Tachysurus vachellii: 132856198
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Entry
132856198 CDS
T09596
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132856198 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tvc01009
]
132856198 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132856198 (pcdh11)
Protein phosphatases and associated proteins [BR:
tvc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132856198 (pcdh11)
Cell adhesion molecules [BR:
tvc04515
]
Cadherins
Protocadherins
132856198 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
AP3D1
Motif
Other DBs
NCBI-GeneID:
132856198
NCBI-ProteinID:
XP_060741657
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All DBs
Position
13:complement(8989282..9188761)
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AA seq
1232 aa
AA seq
DB search
MDLLSESHVLVLFLTCLVSLCWAQEKDYTVKEEQPENVRIGNLRKDLDLNLDPNVKLSSA
LEFKPVYKSGEVPLVRVEASTGEIFTTSNRIDREKLCSGVFSEKRCFYEIEVAVLPDEIF
RLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGLNGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDRETKDTFVMKIKVEDGGTPPKSSTAILQVTVS
DVNDNRPVFKDTEVEVNVPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISLVSRRHF
AIDSSTGLITIKQPLDRESNPVHKLIVLASDGSTTPSRATVIVNVTDINDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLNGKVTCYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDSGKPPLNTSAMILIKIKDENDNTPVFPQPEVQLSIPENND
PGTQLIKISATDADSGSNALIIYTLGQDAPDGFNIDPRSGILSVSKRLDREKQETYSFTV
IAKDNGSNPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNSVVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFIVKAVDGGLIQTTSYAKVT
INVVDINDNRPVFVIPPSNYSYDLVPFTTSPGSVVTRVYAIDNDTGMNAELQYSIIGGSP
RGLFAIDKITGNITLQEKIVNADQGLHRLVVMVKDLGQPDPLHAIALVHLFVNDTISNAT
FIQEQVRKSMETPLDRNVGDNDVIPQNNGYVIVVIAIIAGTMTVILVIFVTALVRCRQTP
RHKVVQKGKQSGEWVSPNQEGRQIKKKKKKKKRSPKSLLLNFVTIEESKSEDPSHEHING
TLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVAPKKHHV
IQELPLDNTFVVGCDTLSKCSSSSSDPYSVSECNCQGSFTAPGQIHTRQNQNQTPDKTLT
AVSATCPHKQSQRRVTFHLPDGSQESCNATGPVEQEVGSTAGATSTTQSLPLGFPQDEYY
EQTSPNSRTEGDGNSDPESTIEVNLQKAMAEASETCTQECLILGHSDSCWMPPAMTQFQT
TAAATLPSFSLQQSWARSGAMPDGRHTLGRSVPRDDLDKGSNRPQFYSTLDRHCSKKEDA
VKVIPLASFSATSSPQNSGAGTKSSFLHEHQL
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgagtgaatcccatgtgctggtgcttttcctcacctgcctggtgtcgctg
tgctgggcccaggagaaggattacacagtgaaggaggaacagccggagaacgtgcgcatc
gggaacctgcgcaaagacttggacctaaatctggaccccaatgttaagctgtcctcagcc
ctggagttcaaacctgtctacaagtcaggagaggttcctttggtgagggtggaggccagc
actggcgagatcttcactacgtcgaatcgcatcgaccgcgagaagctgtgctccggggtg
ttcagcgagaagcgctgcttctacgagattgaggtggctgtgctgcccgatgagatcttt
cgcctggtcaagattcgcttccttattgaagacatcaatgacaacgcccctctgttccag
tctaccgtcattaacatctccattcccgagaacacagctatcaataaccgctatccggta
ccctcagccttcgacccagacgtggggcttaatggcatccagcactatgagcttgtcaag
agtgtaagcgagtttggccttgacatcattgaaactccagagggagacaagtggccccaa
ctcatagtccaacaaaatttggatcgagaaaccaaggacacgtttgtgatgaaaatcaaa
gtggaagatggtggcacacctccaaagtccagcacagccatcctccaggttactgtctcc
gatgtaaatgacaatcggccagtgttcaaggacactgaggtggaggtaaacgtgccagaa
aatgcccctatggggacatcagtcacgcaactccacgccactgatgctgatcttggctcc
aatgctcagatccacttttcctttagcaatcaaatctctttggtatccagacggcacttt
gctatcgacagttctactggattgattacgatcaagcagccattggacagagaatctaac
cctgtccacaagcttatagtcttggcaagtgatggtagcaccacaccttcaagggctact
gtcatagtaaatgtaacagacattaatgacaacgttccatccatcgacactcggtatata
ataaaccttgtaaatggcacagtacttttgtctgaaaatgcccctctaaacacaaaaata
gctctaattacagtgactgacaaggatgctgaccttaatggtaaagtgacatgttacacg
gatcatgacgtaccctttcggttgaagcctgtttttaatgaccaattcttgttggaaact
gcggctcctttagattacgagactactcgggagtacgcaattaagatagtagcttcagat
tcagggaaacctcctttaaacacgtctgcaatgatcctcattaaaatcaaggatgaaaat
gataataccccagttttcccccagccggaggttcagctgtccatcccagagaacaatgac
cctggcacacagctgataaagatcagtgccacggatgcagacagtggttctaatgccctt
attatttatacccttggacaagacgcacctgatgggtttaacatagatccacggtctggt
atactctccgtcagcaagagactggatagagaaaaacaggaaacctattcatttacagtc
attgccaaggataacgggtctaatcctctgcaaagcaatgtcactgtgaagctaattgtc
caagaccaaaacgacaacagtccagccttcacccatcccgagtacaatttctatgtgcct
gagaacttgcctttgtatggcacagttggcttgattacagttacagatgcagatgctggt
gataattcagtagttaccctctcaatcataaatggaaaggacaattttattattgaccct
aaaactggggtaattaaaccaaacatcacattcgacagggagcagcaaagttcctatacc
ttcatagtcaaagctgtggatggaggattaattcagacaacttcatacgccaaggtcacc
ataaatgttgttgatattaatgacaatcggcctgtgtttgttatcccaccttccaattac
tcttatgacctagtccctttcacaactagccctggctctgtggtgacccgagtgtatgcc
attgacaatgacactggcatgaatgcagagctgcagtacagcattattggaggttcacca
agaggactctttgctattgacaaaattacagggaacattactctgcaggagaagatcgta
aatgctgatcaaggccttcataggttggtcgtaatggtcaaagacttaggacagccagac
cccttgcatgcaattgcgcttgttcacttgtttgtgaacgataccatctccaacgcaaca
tttattcaggagcaagtccgcaaaagtatggagacacccttggacagaaatgttggggac
aatgatgtaatccctcaaaacaatggctatgtaatcgttgtcatagccataattgctggg
actatgactgtcatattggtgatatttgtaactgctttggtacgttgtcggcaaacaccc
aggcacaaagttgttcagaagggcaagcaaagtggtgagtgggtatcaccaaaccaggaa
gggcggcagatcaaaaagaagaagaagaaaaagaagaggtctcctaagagcttgctgctg
aattttgtcactatcgaagaatccaagtctgaagacccttctcatgagcacatcaatggc
accttagaccttccagttgagcttgaggaacagacaatgggaaagtataattgggccacc
acaccaaccacatttaaacctgacagccctgatttagccaagcattacaagtcagcatct
ccccagcctacctttcagatcaaaccagaaacaccagtggctcctaagaagcaccatgtc
attcaggaactccccttggacaacacattcgtagttggctgtgacactctctccaaatgc
tcctccagcagctccgacccctacagtgtctcagagtgcaactgtcaagggagctttacg
gcacccgggcaaattcacacccgacagaaccagaaccagaccccagacaagacattgact
gcagtttctgccacttgtccacataagcagagtcagcggcgtgtgacctttcaccttccg
gatggttctcaggagagctgtaatgccactgggccagtggaacaggaggtgggcagcact
gccggtgccaccagcaccactcagtcgctgccactgggattcccacaggacgagtattac
gagcagacatcgcctaatagccgcaccgagggtgacggcaactctgaccccgagtctact
attgaagtgaacctgcagaaggccatggctgaagcctcggagacctgcacccaggaatgt
ctgatcctcggccattctgacagctgctggatgcccccagcgatgacccagttccagacg
actgctgctgccacgttgccctcattcagccttcagcagagctgggcacgcagtggcgcc
atgccagacgggcgtcacaccctcggcagatctgtgcccagagatgatctggacaaaggg
agcaatcggccccagttctacagcacactggacagacactgtagcaagaaagaggacgct
gtgaaggttatccctctggccagcttctctgccacatcgagcccgcagaactcgggtgct
ggcaccaagtcctcattcttacacgagcatcagctgtaa
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