKRTYIKLSFNTVDDLVKVKREISPAVRKNREREK
SNDAYTSMLSSALVGGSVTTDDGDGKSKRMADQLDNIVDMREYDVPYHVRLSIDLKIHVA
HWYNVRYRGSAYPPEIVRRDDLVERPDPVILAFDIETTKLPLKFPDAETDQIMMISYMID
GQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEAALIQRWFEHIHETKPNIFVT
YNGDFFDWPFVETRAAQHNLNMYQEIGFQKDSQGEYKASQSIHMDCLRWVKRDSYLPVGS
HNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVLDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTLRHAVEEEEKIPLEQVTNFNQVCD
DIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGA
TCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGKPRAFHELQREEQARHEKK
RLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGSHKVWKKKLSA
AQENGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGAN
IITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTSNEKKPKVTISYPGAMLNIMV
KAGFTNDQYQELVDPASLSYQTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKA
ANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVIS
RKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDMDIRSILDWSYYIERLGSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISEMFTSEGKRQVANQTEP
GETPDMEDFGAPKRPLQPAILISTKRKRASQGEDSQAESQELELTQSWREILGPPPPMGT
TQEERLVWLRYHKKKWELQIRQRKERRKRRRMLDGEVQPTGGGVIRDGPTTGLGNFLRRT
ARSILDMPWQIVQIAETSHPGLYKLWAVIGTDLHCMKLNIPRVFYVNQRVPKQEEGATYK
KVNRILPRSNVVYYLYQYSVPEDMYQEHINEINADLSAPDVEGVYETQVPLLFRALVQLG
CLCMVNKQVVRALAGREADTFELEHLDMRSLAQFSYLEPGSVRHIYLYHHSQGHKALFGL
FIPSQRKASVFVLDTVRSNQMPNLSTLYGAERTALLEKTSEELLPPEKHQFEVRAENDVK
AIYRAVQRVLLSYKEERRGPTLIAVQSNWELRRLAAGMTVLEEFPVVPVHVTDDISYSVL
DWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPEDISIFGSDLFLARHLRKHNH
LLWLSPTARPDLGGKEADDSRLVMESDERGSVEINSPGCFSTVCVELDLQSLAVNTILQS
QHVNDMEGGASMGVSFDVIQHASLEDMMSGNQGVTAVASYDETALCSNTFRILKSMVVGW
VREITQYHNVYADNQVMHFYRWLRSPNSLLYDPALHRTLLNMMKKIFLQLVAEFKRLGSS
VVYGNFNRIILSTKKRRIDDAIAYVEYITNSIHSREIFHSLSITFSRCWEFLLWMDPANY
GGVKGKLPSSVMYGETGADKRKKGKDGDEEASEDEEDEVDEPEEERDGEEDEVEDLIESN
WNIMHYLPQAASCQKYFLMIISAYIAAVYHSMREELRRNAPGATPIKRRGGSQASQQPAG
DVSALPGMITFSQEYVSSELTQNIFTITQKIQKKVCGTRSVSQPSEMFPVLPGSHLPLNN
PALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYVLPEVICH
QCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYDTESIEMALVEALQKKLMSYTLQDL
ECAKCRGVKESNMPLYCSCAGDFKLTFSTKSFTEQVDVFRSIAAHYNMNFLLETIDWILR
MNN
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggttttacacaacagtgggagatataaaggtgacagaggaggagatcaggacaagcag
caggatgacgtgtctaacctgtctgccgtcaagcggcttgagcgcagtcagttcacagat
gacatggacgctcgctatggcttcgaacgcatgaaggagccgggagaaaaaaccggctgg
ttgatcaacatgcatccgacggagatactggatgatgataagcggatgatcagcgcagtg
gattattattttattcaggaggacggcagcaagtttaaggtggcactgccgtataaaccc
tacttctacatagcaactaaaaagaactgtgagcgagaagtcgtctcctttttgtcaaag
aagttccaaggaaagatctcgaagctggagacgattcccaaagaagatctcgacctacat
aaccaccttgtgggcctgaagaggacttacattaaactgtcctttaacacggtggatgat
ctggtgaaagtgaagcgagagatctctcctgccgtcaggaagaacagagagagggagaaa
tctaacgacgcctacaccagcatgctgtccagcgcgctcgtaggcgggagcgtgacgacg
gacgacggagacggcaagtctaagagaatggccgaccagctggacaacatcgtggacatg
agggagtacgatgtgccttaccacgtcagactgtccatcgacctcaagatccacgtggct
cactggtataacgtgcgctacagaggaagcgcgtatcctccggagatcgtacgccgggac
gacctcgtggaaagaccagatcctgtcatcttggcgtttgacatcgagaccaccaaactg
cctctgaagttccccgatgcagaaaccgaccagatcatgatgatctcgtacatgatcgac
gggcagggtttcctcatcaccaacagagagatcgtctctgaggacatcgaggatttcgag
ttcacccctaagccggagtacgagggccctttcaccgtgtttaacgaacccgacgaggct
gctcttattcagaggtggttcgaacacatccatgagaccaaacccaacatttttgtcacc
tataacggagacttcttcgactggccgttcgtggagacgcgtgcggctcagcacaacctc
aacatgtatcaggagatcggttttcagaaggacagccagggcgagtacaaggccagccag
tctatacacatggactgcctcaggtgggtgaagagagacagttacctgcctgtcgggagc
cacaacctgaaagcagcagcgaaggccaagctgggttacgaccctgtggagctggacccg
gaagagatgtgtcgcatggccaccgaggagccgcagactttagccacctactcggtgtcc
gacgcagtggctacatactatctctacatgaaatacgttcatcccttcatcttcgccctg
tgcaccatcatccccatggagcctgacgaggtgttgcgtaaaggttcagggactctgtgc
gaggcgttgttgatggtgcaggctttccacgccaacatcattttccccaacaagcaggag
caggtgttcaacaagctcacagatgacggccacgtcctggactctgagacctacgtcggc
ggccacgtggaggccctggagtccggagtgttccgcagcgacatcccgtgccgcttcaaa
atgaatccggcagcgtttgatttcctgcttcagagggtggagcgaacgctgcgtcacgcc
gtcgaagaggaggagaaaatcccgctggagcaagtcacaaactttaaccaggtttgcgat
gacatcaaaaagaagctgatttcgttaaaggaagtgccgaacaggatcgagtgcccactt
atttaccatctcgacgtaggcgccatgtaccccaacatcattcttaccaaccgactccag
ccgtctgcgatggtggacgaggcgacctgtgctgcatgtgactttaataaacctggagct
acctgccagaggaggatggcctggcagtggagaggagagatcatgccggccagtcgtagt
gagttccatcgtattcagcagcagctggagtctgagaaattccctcctctgtttcctaac
ggaaaaccacgagccttccacgagctgcagcgtgaggaacaggcgcgacacgagaagaag
cgtctgggagactactgtcgaaaggcctataagaaggtgcacttgaccaggctggaagag
agagtcactacaatatgtcagagagagaattccttctacgtggacacggtccgagcgttc
cgagatcgccgctacgagtttaaaggatcgcataaggtgtggaagaagaagctgtctgcg
gctcaggagaacggcgacgctgcggaggtgaagcgctgtaagaacatggagatcctttac
gagtctctgcagctcgcacacaaatgtatcctcaattctttctacggatacgtcatgagg
aaaggagcgagatggtattccatggaaatggctggcatcgtgtgtcacacaggagccaac
atcatcacacaggccagagagctgatcgaacagattgggagacctttagagctggacacc
gacggtatctggtgtgttcttcccaactccttccctgagaactttgtcatcaagaccagc
aacgagaagaagcccaaagtgaccatcagttaccccggagccatgctgaacatcatggtc
aaggcaggctttaccaacgatcagtaccaggagctggtggacccggcgtcgctcagctac
cagacgagatccgagaacagcatcttcttcgaggtggacggaccgtacctggccatgatc
ctgcctgcttctaaagaggagggaaagaagctgaagaagagatacgccgtgttcaacgag
gacggctctctggctgagctgaagggtttcgaggtgaagcgaagaggagagctccagctc
attaaaatcttccagtcgtccgtgttcgaggctttcctgaaaggcaccactctggaggaa
gtctacgcctcggtggccaaagtggctgactactggctggacgtgctttacagcaaggca
gctaacatgccggacgcagagctcttcgagctgatttcggaaaaccgctctatgtcccgg
aagctggaggactacggcgagcagaagtccacgtccatcagcacggccaaacgtctggcg
gagtttctcggagatcagatggtgaaggacgcggggctgagctgtcgctacgtcatttct
cgcaaacccgaaggctctcccgttaccgagagggcgattcctctggccatattccaggcc
gaacctagcgttaagaagcacttcctgcgcaagtggctgaagatgcccagcctccatgac
atggacatcagatcaatcctggactggagttactacattgagagacttggcagcgccata
cagaagatcatcaccattccagcagcactacagcaggtgaaaaacccggtgcctcgagtg
cgccatcccgactggctgcataagaagcttctggaaaagaacgacatctacaaacagaag
aagatcagtgagatgttcaccagcgagggaaagagacaggtggccaatcagaccgagcca
ggcgagactcctgacatggaggattttggagctccaaagcgcccccttcagcctgctatc
ctcattagtactaagaggaagcgagcgtctcagggtgaagacagccaggccgagtcccag
gagctggagctcacacagtcctggagagagatactgggtcctccgccgcctatgggtaca
acacaggaagagaggctggtgtggctgcgctaccataagaagaagtgggagctgcagatc
cgccagaggaaagagcgcaggaagagacggcgaatgcttgacggagaggttcagcctact
gggggcggcgtgatcagggacggtccgaccacagggttggggaacttcctgcgcaggact
gctcggagcatcctggacatgccctggcagatagtacagattgctgaaaccagtcaccca
ggactgtataagctgtgggcggtgatcggcactgacctgcactgcatgaagcttaatatc
ccacgagtgttttacgtcaatcagagagtccccaagcaggaagaaggagctacttacaaa
aaggtcaaccggattttgccgcgctccaacgtggtgtattacctgtaccagtactctgtg
cctgaggacatgtatcaggaacacatcaatgagatcaacgcagacctttcggccccagac
gtcgagggcgtctacgagacacaggtgccgctgcttttccgggcgctggtgcagctcggc
tgcttgtgtatggtcaataagcaggtggtgagagctctggccggacgagaagccgacacc
ttcgaactggagcacctggatatgaggtcgctcgctcagttcagctacctggagccaggc
agcgtgagacacatctacctgtatcatcacagtcagggccacaaggctctgttcggcctc
ttcatcccctcacagcgcaaagccagcgtcttcgtcctggacacggttcgcagcaaccag
atgccaaacttgagcacgctgtacggagccgagcgcacggcgctgttggagaaaacatcc
gaggagctgctgcctcctgagaagcaccagtttgaagtgcgtgctgagaacgacgtgaag
gctatttaccgcgcagtgcagcgcgttctgctcagctataaggaggagcgtcgtggtccc
actctcattgccgtgcagtctaactgggagcttcggcgtctggcggcaggaatgaccgtg
ctggaggagttccccgtggttcccgtgcacgtgaccgacgacatcagctacagcgtgctg
gactggcagcgacacggcgcacgccgcatgatcaaacactacttaaacctggacagctgt
ctttcacaggctttcgacatggccaggtattaccacttgcctgtagggaacctgcccgag
gacatctctatattcggctcggacctctttctggcacgtcacctgcggaagcacaaccac
ctgctgtggctttcacccacagccagacccgacctcgggggcaaggaggcagacgacagc
cggctggtgatggagagcgacgagcgaggctcggtggagatcaactctccgggctgcttc
tccacagtgtgtgtggagttggatcttcagagcttggcggtgaacaccattctccagtcg
cagcatgtgaacgacatggagggcggagccagcatgggcgtgagcttcgatgtcattcag
cacgcatcgctggaggacatgatgtcaggaaaccagggggtgaccgctgtggctagttat
gatgagactgcgctctgctccaacacattcaggatcctgaagagtatggtggttggctgg
gttcgggagatcacacagtaccataatgtgtatgcagataatcaggtgatgcacttctac
cgctggctgcgttcccccaactcgctcctgtacgacccggcgctgcaccgcacgctgctc
aacatgatgaagaagatcttcctccagctggttgctgagtttaagcgactcggttcctct
gtggtctatggaaactttaaccgcatcatcctcagtaccaaaaagcggcgcatcgacgac
gccatcgcttacgtggagtacatcaccaacagcatccattcacgggagatcttccactcc
ctgtccatcaccttctcccgatgctgggagttcttgctgtggatggatccagctaactac
ggaggagtgaaagggaagttgccctccagcgtcatgtacggagagaccggcgctgacaag
agaaagaaaggaaaggacggtgacgaggaggccagcgaggatgaggaggatgaggttgat
gaaccagaggaggagcgagatggtgaggaggatgaggtggaggacctgattgagagcaac
tggaacataatgcattacctgcctcaggctgcttcctgtcagaaatacttccttatgatc
atctcagcctacatcgctgccgtgtaccacagcatgagggaggagctcaggagaaatgct
ccgggagccacgcccataaagaggcggggcggaagccaggcatcccagcagcctgccggt
gatgtcagcgcacttcctggcatgatcacgttctctcaggagtacgtgtcgagcgaactc
acacaaaacatcttcaccattacacagaagatccagaaaaaggtgtgtgggacacgcagc
gtgtctcagccgtctgaaatgttccccgtgctgccaggatcacatctgcccctcaacaac
cctgctctggagttcatcaaatatgtctgtcaggttctgtcgctggacgctaacatagtg
aaccaggtgaataagctgaagcgggatctcttgcgcttggtggacgtcggcgagttctca
gaagaggctcagttccgtgacccctgcaactcctacgtcctgccggaggtcatctgccac
cagtgtaacttctgccgtgaccttgacctctgcaaggacccctccgtcgcccaggacggc
tcggtcctgccgcagtggttctgctccaactgccaggcgcagtacgacaccgaatctata
gagatggctcttgttgaagctctgcagaaaaagctgatgagttacacgctgcaggacctg
gagtgtgctaaatgcagaggggtgaaggagtccaacatgcctctttactgcagctgtgca
ggagacttcaagctgaccttcagcacaaagagcttcaccgagcaggttgatgtgttcaga
agcatcgctgcacattacaacatgaacttcctgcttgagaccatcgactggatcctgagg
atgaacaattag
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integrated database retrieval system
