Tachysurus vachellii: 132855999
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Entry
132855999 CDS
T09596
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132855999 (pcdh10b)
Cell adhesion molecules [BR:
tvc04515
]
Cadherins
Protocadherins
132855999 (pcdh10b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
132855999
NCBI-ProteinID:
XP_060741317
LinkDB
All DBs
Position
13:complement(24072977..24096998)
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AA seq
1055 aa
AA seq
DB search
MNYADMEMLLLWLVLCLAHRVASQIRYSVPEETERGTFVGNIAEDLGLDLTKLASRRFQT
APGSRGSPYLDVNVETGTLLVRERIDRERVCKQSASCVLHLEVFLEDPLELFRVEVEVTD
VNDNAPSFPESDVTVEISESATPGTRFPLEAAFDPDVGSNGLRTYEITANGHFALDVQTQ
TDGNKFAELVLEKPLDREQQAVHRYVLTAVDGGQPARTGTALLVVRVLDSNDNVPTFDRA
VYSASLSENAPAGTLVIQLNATDSDEGSNGEVVYSFGSHVSSRARELFDVDARTGRIEVR
GEVDFEESSLYQLYVQAKDMGPNAVPAHCKVLVKVTDVNDNAPEIAFSTVTESVSENAAP
GTVIALLSVTDKDSGDNGRTRVEILGDVPFRLKSEFGNYYTVVTDGPLDREVAEAYTVTV
TARDGGAPPLISSKSVEVRVSDENDNAPTFSQPVYDVHVTENNVPGAYIFAVSARDPDAG
DNSRVTYSVLDRDIKGMSVLTYVSVNTENGYLYALRSFDYEQLKEFSFTVEARDAGSPEL
HSNATVHVVVVDQNDNAPTVIAPLGKNGTAREPLPRSAEPGYLVTRIVATDADDGENARL
SYSIQRGNEDGLFRMDWRTGELRTARRVSAAKRDAQQHQQRSLYELLVEVRDHGQPPLSC
SAVVQVALVDGLPAAASAEGRGGGGERERGGTARTKDVSLDLTLILIVALGSVSFVFLLA
MIALAVRCRKDKKLNVYAGCNASCCFCCGRQARSSRGVSSGNGVSKKKQKKQKKLSKSDI
MLVQSANSADVSAHAGVGCGVGSAQVPVEESGSFGSLRRGQNYCYQVCLTPESANTDLLF
LKACGAGASRATTDTEHSPRGGIHTAYTEQQQPDIISNGSLLSSETKHQRAELSYLVDRP
RRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATHRGHSSGADLFSNCTEECKALGHSDR
CWMPSFVPTESRQGADYRSNLHVPGMDAVPDSEVFEGDAFTGDQSFSTFGKEPLHTYQHQ
QHLQASTLDTRELHALLSNSRTPYKANYLSRKRIC
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgcagacatggagatgctcttgctttggctcgtgctgtgtctggcgcacagg
gtcgcctcgcagattcgttactcggtaccggaggagacggaacgtggcacgttcgtgggc
aacattgccgaggacctggggttggacctgactaaactggcttcccgccgtttccagacg
gcaccgggctcacgcgggagcccgtacctggacgtgaacgtggagaccggcacgctgttg
gtgcgagagcgcatcgaccgggagcgcgtgtgtaagcagagcgcgtcctgcgtgctgcac
ctggaggtcttcttggaggatccgcttgagctctttcgagtggaagtcgaggtgacggac
gtaaacgacaacgcaccgagcttcccggagagcgacgtcacggtggagatcagcgagagc
gccacgcccgggacgcgttttcctttggaagcagccttcgacccggacgtgggcagcaac
gggctcaggacgtacgagatcacagcaaacggtcacttcgcgctggacgtgcagacgcaa
acggacggaaacaagttcgcagagcttgtgcttgaaaagcctctggacagagaacagcag
gcggtgcaccgctacgtgctcacggcagtggacggcgggcaaccggcgcgtacgggcaca
gcgcttttggtggtgcgcgttctcgactcgaatgacaacgtgccaacgtttgaccgggcc
gtgtactcggccagcctgtccgagaacgcgcctgcgggcacgctggtgattcagctcaac
gccaccgactcggacgagggctcaaacggcgaggtggtttactcatttggtagtcacgtg
tcgagccgcgcgcgcgagctgtttgacgtggacgcgcgcacgggccgcattgaagtgcgc
ggcgaggtcgactttgaggaaagtagcctttatcagctctatgtacaggccaaggacatg
ggtccgaacgccgtgcccgcccactgcaaggtgctcgtgaaagttacagatgtcaacgat
aatgcacctgagatcgcctttagcaccgtgacggagtctgtaagcgagaacgcagcacca
ggcaccgtgatcgcgctgctcagcgtcactgacaaggactctggagataacgggagaaca
cgtgtggaaatcctgggcgacgtgccgttcagactcaaatcagagtttgggaactactat
actgtggtcacggacggccctctagaccgcgaggtggccgaggcatacacagtgacggtg
acggcgcgtgatggaggtgcgccgcctctcatctcgagcaagtccgtggaggtgcgcgtc
tcggacgaaaacgacaacgctcccacgttctcgcagcccgtttacgacgtgcacgtcaca
gagaacaacgtgcccggggcttacattttcgccgtgagcgcacgagatccagacgctgga
gataattccagagtgacctattccgttttggatcgtgacatcaagggcatgtccgtgctc
acgtacgtgtccgtgaacacagaaaacggctacctgtacgcactgcgctcattcgactat
gaacagctgaaggagttcagctttacggtagaggcgcgagatgctggaagccctgagctg
cactcaaacgccactgtgcacgtggtcgtagtggatcaaaatgacaacgcaccgaccgtg
atcgcgcctctgggcaaaaacgggacagccagagagcctttgccacgctcagccgaaccg
ggctacctggtcacacgtatagtggccacagacgcagatgatggtgagaacgcacgtctt
tcatacagcattcagcgaggaaacgaggacggtttattccgcatggattggcgcacgggg
gagttgcgcacggctcggagggtgtctgcagccaaacgggacgcgcagcagcaccaacag
agaagcctgtatgagctgctcgtggaagtgcgagatcacggccagcctcctctctcgtgc
agcgccgtagttcaggtcgctctggtggacggacttcctgcggcggcctcagcagaggga
cgcggaggaggaggagaacgtgagcgtggtggcacggcccgaaccaaagacgtgagcctt
gacctcaccctcattctgatcgtcgctctcggctcggtgtcgttcgtctttctgctcgcc
atgatcgccctcgctgtgcgctgccgcaaagacaagaagctgaacgtgtacgcaggctgc
aacgcgtcgtgctgcttttgctgtgggcgacaggctcgatcatcccgcggtgtcagcagc
ggcaacggcgttagcaaaaagaagcaaaagaagcagaagaaactcagcaagtcggacatc
atgctggtgcagagcgcaaactctgcagatgtgagcgcgcatgctggagtcggctgtgga
gtcgggagcgcgcaggtgcccgttgaagagtccggaagcttcggttcgctaagacgcgga
caaaattattgctatcaagtctgtctcactcctgagtccgccaacactgacctgctcttc
ctgaaggcatgtggagcgggagcgagccgtgcgaccacggataccgaacacagcccacga
ggagggatacacacagcatacacagagcaacaacaaccggacatcatatccaacgggagc
cttctgtccagcgagacgaagcaccagcgtgccgagctcagttacctggtggacaggccg
aggcgtgtaaacagctcggcgttccaggaggcagacatcgtgagctctaaagacagtgga
cacggagacagcgagcagggagacagtgaccatgacgccacgcatcgcgggcactcctcc
ggagcggatctattttcgaactgcacggaggagtgtaaggcgctgggccactcggaccgc
tgctggatgcccagcttcgtgcccacagagtctcggcagggcgcagactaccgcagcaac
ctgcacgtgcctggcatggacgccgtgcccgactctgaggtatttgagggtgacgcgttc
acgggcgatcagtcattctccacgttcggcaaagagccgctccacacataccaacaccaa
cagcacctccaagcctccacgctagacaccagagagctccatgcgctcctgtctaactcg
cgcacgccttacaaagccaactatctgtcgcggaaaaggatttgttag
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