Tachysurus vachellii: 132855380
Help
Entry
132855380 CDS
T09596
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tvc01100
Metabolic pathways
Module
tvc_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
132855380 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tvc01003
]
132855380 (chsy1)
Enzymes [BR:
tvc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
132855380 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
132855380 (chsy1)
Glycosyltransferases [BR:
tvc01003
]
Glycan extension
O-Glycan
132855380 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
132855380
NCBI-ProteinID:
XP_060740263
LinkDB
All DBs
Position
1:complement(34507409..34556342)
Genome browser
AA seq
802 aa
AA seq
DB search
MAARSRRAWFSVLLGLVVGFTLASRLILPRATELKKAGQRRSASGGGGCGINGPLRRDHG
AGVRWPAQGSGMLPTEKAVLSSQNFLFVGVMTAQKYLNNRAVAAHRTWAQSIPGKVEFFS
SEGSDTSLPIPIVALKNVDDSYPPQKKSFMMLKYMHDHYLDRFEWFMRADDDVYIKSERL
ESFLRSLNSSEAIFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLRRMVPHIRQ
CLQEMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEPNKKGYIRDLHNSKIHRAI
TLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVQMSRYGNMEVHKEDLQLGMPPS
FMRFHPHQREEVLEWEFLTGKYIFSALDGQPPRRGMDSSQKIALDDIIMQVMEMINANAK
TRGRVIDFKEIQYGYRRVNPMYGAEYVLDLLLLYKKHKGKTMTVPVRRHAYLQQTFSKIH
FLEEDEMDAQALAARINQGSDSLSFLSSSLKKFVPFKLSGSSADQQEPKEKKVNILVPLA
GRYEIFVRFMANFEKICLIPNQNVRLLILLFSTDNNTERMKQIELMREYRLKYPKADMEI
EPVSGPFSRALALEVGSAHFSNDSLLFYCDVDLLFTADFLKRCRANTVLGEQTYFPIIFS
QYDPKVVYAGKVPSNNHYVFTSKTGLWRHFGFGIVCVYKGDLVKAGGFDVSIQGWGMEDV
DLFNKFVQSGIKLFRSTDTGIVHVHHPVICDPNLDPKQYKMCLGSKASSHGSTQQLAELW
LEKNDHGFRRISSSNNGSMRTA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcagccagaagtcggagagcatggttcagtgtgcttttgggattggtggtgggtttc
actctggcatccaggctgattttaccccgcgccacggagctgaagaaagccgggcagagg
cgcagtgcgagcggcggcggaggctgcggcattaacggcccgctgaggagagaccacgga
gccggggtgaggtggccggcgcagggcagcgggatgctgccgaccgagaaagccgtcctg
agtagccagaatttcctcttcgtcggcgtcatgaccgcgcagaagtacctgaacaaccgt
gcggtggcggcgcataggacctgggctcagagcattccaggtaaagtggaattcttctct
agcgagggctcggacacgtcccttcccatcccaatcgtggccctcaaaaacgtggatgac
tcttaccctccacagaagaaatcgttcatgatgctcaagtacatgcacgaccactacctg
gaccgcttcgagtggttcatgcgtgccgatgacgacgtctacatcaagagcgagcgcctg
gagagcttcctgagaagcctgaacagcagcgaggccattttcctgggccagacaggaatg
ggtgctcgtgacgagctgggcaagctggcactcgagcccggcgagaacttctgcatggga
ggcccaggcgtgatcatgagccgcgaggtactgcgcaggatggtgcctcacatccgccag
tgtctacaggagatgtacaccacacacgaggacgtggaagtgggacgctgcgtgcgcaga
tttgccggggtgcaatgcgtctggtcttatgagatgcagcagctgttttatgagaactat
gagccgaacaagaagggctacatccgggacctgcacaacagtaagatccacagagccata
acactccatcccaacaagaacccgccttatcaataccggctgcacagctacatgctgagc
cgcaaaatcgcagaactgcgccaccgaaccattcagctccaccgagaaatcgtgcagatg
agcagatatggcaacatggaggtgcataaagaggacttgcaactcggcatgcctccctca
ttcatgcgttttcacccacaccagagggaggaagtgcttgagtgggagttcctcaccggg
aagtacattttttctgccttggatgggcagcccccacgtcgtggcatggactcatcccag
aaaatagcactggacgacatcataatgcaggttatggaaatgatcaatgccaatgcaaag
acgcgagggagagtcatcgacttcaaagagattcagtatggctaccggagggttaatcca
atgtatggagccgaatacgtgcttgacctgttgctactttacaaaaagcacaaagggaag
accatgacggtacctgtcaggagacacgcttatcttcagcaaaccttcagtaagatccac
ttcttggaagaggacgagatggatgctcaagcactggctgcacggatcaaccagggatca
gactcgctgtccttcctctccagctcccttaagaagtttgtgcctttcaagcttagcggc
tcaagcgcagaccagcaagaacccaaagagaagaaagtcaacattcttgtgccgctggcg
ggacgttatgagatatttgtacgctttatggcaaactttgagaagatctgccttattcca
aaccagaatgtcaggctgctgattctcctctttagcacagacaacaacactgagcgcatg
aagcagatcgagttgatgcgagagtatcgtttgaaatatcccaaagcagacatggagatc
gagcccgtctccggccccttctcccgcgccctggccctggaggtcggctccgcccatttc
agcaacgactccttgcttttctactgtgacgtggacttattgtttacagccgatttcctc
aagcgctgtcgtgcaaacacggtattaggggaacaaacctactttccgatcatctttagc
cagtacgacccaaaggttgtctacgcgggaaaagtaccaagcaacaaccactatgtgttc
acatccaaaacaggtttgtggaggcactttggcttcggcattgtctgtgtgtacaaagga
gacctggttaaagcgggtggctttgacgtctctatccaagggtggggaatggaagatgtg
gacctctttaacaaatttgtccagtcagggattaaactgttcaggagcacagacactggc
atagtgcatgtacatcaccctgtcatatgtgaccccaacttagatcccaaacagtacaag
atgtgcctgggctccaaagcttcatcgcatggttcaacacagcagctggctgagctgtgg
ctggagaagaatgaccatggcttccgaaggatctctagttcaaacaatggctcaatgagg
acagcatag
DBGET
integrated database retrieval system
