Tachysurus vachellii: 132855751
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Entry
132855751 CDS
T09596
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
tvc03015
mRNA surveillance pathway
tvc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132855751 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
132855751 (eif4a3)
03015 mRNA surveillance pathway
132855751 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132855751 (eif4a3)
03041 Spliceosome [BR:
tvc03041
]
132855751 (eif4a3)
03009 Ribosome biogenesis [BR:
tvc03009
]
132855751 (eif4a3)
03012 Translation factors [BR:
tvc03012
]
132855751 (eif4a3)
Enzymes [BR:
tvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132855751 (eif4a3)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132855751 (eif4a3)
mRNA cycle factors
Stress granule specific factors
132855751 (eif4a3)
Spliceosome [BR:
tvc03041
]
Complex C
Other components
EJC/TREX
132855751 (eif4a3)
Ribosome biogenesis [BR:
tvc03009
]
Eukaryotic type
90S particles
Helicases
132855751 (eif4a3)
Translation factors [BR:
tvc03012
]
Eukaryotic type
Initiation factors
eIF-4
132855751 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
132855751
NCBI-ProteinID:
XP_060740927
LinkDB
All DBs
Position
1:complement(35949463..35954626)
Genome browser
AA seq
406 aa
AA seq
DB search
MAAAPVSGRKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVA
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcacctgtaagtgggaggaagcgactcctgaaggaagaagatatgactaaa
gtggagtttgagaccagtgaggaggtcgatgtgacgccgacgtttgatacgatgggcctg
agggaggatttactccgtgggatctacgcttacggttttgaaaaaccatcagctattcag
cagagagccattaaacagatcataaaggggagagatgtcattgctcagtcacagtctggt
actggaaaaacagccacattttgtgtatcagtgctgcagtgtctggacattcaggtgcgt
gagacccaggcgctaattttggctccaaccagagagttggctgggcaaattcaaaaggtt
ctccttgctctgggtgactacatgaacgtccagtgccatgcctgtataggtggcacgaat
gtgggtgaggacatcaggaaacttgactatggccaacatgttgtagcaggaaccccgggc
agagtttttgatatgatccgtcggagaagtctgaggacacgtgccatcaagatgttggtt
ctggatgaagctgatgaaatgcttaacaaaggtttcaaggagcagatttatgatgtctac
cgatacctgcctcctgctactcaggtggttctaatcagtgccaccttaccacatgagatc
ctggagatgaccaacaaattcatgacagaccccattcgcatcttggtcaagcgtgatgag
ttgacactggagggcataaagcagttctttgtggctgtggagagagaagagtggaagttc
gacacactgtgtgatctgtacgacacactgaccatcacgcaagccgtcatcttctgcaac
accaagcgaaaggtggactggctgactgaaaagatgagggaggcaaatttcaccgtggcc
tctatgcatggagacatgccccagaaagaaagagagtccattatgaaggagttccgatct
ggagcaagccgagtgctgatctcgacagatgtgtgggctagagggttggacgtaccacag
gtctctcttatcatcaactacgatctgcccaacaacagagaattgtacatccacagaatt
ggacgatcaggtcgttatggccgtaagggtgtggccatcaactttgtaaagaacgacgac
atccgtatcctccgtgatattgagcagtactattccacacagattgatgaaatgccaatg
aacgtggctgatctgatctga
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