Tachysurus vachellii: 132855431
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Entry
132855431 CDS
T09596
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132855431
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132855431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-RING_6
Fib_alpha
Zn_ribbon_SprT
zf-RING_5
LMBR1
U-box
Prok-RING_4
zf-RING_10
MAD
DUF4407
UPF0242
Motif
Other DBs
NCBI-GeneID:
132855431
NCBI-ProteinID:
XP_060740357
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Position
12:complement(1347702..1350621)
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AA seq
561 aa
AA seq
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MAKASISVDQDQFICSVCLDLLNDPVTIPCGHSFCTVCINDCWDQEDQKDVYSCPQCRDT
FTPRPVLRRNNMLAEVVEKLKKTEVQAASPDHCYAGPGDVECDFCTGRKHKAVKSCLVCV
ASFCETHLKPHYLSHAFIKHTLTEASTKLHKKICSKHDKLMEIFCRTDQTCICYLCTMDK
HRGHDTVTAAAGRVEKQHELKKEQMKFQQRLQEKQKKVQELKQTVNTIKLSAQTAVEDNE
RIFTELISSMEKKRSEVTEMIRAQEKAELSRTERLLEQLEQEIDDLQRRVTEMEKLSHTH
DHIHFLQALASGPQSPLLNKPDFDTSSISVPQHLSFDGVKNSLSDLKKRLEEFCEEEFNK
IPPHAAAMEKTISPPEPESREDFMKYFCSLTLDPNTANCNIRLGKKNRAVRYSMKKMTYS
YDPERFDCFAQVLCKESLCGRCYWEVEWSGDGGVYISVSYKDISRKGRGDECVFGRNKNS
WCLYCSSSSLSFYHNNIKTELRVPSSSRIGVYVDHSAGTLSFYSVTHTVRPVHRVHTTFT
QPLYAGFWAGISSALRLYDPQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcgagtatttcagtagatcaggaccagttcatctgttcagtgtgtcttgat
ctcctgaatgatccggtaactatcccctgtggtcacagtttctgtactgtgtgtattaat
gactgctgggatcaggaggatcagaaggacgtctacagctgtcctcagtgcagagacact
ttcacaccaaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactg
aagaagactgaagtccaagctgcttctcctgatcactgttacgctggacctggagatgtg
gagtgtgatttctgcaccgggagaaaacacaaagccgtcaagtcctgtctggtgtgtgtg
gcttcattttgtgaaactcatctcaaacctcactatctatctcatgcttttataaaacac
actttaactgaagcctcaacaaaactacacaagaagatctgctctaaacacgacaagctg
atggagatcttctgtcgtacagatcaaacctgcatctgttatctgtgtacgatggataaa
cacagaggacacgacaccgtcacagccgcagcaggaagagttgagaaacagcatgagcta
aagaaagaacagatgaaattccagcagagactccaggagaagcagaagaaggtgcaggag
ctgaaacagactgtgaacactataaagctcagtgcacagacagcagtggaggacaatgag
aggatctttactgagctgatcagctccatggagaaaaagcgctcggaggtgacggagatg
atcagagctcaggagaaggctgaactgagtcgaactgaacgactcctggagcaactggag
caggagattgatgatcttcagaggagagtcactgagatggagaagctttcacacacacac
gatcacatccatttcctccaggctttagcttctggacctcagtctcctctattaaacaaa
ccagattttgacacgtccagcatcagtgtccctcaacatctgtcatttgatggagtgaag
aattctctctcagatctgaagaagagactggaggaattttgtgaggaggaattcaacaaa
atccctccacatgctgcagcaatggagaagacaatttcaccaccagagccagaaagcaga
gaagattttatgaaatatttctgttctctgactctggatcccaacacggcaaattgtaac
attaggctgggtaagaagaacagagcggtgagatacagtatgaaaaagatgacatactct
tatgatccagagagatttgattgctttgctcaggtgttgtgtaaggagagtttgtgtgga
cgctgttactgggaagtggagtggagcggtgatggaggtgtgtacatatcggtctcgtat
aaagacatcagcaggaaaggacggggtgatgagtgtgtgtttggacgcaacaaaaattcc
tggtgtctgtattgttcttcttcttctctctctttctatcataacaacattaagactgag
ctcagagttccatcatcctccagaataggagtgtatgtggatcacagtgcaggaactctg
tccttctacagcgtcactcacacggtgagacctgtccacagagtccacaccacattcact
cagcctctatatgctgggttctgggctggtatttcatcagctctgaggttgtatgatcca
caataa
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