KEGG   Tachysurus vachellii: 132855691
Entry
132855691         CDS       T09596                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
tvc  Tachysurus vachellii
Pathway
tvc03420  Nucleotide excision repair
tvc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    132855691 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    132855691 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tvc04121]
    132855691 (cul4b)
   03400 DNA repair and recombination proteins [BR:tvc03400]
    132855691 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tvc04147]
    132855691 (cul4b)
Ubiquitin system [BR:tvc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     132855691 (cul4b)
DNA repair and recombination proteins [BR:tvc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      132855691 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      132855691 (cul4b)
Exosome [BR:tvc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   132855691 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 132855691
NCBI-ProteinID: XP_060740839
LinkDB
Position
13:13503869..13515628
AA seq 860 aa
MFPTGLPSPNPPAPSQEARAAASDVSSDSSLTPCRKRKILCSDREDTDSVSASPRSPKAA
CNSSASCSSSSSSSSSSQHIQKKLRFEGRSECTGLDVKMAEESPTASCSKAKSAFFSGHA
NGLTKSAGSATFTTNSKPGAAKKLVIKNFKEKPKLPENYTRETWQKLKDAVEAIQNSTSI
KYNLEELYQAVENLCSHKISAKLYKQLRLVCEDHIKAQIDEFREDSLDSVLFLKKIDKCW
QDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRSYIISDWKVQSKTIDGILLL
IERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEY
LHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLNHLLDENRIQDL
SLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDSIIDIC
FMKNEKFVNAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMII
FRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDME
LSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPAEMVRLQEIFKTFYL
GKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKLATGI
EDGELRRTLQSLACGKARVLTKTPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVE
EQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESL
IDRDYMERDKENSNQYNYVA
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttaccttcccctaatcccccagcgccaagccaagaggccagagcg
gcagcttcggatgtgagcagcgacagcagcctgacgccttgcaggaagaggaagattctc
tgctccgacagagaggacactgattccgtctctgcgtctccgagatcccctaaagcagcg
tgcaattcctctgcgtcctgctcttcctcctcctcctcctcctcctcctcgcagcacatc
cagaagaagttgcggttcgaggggcgctcggagtgcactgggctggatgtaaagatggca
gaagaatctccgaccgcgtcgtgctccaaggcgaaaagcgcttttttctccggtcacgca
aacggactcaccaaatccgccggatccgcgacattcaccaccaatagcaaacccggagct
gctaagaaacttgtgatcaaaaactttaaggaaaagccaaaattgcctgaaaactacaca
cgtgagacatggcagaagctgaaggatgcagtggaagccattcagaatagcacgtcaata
aagtacaatctggaggaactttatcaggctgttgagaatttgtgctcccataagatatct
gccaagctgtataagcagctgagattggtttgcgaagaccacattaaggcacaaatcgat
gagtttcgagaggactctctggacagtgtgctattcttgaagaaaatagacaagtgttgg
caagatcactgcagacagatgatcatgattaggagtatatttttgtttttggatcgcaca
tatgttttacaaaattcaatgctgccatcaatctgggacatgggactggagttgtttcgt
tcctacattatcagtgattggaaagtacagagcaagacgattgatgggatcctactcctc
atagagagagaacgcaacggggaggccatagaccgctctctcttgagaagtctgctgagc
atgctgtctgacctccagatttatcaagattcatttgagcaacgctttctggaggagaca
aatcggctgtatgctgcagaaggtcagaggctgatgcaggaaagagaggtgcctgagtat
ctccatcatgtaaacaaacgcttggaggaggaagcagacagagtcatcacatacttggac
cagagcacacaaaaacctctcattgccactgtggagaagcagttacttggtgaacatcta
acagcaacacttcagaaagggttgaatcatctgctggatgagaatcgtatccaggacttg
tctttgctgtatcagctgtttagtcgagttcgggggggagtgcaggtccttctgcagcac
tggattgagtacatcaaggccttcggtagcacaatagtaatcaatcctgagaaagacaag
acaatggtgcaggaactgctggacttcaaagataaagtggactccatcattgatatatgc
ttcatgaagaatgaaaaatttgtaaatgccatgaaggaagcttttgagaccttcatcaac
aaacggccgaacaaacctgcagagctcatagcaaaatatgtggattcaaaactgcgggca
ggaaataaggaagccacagatgaagaactcgagaagatgctagacaagattatgatcata
ttcaggtttatttatggcaaagatgtgtttgaggccttctacaaaaaagacctggcaaag
aggttgctggtcggaaaaagtgcctccgtcgatgctgagaagtcgatgctctcaaaactg
aaacatgaatgtggagcagcttttaccagtaaattggaaggaatgttcaaggacatggag
ctctcaaaagatattatggtgcaattcaaacagtacatgcaatgccagaatatcccagga
aacattgagctgaccgtgaacattctcactatgggttactggccaacatacgtccccatg
gaagttcatctgcctgctgagatggtaagactacaagaaatctttaagaccttttatctt
gggaagcacagtggaagaaaactacagtggcagtcgacattaggacattgtgtattaaaa
gctgaatttaaggaggggaagaaagagctgcaggtgtcactgtttcagacattagttctg
ctcatgtttaatgagggagaagaattttccttggaagagatcaaactggccacaggaata
gaggacggagagctgaggcgtaccctccagtccctggcttgtggcaaggcgagagttctc
accaaaacccccaaaagtaaagacgtggaagatggagacaagttttcctgcaatgatgat
ttcaagcacaagctcttcaggattaagatcaaccagatccagatgaaagaaacggtggag
gagcaggcaagcactacagagcgagttttccaggaccggcaataccagattgatgctgcc
atcgtccgcattatgaagatgaggaagactttgagtcataacctccttgtgtctgaggtt
tacaaccaactcaagttccctgtgaagcctgctgatttaaagaagaggatagagtcgctc
atcgatagagactacatggaaagagacaaggagaattctaatcagtacaattatgtggct
tag

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