KEGG   Tachysurus vachellii: 132855735
Entry
132855735         CDS       T09596                                 
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
tvc  Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tvc04121]
    132855735 (rlim)
Enzymes [BR:tvc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132855735 (rlim)
Ubiquitin system [BR:tvc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132855735 (rlim)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING_16 zf-RING_4 zf-RING-like
Other DBs
NCBI-GeneID: 132855735
NCBI-ProteinID: XP_060740901
LinkDB
Position
13:complement(17387385..17394741)
AA seq 633 aa
MEGSDNAEQGSSEQADSQRRQQQDRLNREEAFYQFVNNLSEEDYRLMRDNNLFGTPGEIT
EEELLNRLHQARDGPEQPHSSSSNNSPEVSRGEPRVSEAEGTEEASNGDTLLDWLNTVRQ
TGNTTRSGHRGNQSWRAVSRTNPSSGDFRFSLEININRNIAEQQTQTEADRPEAEQSNAN
APVPEPETPMEAAEVVEEPVVEEMAVVVEPELPAPSSPAATRPTSPQNQVPLSPSPPPVE
RPSRGQIRARSPSPEQRRTRARTARSHLALSLDQLDGLPQARHGLPSRSPDPVPEVQVGS
SYRTRLHAFSRQNIQLESEETVATTEPQPAPQPPQETEASSGEAGASARRPPTIMLDLQV
RRVRPGEYRERDSIANRTRSRSQTSNNTFLYETERGGFRRTFSRSERAGVRTYVSTIRIP
IRRISDAGLGEATSMALQSMIRQIMTGFGELSYFMDSDSDSTDSSRGSNPAADLADALGN
PDAGSPSTEPSPGVGGSNPSGSEAQTEEREDSGASLRESRARQRPPISLEDSGSLPFLRL
AHFFLLNDDDDDQPRGLTKEQIDNLAMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHE
YHVHCIDRWLSENSTCPICRRAVLVSANRESIV
NT seq 1902 nt   +upstreamnt  +downstreamnt
atggagggctcagacaatgcagagcagggcagtagtgaacaggccgattcacaacgcagg
caacaacaggaccgtcttaatagagaggaagccttctaccagtttgtgaacaatctgagt
gaggaggactacaggctgatgagagacaacaatcttttcggcacaccaggtgaaattact
gaggaggagttgttgaaccgccttcatcaagctagggatggccccgaacagccacacagt
agcagcagcaacaatagtcctgaagtcagcaggggggagcccagagtttcagaggcagag
ggtacagaagaagcatctaatggtgacacccttcttgactggctcaacactgtgcgtcaa
acgggcaacaccacaagaagtgggcaccggggcaaccagtcatggcgggcggtgagccga
accaatccaagtagtggagacttccgcttcagcttggaaataaatataaatcgcaacata
gctgagcagcaaacacagactgaagctgatcggccagaagcagagcaaagcaatgctaat
gcccctgtacctgaacctgagacacccatggaggcagcagaggtggttgaagagccagtg
gtggaggagatggctgttgtagttgaaccagagcttcctgcacctagtagcccagctgca
acccggccaacaagcccacaaaatcaggttccactttctccaagtccccctccagtagag
aggccaagtagaggccagattagagctcgtagtccaagcccggaacagcgcagaactagg
gcgcgaacagctaggagtcatttagctctcagtctagaccagttagatgggcttccacaa
gcacgccatggactaccctctcgaagtcctgatccagtcccagaggttcaggtaggcagc
agctacaggacccgactacatgctttttctcggcagaatatacagttagaaagcgaagaa
accgttgcgactacagagccccaaccagcacctcagcctccccaggaaactgaagcatct
tcaggagaagcaggtgcttcagctcggcgtcctccaacaataatgctggacttgcaggtt
cgtagggtgcgaccgggcgagtatcgtgagagagacagcattgccaaccgcacccgctct
cgatcacagacctccaataacactttcttgtatgaaactgagcgtggtggcttccgcagg
accttttcacgttcagagcgagcaggtgtgaggacgtatgtcagcactattcgcattccc
atcaggaggatctctgatgccggacttggtgaggccacctccatggccctacaatccatg
atccggcagatcatgactggctttggtgaactcagctacttcatggactctgactcggac
tccacagactcaagccgtggctccaatcccgcggcagatctggccgatgctctgggaaat
ccagatgctggaagtccttcaactgagccatcacctggggtaggaggctcaaatccgagt
ggctcagaagcacagactgaagaaagggaggacagtggtgcatctctcagagagagcagg
gcgaggcaacgacctcctatcagtctagaggattctggctctttgccctttctgcgactt
gcacatttcttcttgctcaatgatgatgatgatgatcagcccaggggcctcaccaaagag
caaatcgataacctcgccatgcgcaatttcggtgagagtgatgcactcaagacatgtagt
gtctgcattacagagtatgctgaaggcaacaagcttcgtaaacttccctgctcacatgag
taccatgtgcattgtattgaccgttggctttcagagaattcaacttgccccatctgtcgc
agggcagttcttgtgtctgctaacagagagagcattgtctag

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