Tachysurus vachellii: 132855958
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Entry
132855958 CDS
T09596
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc04110
Cell cycle
tvc04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132855958 (smc1b)
04114 Oocyte meiosis
132855958 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132855958 (smc1b)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
132855958 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
132855958 (smc1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
132855958
NCBI-ProteinID:
XP_060741245
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Position
13:3337053..3348642
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AA seq
1234 aa
AA seq
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MGYLKQIDVENFKSWKGKQTIGPFKSFTCVIGTNGSGKSNVMDALGFVMGEKASSLRVKQ
TKDLIYGAHVNKPVSRTASVTMCFCDDNDEETTFSRTISGESSEYRVNGRQVTPSRYRAE
LENIGIVVKARNCLVFQGAVESIAMMNAKEHTKLFERISNSIELANEYDTKLAALQKAKE
DTQFHFNRKRAATAEKKQVFKDKTEAEKYQALVEQLGESKLHLSLFQLYHNERRINALLE
FMREKQEAVTVKKSIVEDWEQSVKAQKKEHGRLNRELQKLEKEIKSQEETLSQQRPHYIR
AKVNTSHHQRKVEETCTSLLKTQRQQAKKEQELQELETELAELEKAWRVYETEIAEQAAQ
RGEDVQLEEAQLERYKELKELTRKKGAILLQKAEKLHWEVKADREKLEFDKRRTSEVETN
IKHAEEHLDELNRKAEKLEEYAITSNKALDEQLEQERCLRETLERGRLRILEVNEELGMV
GQELQSARMDSQENRKQQKRDELFQSLRRLYPDVVYGRLMDLCQPIHKKYQLAVTKVFGH
YMNAIVVSTAKVARDCIQIIKEERAERETFLPIDNLDVKPLNERLREVRGAKMVVDVVQC
SQNAPQLKRVVQFVCGNSLVCENLKDARHVAFDGPERLKTVSLDGTLFSKSGVISGGSVH
LRHKARRWEEKDMNGLKERKEQLNAELRELIKLKRKEAELHQITAQAHGIQTRLKYSNSE
LESIRKKIIPTRQSEISRLQSELSNMKSQIEMQTNNVQVNDSRVSALQDEINHMEDTVFS
DFCAEIGVANIREYEQDYVRQQGEIENKRLQFESQRTRLNTQLEYEREQLHKQRRLISKI
EDSIKKEEDVVLMLKKEEEKLLVAVDESQCKLQDLKNKQAEQKSCINKAKAELDKRISVH
QENSRELTKQQKEMISVETALEHQKLCKHNLLLGCKIEGLPLTVLSGTLDDISDIELDSD
SVSITTQSIYEREAQILIDYRHLGDNLKSLTEEQEVMSQLEVLTEQVSSLEKLIHMSKPP
NMKALEKMSEVKDTFRGVADAFEASTSVAKKCHKEFEQVKAMRFHRFSQCFEHVSVTINH
IYKDLCRNDSAQATLIAENPDEPYLGGISYNCVAPGKRFMSMDNLSGGEKSIAALALVFA
IHSFRPAPFFVLDEVDAALDNTNIGKVTSFIREQSRNNFQVIVISLKEEFYSRSDALLGV
YTKFNDWMSSHLLSLDLTPYPLNDENGEEPERWT
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgggctacttaaagcagatagacgtggaaaatttcaagtcatggaaaggaaagcagaca
ataggtccgtttaaaagcttcacgtgcgtcattggaactaacggttcaggtaagtcgaat
gtgatggacgctctggggtttgtgatgggagagaaagcctccagtctgagagtgaagcaa
accaaagacctgatttatggcgcccacgttaataaaccggtctcccggaccgcgtcggtc
actatgtgcttctgcgacgataacgacgaagaaactaccttcagccgaactatatcaggt
gagtcctcggagtaccgagtcaacggcaggcaggtgacaccgagtcggtacagagccgag
ctggagaacataggcatcgtagtgaaagccaggaactgcttagtgtttcagggtgcagtg
gagtctatcgctatgatgaatgcaaaggaacatacaaagctgtttgaacgcatcagtaac
tccattgagttggcaaacgaatacgacaccaagctagcagcactgcagaaagcaaaagag
gacacgcagttccattttaatcgcaaacgggcagccactgcagagaagaagcaggtgttc
aaggataaaactgaggcagagaaatatcaggcactggtggagcagctcggtgaaagcaag
ctgcacctcagccttttccagctttatcacaacgagaggcgtattaatgcactcctggag
ttcatgagagagaaacaggaagctgtcactgtcaaaaagagcatagtggaggactgggag
caaagtgtgaaggctcagaagaaagagcacggacgcctaaaccgagaactgcagaaacta
gagaaggagatcaagtcccaggaggaaaccctcagccagcagaggcctcattacatcagg
gccaaagtgaacaccagtcaccaccagcgcaaggtcgaggaaacgtgcaccagtctgctg
aagacccaaaggcagcaagccaagaaggaacaggagctgcaggaactggagactgagctg
gccgagctagagaaggcctggagagtttatgagacagagatagcggagcaggctgctcag
aggggcgaggacgtgcagcttgaggaagctcagctggagcgttataaggagctgaaggaa
ctgaccaggaaaaaaggggccatcttattacagaaagctgagaaactacactgggaggtg
aaggctgatcgggaaaagctggaatttgacaaaaggcgaacaagtgaagtcgagacaaac
attaagcatgctgaagaacatctggacgagttaaacaggaaggcagagaaactggaggaa
tatgccatcacctctaacaaagctctggatgagcagctggagcaggaacggtgcttgagg
gagacgttggagcgtggacggttgcggatactagaagtgaacgaagaactgggcatggta
gggcaggaacttcagagcgctcgcatggatagccaggagaatcggaaacaacagaaacga
gacgagctctttcagagcctgcgtagactctacccggacgttgtgtacggacgattgatg
gacttgtgtcagccaatccacaagaaatatcagcttgctgtcacaaaggtgttcggtcat
tacatgaacgccattgtggtgtctactgcaaaagtggcccgtgactgcattcagattata
aaagaggagagagctgagcgagagaccttcctccctatcgacaacctggatgttaagccg
ctaaatgagcgtctccgggaggtccgtggggccaagatggtggtggatgtggtgcagtgt
tcccagaatgcaccacagttgaagagagtggtgcagtttgtgtgtggaaattcccttgtg
tgtgagaatctgaaagatgcccgccatgttgcttttgacggcccagagcgccttaagact
gtgtctttggatggtaccttgttctccaagtcgggggtgatctctggtggctccgttcac
ctgcggcataaagctcggcgctgggaggagaaggacatgaatggcctgaaagagcgaaag
gagcagcttaatgcagagctaagggaattaataaaactgaaacgcaaggaggctgagcta
catcagatcacagcccaggcccacggaatccagactcgcctcaaatactctaactctgag
ctggagtccatccgcaaaaaaatcatcccaacccgtcagtctgaaatctctagactgcag
agtgagctctcaaacatgaagtctcagatcgagatgcagaccaataatgtgcaagtgaac
gacagtcgggtgtcagccctccaggacgaaatcaatcacatggaggacacagtattctca
gacttctgcgctgagattggagtagccaacattcgtgagtacgagcaggattatgtgaga
cagcaaggagagatcgagaataagcggctgcagtttgagtcgcaacgcactcgtctgaac
acacagttggagtatgagcgggagcagctgcacaagcagcgcaggctgatcagcaaaata
gaggactccatcaagaaagaggaagatgttgtcctcatgttaaaaaaggaggaagagaag
ctgcttgttgcagtagacgaatctcagtgtaagctccaagacttaaagaataagcaggca
gaacagaagtcttgtattaataaagcgaaggctgagctggataagagaatcagtgtccat
caagagaactccagggaactaacaaagcagcagaaggagatgatctctgtggaaactgca
ttggagcatcagaaactttgcaaacacaacctactcctgggctgcaaaattgagggcctg
cctctcacagtgctttcgggaacactcgacgacatcagtgacatcgagctggactctgat
tctgtaagcatcactacacaaagcatttatgagcgagaagcacagattctgattgattat
agacatctgggagataatctgaagagtctgactgaggagcaggaggtgatgtcccagctg
gaggtgctgacagagcaagtgtcgtctctggagaaattgatccatatgtccaaaccaccc
aatatgaaggccttggagaagatgagtgaggtgaaggacacgtttcgtggtgtggctgat
gcatttgaggccagcacaagtgtagctaagaaatgccataaggagtttgagcaagtgaag
gccatgcgcttccatcggttcagccagtgctttgagcacgtttctgtcaccatcaaccat
atttacaaagacctctgcagaaatgacagtgctcaagcgactctgattgcagaaaatcct
gatgagccatacttgggtggtatcagttataactgtgtggctcctggcaagagatttatg
tccatggacaacctgtcaggaggagagaagtccattgcagcactcgctctggtgtttgct
attcacagtttccgtcctgctccattctttgtgctggatgaagtggatgctgctttggac
aacacaaacattggaaaggtgacaagctttattagggaacaatccagaaataactttcag
gtcattgtcatctcactgaaggaggagttctattcacgctcagatgctctgctgggagtc
tacactaagttcaatgactggatgtccagccacctcctgtcactggatctcactccatac
cccctcaacgacgaaaatggtgaagagccagagagatggacatga
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