Tachysurus vachellii: 132855604
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Entry
132855604 CDS
T09596
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132855604 (ssrp1a)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132855604 (ssrp1a)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
132855604 (ssrp1a)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
132855604 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Crystall_2
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
132855604
NCBI-ProteinID:
XP_060740674
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Position
13:complement(21178238..21191830)
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AA seq
704 aa
AA seq
DB search
MGDTLEFNDIYQEVKGFWNDGRLRFSKQSVSYKSSKTGKVDSIQAHDVSHAQWRRVCLGH
GIKLTTSNGHVYKYDGFKDTDFEKISAFFKSNYKVELTEKDMCVKGWNWGTAKFSGPLLT
FDVNESPAFEIPLANVSQCTTGKNEVTVEFHQNDDTEVSLMEVRFYVPPSTGDDGTDPVE
VFAQNVLTQADVIQATGDAVCIFKELQCLTPRGRYDIRIYPAFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDVNLTLSMSEEEVERRFE
GKLNKHMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKATSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGLKEDLKATERYSDSDEDEHDAYLERMKEEGKIREEGDESEGDSDESFNPV
EEDDDIAEEYDSNASVSDSEDEDDDSEDEGKKKKVEKKPKKPVKEKKERKPRKEKKVKDA
GAPKRPMSAYMLWLNANRERIKSENPGISVTEISKKAGEMWKQIDKNRKEEWERKAEEAK
KQYERAMKEYKESGGGASSSAVSSEKKKKVGKAEEKKRKSVVEKERDKGGNESFKSKEFI
SSEESSSDSDRGKGKKRKAAKDDDEDEEEVASTPPSSEEESGSD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctggagtttaacgacatttatcaggaggtgaaaggattctggaatgac
ggcaggttgaggttcagcaaacagtctgtgagctacaaaagcagtaagacaggaaaagtg
gacagtatccaggcccatgatgtgtctcacgctcagtggcgtcgtgtctgtctgggacat
gggatcaaactgaccacaagcaatggtcacgtctacaaatatgacgggtttaaagacacg
gactttgagaaaatctccgccttttttaagtccaactacaaagttgagctgacagaaaag
gacatgtgtgtgaaaggatggaactggggaactgctaaattctcagggccgttgctgacg
ttcgacgtcaacgagagtccggcgttcgagatcccgctggctaacgtgtcccagtgcacc
acagggaagaacgaggtcacggtggagttccatcagaacgacgacacagaagtgtcgctc
atggaggtccgcttttacgtcccgccctccaccggagacgacggcacggaccctgtagag
gtctttgcccaaaatgttctcactcaggcagatgttattcaggctaccggagatgctgtg
tgtatcttcaaagaattgcagtgccttacacccagaggaaggtacgatattcgtatctat
cccgcattcctacatcttcacggcaagacgtttgactataagatcccctacactaccgtc
ctgcgcctcttcctgctgccgcacaaggaccagcggcagatgttcttcgtgatcagcttg
gatccacccattaagcagggccagacacgttatcatttcctcatcctcctcttctccaaa
gatgaagacgttaaccttactctcagcatgagcgaggaggaggtggagaggcgctttgag
ggaaagctgaacaagcacatgtccggctctctgtacgagatggtcagcagggtcatgaag
gctctggtcaacagaaagatcacggtgcccggaaacttccagggtcattcaggtgctcag
tgtatcacctgctcatacaaagctacctcagggctgctgtatcctttagagaggggcttt
atttatgtgcacaaacccccagtgcacctgcgcttcgaggagatctcctgcgtgaacttc
gcccgaggcaccaccaccacgcgctccttcgacttcgagatcgagaccaagcagggcaac
cagtacaccttcagcagcatcgagagagaggaatacggcaaactgttcgactttgttaat
gccaagaagctgagcatcaagaacagaggcttaaaggaggacttaaaggcaactgaacgc
tacagcgactcggacgaggatgagcacgatgcttatttggagaggatgaaggaggagggt
aaaatcagagaggagggtgacgagtcggagggtgacagcgacgagtccttcaatcctgtt
gaggaagatgatgatattgctgaagaatacgacagcaatgcctcggtgagcgacagcgag
gatgaggacgatgacagcgaggacgaagggaagaagaaaaaagtcgagaagaagcccaag
aaacctgtgaaagagaagaaggagagaaaaccacgcaaagagaaaaaggtgaaagacgcc
ggcgcccctaaaagacccatgagcgcctacatgctgtggttgaatgcgaacagggagcgg
atcaaatccgagaaccccggaatctcggtcacggagatctccaagaaagccggcgagatg
tggaagcagattgataaaaaccgcaaggaggagtgggaaaggaaggcagaagaagctaaa
aaacaatacgagagagcaatgaaagaatataaagaaagtggcggaggagcttcatcatct
gcggtcagcagtgaaaagaagaagaaagtcgggaaagcggaggagaagaaaaggaagagc
gtcgtagagaaggagcgagacaaaggaggcaacgaaagctttaagagcaaagagttcatt
tcaagcgaggagagctcgtcagattcagatcgcggcaaaggcaaaaagcgcaaggctgct
aaagacgatgatgaggacgaggaagaagttgcatctacacccccaagctcggaggaagag
tctggctctgactga
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