Tachysurus vachellii: 132855301
Help
Entry
132855301 CDS
T09596
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
tvc
Tachysurus vachellii
Pathway
tvc04010
MAPK signaling pathway
tvc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132855301 (cacna1ba)
04020 Calcium signaling pathway
132855301 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132855301 (cacna1ba)
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
132855301 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
132855301
NCBI-ProteinID:
XP_060740145
LinkDB
All DBs
Position
12:complement(22520970..22647553)
Genome browser
AA seq
2275 aa
AA seq
DB search
MARFEDDLPVRYAGGSPSAAGRVPSRQQGPPGAPRVYKQTMAQRARTMAIYNPIPVKQNC
LTVNRSLFIFSEDNVIRKYAKRVTEWPPFEYMILATIIANCIVLALEQHLPADDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILTTVGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK
FHRACFRNDTNELVAEFPCGSEPPAHVCENGTTCREYWPGPNFGITNFDNILFAVLTVFQ
CITMEGWVEILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKHAEEKSPLDGAWYKRKCNNPVLKR
SKKSKNDLINAEEGEDHFTDILSVAPQGSPFARASVKSSKNESSSYLRRKEKRVRFFIRR
MVKSQGFYWTVLCLVGLNTLCVAIVHYDQPRWLTYALYLAEFVFLGLFLIEMSLKMYGLG
PRSYFHSSFNCFDFGVIVGSIFEVVWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVF
QILTGEDWNAVMYHGIESQGGVGSGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEEAISKKLALQKAKEVKEVSPMSAASISLAANYVCSPAHHYLSQEQRRSLKM
MSVWEQRTTQIRKHIRASSEALYNEELNPRLTSTQHLRPDITTHLDRPLVVEPRCDWDKP
RDLRVEADTPEDPKVQATPDPLSMEPPQSQPPRKHHHRRRERTSNEGRENGETGASRHHV
HHSRSKETEGTRAKDGKTERSHSRDARAEHRHHRSHRAGHEGNGIVGAKSERRSHHREGS
GSARGDGERSSRGEEGGNGGRRRHRQRAGKVQSSLEGVEQRENGEREESKPPENRQTELG
GDMLPAPSQQLAVGNRWGLEKPEDSDNQRNVSRIGGLGVHIPVTITSPPGETTLIAMNSI
DSETAPITEKNLEEVNQSGPRPILPYSSMFIFSPTNPVRRLCHYIVSLRYFEMCILMVIA
MSSIALAAEDPVNANALRNYVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNI
LDFIVVSGALVAFAFSGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKN
VLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLERDCRGQFLEYDKHEVSAQPREW
KKYDFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDKGPSPGYRIEMSIFYVVYFV
VFPFFFVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMPQNQQSFQ
YRMWKFVVSPPFEYSIMIMIALNTVVLMMKYYDAPYAYEAMLKYLNIVFTALFSLECVLK
IIAFGPLNYLKDAWNVFDFVTVLGSITDILATEINDRLINLSFLRLFRAARLIKLLRQGY
TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIDLNEDTAINHHNNFRTFLQ
ALMLLFRSATGEAWHEIMLSCLSHRACDVNSGTPGNECGSDFAYFYFVSFIFLCSFLMLN
LFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYRDMYEMLLHMCPPLG
LGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGIVAQRLCDAELK
KELATVWPNLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKKLQMQQQQFKDQ
PGPQNNVGALLEPILCPMQEKSRSMMDCPSDILHPISLSSATLNNGHTLHDNAIKGSSSW
ASEKTKDVQRSKKRPMLRGQSVDISNTNTAQVSVEMRKMENNANTIQQPAGLEGQGRAVS
MPKLNAEMQRSHSRHSPGTLLAPIPDSPLRRSVSTFSSQRPPEVTVNEYILEKPAQERPH
HHHHHHRCHHRKDREKKQRSLDRSPGGQPNSTGGTAADSAGNSSFQERGQDRGRSHERKH
HSSAAEKQRYYSCDRYGSREHFPTKPAPASCATSPGEAQETTFTKQGSGWAKGSPVLLSS
GSSTPSRWRRQLPQTPVTPRPAVTYRTANSSPVSSAVAQNTLPPPSPVMRISSEPYLRPQ
TTLPSPQQIVTLPTLSQHSLLGMPNGYHYIMGMGTGGSSDNIQRYYPEAEKEEWC
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtttcgaagacgacctgccggtccggtatgcaggcggctctccgtcggctgcg
ggccgagtgccgagcaggcagcagggccccccgggtgcccccagggtctacaaacagacc
atggcccagcgagcccgtaccatggccatctacaaccccatccctgtcaagcagaactgc
ctcaccgtcaaccgctctctcttcatcttcagcgaggataacgtgattcggaagtacgcc
aagagagtcaccgagtggcctccatttgagtacatgatcctcgccaccatcatagccaac
tgcattgtcctggccttggagcagcatttacctgcggatgataaaaccccaatgtccgag
cgcctggatgacacagagccctattttattggcatattttgctttgaggctgggattaag
atcattgcacttggctttgcttttcataaaggctcctacctccgtaacggctggaacgtg
atggatttcgtcgttgtgctgacggggattttgaccaccgtcgggacagactttgacttg
cggacactcagggcagtgcgagtcctacggccactcaaactggtgtctggaattcccagt
cttcaggtggtcctgaagtccatcatgaaagccatggtgcctctgctgcagatcggcctg
ctgcttttctttgcaatcctcatgtttgccatcattggtctggacttctacatgggcaag
ttccatcgtgcctgtttcaggaacgatactaatgaactggtggctgagttcccatgtggc
tcggagcctccagcacatgtctgtgagaacggcaccacatgtcgggagtactggcctggc
cccaactttggcatcaccaactttgataacatcctcttcgccgttctcacagtcttccag
tgcattaccatggagggctgggtggaaatcctttacaatgccaacgatgcctcagggaac
acctggaactggctgtacttcatccccctcatcatcattggctccttcttcatgctgaac
ctggttctgggagtgctatcaggagagtttgctaaggagcgggaacgtgtggaaaagagg
caggagttcctaaagctacgcaggcagcagcagattgagcgagagctcaccggctacctg
gagtggatctgtaaagcagaggaagtcatgctcgctgaggaggacaagcatgcagaggag
aagtctccactggacggtgcctggtacaagaggaaatgcaacaacccagttctgaaacga
tccaagaagagcaagaacgacctgatcaacgcagaagaaggggaggatcatttcacagat
atcttgtcagtcgcaccccagggctccccttttgctcgggccagcgtgaagagcagcaag
aacgagagctcttcgtatttgcgcaggaaagaaaagcgagtgcgttttttcatccgccgc
atggtgaagtctcagggcttctactggacggtgctgtgtttggtgggtctgaacacgctg
tgtgtggctatagtgcactacgaccagcctaggtggctcacctacgctctctatctggca
gagtttgtattcttgggcctgttcttgattgagatgagtctgaagatgtatggcctcggc
cctcggagctacttccattcttccttcaactgtttcgactttggcgtgattgtagggagt
attttcgaggtggtatgggcggcagttaaacccggggcgtctttcggcatcagcgtgtta
cgagctcttcggctgctgaggatcttcaaggttacaaagtattggaactctttgaggaat
ctggtggtgtctctgctgaactctatgaagtccatcatcagcctgttgttcctcctgttc
cttttcattgtggtgttcgctctgcttggaatgcagctctttgggggacagtttaatttt
gaagacgagaccccgacaacgaactttgacaccttcccagcagcaattctgacggtgttc
cagattctgacaggagaagactggaatgcagtgatgtaccacgggatcgaatctcaggga
ggagtgggcagtggcatgttctcctcagtctacttcatcgtcctcacgctgtttggaaac
tacactcttcttaacgttttcctggctattgctgtcgacaaccttgcaaatgcacaggaa
ctcacaaaggatgaagaggaacaagaagaggccatcagtaagaaactggctctccagaag
gctaaagaggtgaaggaagtcagccccatgtcagctgctagcatttctcttgcagcgaat
tatgtctgctcccccgcccatcactacttgagccaagagcagcggcgctcgctgaagatg
atgtccgtatgggagcagcgtaccacacagatccgtaagcacatcagagccagcagtgaa
gccctgtacaacgaggaactcaaccctcgcctgacctccacccagcacctacggccagac
atcaccacccacctggaccggccgctggtggttgagccgcgatgcgactgggacaagccc
agggacttgagagtcgaagcagatacacctgaggaccccaaagtgcaggcaacccctgac
cccctttccatggagcctcctcaatcacagcccccacgtaaacaccatcaccggagacgt
gaaagaacttccaacgaaggcagagaaaatggtgaaactggagcctcacgtcatcacgtg
caccacagccgcagcaaggagactgaaggaacacgggccaaagatggtaaaactgaacgc
agccacagccgtgatgcgagagcagaacacagacaccaccggtcgcatagggcaggacat
gagggcaacggtattgttggcgccaagagtgagagacgctcgcaccacagagaaggctca
ggctcggccaggggggacggcgagaggagctcacgaggggaggaagggggcaacggaggc
cggaggaggcaccggcaaagggctggcaaggtacagtcttcactagagggtgtggagcag
agggagaatggcgagcgagaagagagcaagcctccagaaaacagacaaactgaactgggt
ggagatatgctgcctgcaccttctcagcagcttgcagtggggaaccggtggggtctggag
aaaccagaagattcggataaccagcgaaatgtcagtcgcataggaggcctgggggtccac
atccccgtcaccatcacttctccacctggagagaccactctcatagccatgaacagtata
gacagtgagacggcgcccataactgagaagaacctggaggaggtgaaccagagcgggcca
cgtcccatacttccttacagctctatgtttatcttcagcccaactaatccggtgagacgt
ttgtgccattacattgtcagtctgcgttactttgagatgtgtatcctgatggttatagcc
atgagtagcattgcactggctgcagaagaccctgtcaatgccaacgctctgcggaactac
gtcctgaagtatttggactacgttttcaccggtgtgttcacatttgaaatggtaattaag
atggtagatttgggcttgctgctgcatccaggctcctacttcagagacttgtggaatatt
ctggacttcattgtggtcagtggagctctggtggcattcgctttctcagggaccaaagga
aaagacatcagcaccatcaagtctctcagggtgttacgagtcctgcggccattgaagacg
atcaaacgcttaccgaagctgaaggctgtgttcgactgcgtggtgaactccctgaagaac
gtgctgaatatcctcatcgtctacatcctcttcatgtttatcttcgccgtcattgctgta
cagcttttcaagggcaagttcttctactgcacggatgaatccaaaggcctagagagggac
tgcagagggcagtttctggagtacgataagcacgaggtctcggctcagcctagagagtgg
aagaaatatgactttcactatgataacgtgctgtgggcttttcttacactcttcactgtg
tcaacaggagagggctggcctacggttctgaagcattctgtggacgccacctttgaggac
aagggtcccagtcctggttaccgcatcgagatgtccatcttctacgtggtctactttgtt
gtcttccctttctttttcgtcaacatctttgtggccttgattattatcacgtttcaggag
cagggagacaaagccttgtccgagtgtagtctagagaaaaacgagagagcctgtatcgac
tttgccatcaatgccaaaccgctgacacgctacatgccccagaatcagcagtctttccag
taccggatgtggaagtttgttgtttcaccgccttttgaatactccatcatgatcatgatt
gccctcaacactgtggtcctcatgatgaagtactacgatgcaccgtatgcctacgaagca
atgctgaagtatctcaacatcgtctttactgcccttttttcactggagtgtgttctgaag
attattgcttttggtccactgaactacctaaaggacgcatggaatgtcttcgactttgtg
acagtgctggggagcatcacggatatcttggctactgaaattaatgaccgtctgataaac
ctaagcttcctgaggctgttccgagccgcccgtctcatcaagctcctccggcagggttac
accatccgcatcctgctttggacgtttgtgcagtcctttaaggctcttccttatgtctgc
ctcctgatcgctatgctgttcttcatttatgccattataggaatgcaggtctttggaaac
atcgacctgaatgaggatacggccatcaaccaccacaataacttccgcactttcctacaa
gctctcatgctgctcttcaggagcgctacaggagaggcctggcacgagatcatgctgtca
tgtctgagtcaccgtgcatgcgatgtgaactcgggcacgccgggaaacgagtgcggcagc
gactttgcctacttttactttgtctccttcatcttcctttgctctttcctgatgctgaat
ctgtttgtggctgtgatcatggataattttgaatacctgacccgggactcctccatcctg
ggtccccaccacctggacgagttcatccgcgtgtgggctgagtacgacccggccgcatgt
ggccgtatcaagtaccgcgatatgtatgagatgctgctccacatgtgcccacctttaggt
ttgggaaagaaatgtccaccacgaatcgcctacaagcgtctggtgaagatgaacatgccc
atcgcagacgacaacacggtccattttacctccacgctcatggctcttatccgcaccgcg
ctggagatcaaactggcctcaggaatcgtggctcagcgtttatgtgatgcagagctaaag
aaggagctggcaaccgtctggccaaacctgtctcagaagaccatggatctgctggtgact
ccccataaacctaacgagctgacggttgggaaagtctatgcagctctcatgatcttcgac
tactacaaacagaacagagccaagaaactgcagatgcagcagcagcagttcaaagatcag
ccaggacctcagaacaatgtgggagctctcctggagcccattctgtgccctatgcaggag
aagagcaggagcatgatggactgtccatcagatatcctgcatcccatcagtctcagctct
gcaactctgaacaacggacacacactccatgacaacgccattaaaggctcctcgtcttgg
gcttcagagaaaaccaaagacgttcagaggtcaaaaaagcgacccatgctgagaggccag
tcagtggacatctcaaacacaaacactgcccaggtgtcagtagagatgagaaaaatggag
aacaatgccaacacaatccaacaacctgctggtttagagggtcaaggacgagcagtatct
atgcccaaactcaatgcagagatgcagagaagtcattcgcgtcactctccaggaacctta
cttgcgccgatccctgattcccccctgaggcgatccgtgtccacgttttcctcacagcgt
cctccagaggttactgtgaacgaatacattctggagaagcctgcacaagagagaccgcat
caccatcatcatcatcaccgctgccatcaccgaaaagacagagagaagaagcagaggtcg
ctggataggtcaccaggtggacaacctaatagtacaggtggcacagcagctgactctgcg
ggaaactcctcatttcaggagagagggcaagaccgaggccgttcccacgaaaggaaacac
cattcatcggcagcggagaagcaacgctactactcgtgcgatcgctacggcagtcgagag
cattttcccaccaaacctgcgccagccagctgcgccacctcacccggagaggctcaggag
accaccttcaccaagcagggcagtggttgggctaaagggagcccggtgttgttgagttcg
ggctcgagcacgcccagccgctggcgcaggcagctgcctcagacgcccgtgacccctcgc
ccagcggtgacctacaggactgccaactcctcccctgtgtcctctgcagtcgcccagaac
accctccctcccccgagccccgtaatgcgcatcagctccgagccgtacctccggccccag
acgacgctgccgagcccacagcagatcgtgacgctcccgacgctatcccagcattccctg
ctcgggatgcccaatgggtaccattacattatgggcatgggcactggcggcagcagcgac
aacatccagcgctactaccctgaagcagagaaggaagaatggtgctag
DBGET
integrated database retrieval system
