Tachysurus vachellii: 132856108
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Entry
132856108 CDS
T09596
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
KO
K16482
centriolar protein POC1
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132856108 (poc1b)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tvc03037
]
132856108 (poc1b)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
132856108 (poc1b)
Cilium and associated proteins [BR:
tvc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
132856108 (poc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_DCAF4
eIF2A
Beta-prop_ACSF4
Beta-prop_Nup120_160
Tricorn_2nd
RMC1_N
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_2nd
Beta-prop_WDR75_2nd
PROPPIN
Cytochrom_D1
TolB_like
Tricorn_N
Beta-prop_WDR11_2nd
POLO_box
Rab11-FIP3
Motif
Other DBs
NCBI-GeneID:
132856108
NCBI-ProteinID:
XP_060741519
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All DBs
Position
13:2061477..2095881
Genome browser
AA seq
495 aa
AA seq
DB search
MPGAAMHGLDDPTLARHFKGHKDAVTCADFSPNNKQLATGSSDKTLMIWNLNPKSRAFRF
VGHQDIVTAVHFSPSGELVASGSRDKTVRLWTPNIKGDSTVFKAHTATVRSVNFSADGQK
LVTASDDKSVKVWSVHRQKFIYSLNQHTNWVRCARFSPDGRLVASCSDDRTVRLWDTSTR
LCINTFTDYTGPATFVDFNSSGTCIASSGADNTLKIWDMRTNKLIQHYQVHSAAINSFSF
HPSGNYLISGSSDSTVKIVDLLEGRLIYTLHGHKGPVLAVVFSREGDLFATGGCDGQVLM
WKTNFDALNYREMLSSHRKRVTPDPPPHLTDIFPRSPHVHLAHDSAVQINPVVPNIQSAH
PQVVDIGEDPFSLGAGRHTSWITDPSEHPSTSTGRNLDIFTDTHHREEALEEDDLEPRLT
DLQEERSVTSPALRSTLEHIVQQLDILTQTVAVLEERLTLTEDKLRECLDNQAVILEQMQ
QQPDKETRGAEGPAV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtgcggctatgcatggcctcgatgacccgacacttgcaagacattttaaaggc
cacaaagatgctgttacttgtgcagatttcagtcccaacaacaaacagctggccactgga
tccagtgataaaactctgatgatatggaaccttaatcccaaatccagagcgttcaggttt
gtcggacatcaggatatcgtaaccgccgtgcacttctccccatccggcgaactggtggct
tctggatcaagggacaagaccgtaagattatggacacccaacatcaaaggagactcgacg
gtttttaaagcgcacacagccaccgtacgcagtgtgaacttctccgccgacggtcagaaa
ctggtcaccgcttcggacgacaagtctgtgaaagtgtggagcgtgcatcggcagaaattc
atctactccctcaaccaacacaccaactgggtacgctgtgccaggttttctccagacgga
cgtttggtggcctcgtgcagtgacgaccggacggttcgtctctgggacacgtccactcgc
ctgtgcatcaacacattcaccgattacaccggaccagcaacatttgtggactttaacagc
agcggaacctgcatcgcgtcctcaggagcagataacacgctgaagatctgggacatgcga
actaacaaactcattcagcattaccaagtccacagtgccgccatcaacagcttctccttc
catccatcggggaattatctgatcagtggctccagcgacagcacagtgaagatcgtggac
ctgctggagggacgactgatctacactctccacggccacaagggtccagttctggctgtg
gtgttctctcgagaaggagacctgtttgcgacaggtggatgtgatggtcaggtcctcatg
tggaagaccaactttgatgctctgaactacagggagatgttgagcagtcacaggaagcgt
gtaactccagatcctcctcctcacctgacggacatctttcctcgctctccacacgtgcac
ctcgcccacgactcagccgtgcagattaacccagtggtccctaacatccaatcagctcat
cctcaggtggtggatattggagaagatccgttcagtctgggtgcgggtagacacaccagt
tggatcacagaccccagcgaacatcccagcaccagcacaggacgcaatcttgacatattt
actgacacacaccaccgggaagaagctttggaagaggacgatcttgaaccacggctcaca
gacttgcaggaggaacgctctgtgacttcgccggctttgagaagcacgttagaacacatt
gttcagcagctcgacatcctgactcagaccgtggctgtactggaagagcgtctcacgctg
acagaggacaagctgagagagtgtctagacaaccaggctgttattctggagcagatgcag
cagcagccagacaaagagacgagaggcgctgagggtccggcagtttga
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