Tachysurus vachellii: 132856310
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Entry
132856310 CDS
T09596
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
tvc
Tachysurus vachellii
Pathway
tvc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132856310 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132856310 (atrx)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132856310 (atrx)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
132856310 (atrx)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
132856310 (atrx)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
132856310
NCBI-ProteinID:
XP_060741820
LinkDB
All DBs
Position
13:complement(17576402..17620637)
Genome browser
AA seq
2090 aa
AA seq
DB search
MSTENGSKLTALVTKLHEFLDHSSEEETAASQVNDTSSGKMASSDSNINDEIMEKVQPGC
SSEVPKATARSKRKPAVVTKHTAVNEPDSADECEQDSVAGNPNDATIEMEEIPEDVVIVK
PEPVNNEGKDEFKGPEFRTKGGSKVKEESQRRRPDEHFEEIRCSRVNCTACGQQVNHFQR
DSVYQHPILKVLLCKSCFKYYMSDDISKDDDGMDEQCRWCAEGGNLLCCDYCSNAFCKTC
ILRNLGRKELSGIMNDDDKWRCYVCLPEPLHDLATACEKVLRNLECMKKPKGEQDKPKRD
GMKHKQGKVKNTALNGKDVNSDGSGTLTFSYKKLKVPKELIKKTKKLIETTNGLNSTFVQ
FIQQEPVYLGDNIVRHRHLKAFRSVLADLKKVHVTLEEALDEEFRDLEVQNGEGNGVANN
VPVAISVPNSEPADQSKDLDDEVVQDDTTDQVPASLEDDADEENVVTADIEMTEEVVEPV
VENPEDGFIESEANAEIVKNEPDCKDDASAAGEASLDKDIVSIPPSVPEELFEMVESLSD
CVKQESEKDSVDTDSTSSKTSLSESKCTESGKRSSKVNKKLVVKLTPIPLKITIKKDESK
SKEKDGALSPDESRRSPRMKTTPLRKSSEGRSKSRSKGKRANNEDCNASQIPVSADLSDS
DSDEVPEVLRQVEGMEASSEEPDTEPNGKAVGNNAAKKSAEEPSEKSVKRKLLASSSDSD
DVKASTAKKHASKKKKCRESDSSNHDSELEKEIKSLSKLSTTKKSSKRGKKQANEGKKEE
KEGEEESEGEEEEEGGEGKKKNKKKKKVEETKKEGKKGPKRSFERKRRSQKSKENAARDS
SSSDEEEEQAADSGEDSSDQQKIKPILESAMPHTDAFLQSSGDEAQAKQEPSQIVDDDDD
PENRIAKKMLLAQIKANYSSGDDSSSEDEDCKKDKEESSSTKAKNDGSSEGEEEEEDSDS
GSEVDVKKAGRRHKLLRKKLTLSEGESDNDKPAKSNKEAKRRGRRKVSSDDSDSDFKRSG
SGSPSESAMSASVSEDDDDDDDDSKSNKRRTRSSKKAEKDSERSYQKEKKKKRRRIKVQD
DSSSNKSAEEEGEEDDDDDGDDKGTPKGRKKIRKILKDDKLRSETQNALKEEEERRKRIA
EKERLREKLRETIVVEESSQVTCPITTKLVLDEDEETKEPLVQVHRNMVTKLKPHQVDGV
QFIWDCCCESVKKTKTSSGSGCILAHCMGLGKTLQVVTFLHTVLLCEKLNFSTALVVCPL
NTVLNWLNEFEKWQEGLKDEESLEVTELATVKRPQERSYALQRWHEDGGVMIIGYEMYRN
LTQGRNIKSKKLKETFQKTLVNPGPDFVICDEGHVLKNEASAVSKAMNSIKTRRRVVLTG
TPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLVDVRIMKKRAHILY
EMLAGCVQRRDYTALTKFLPPKHEYVLAVRMTPVQCKLYRYYLEHFTGVGSALEGGRGRA
GTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASETEESSMSLSSEDEK
PKRKKKRGKGKGESSDKSDSDDVEVIKEWNTSSRGGNPEGRNRAEPVEEVRPSNSGPGSP
SPDWYKEFVSESDAEILEHSGKIMLLFEILRMAEDVEDKVLVFSQSLISLDLIEDFLELA
GRAKEEGKPSPYKGEGKWFRNIDYYRLDGSTNAMTRKKWAEEFNDTSNVRGRLFLISTRA
GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQLKTVYVYRFLAQGTMEDKIYDRQ
VTKQSLSYRVVDQQQIERHFTMNELTELYTFEPDLLDDPSEKKSKRSTPMLPKDPVLAEL
LQNFKDQIVGYHEHDSLLDHKEEEALSEEERKAAWAEYEAEKKGLSMRFNQPAYPNVGIG
GSNYFPFNVAALASMSNQQLEDLINQGRQKVVEATNALKALPREPLEDVIGQVWKENPSL
SEAQVQGMALARQAAIDMELKHREAVYRDILNKQQTLMMYVQKVITNRKVHEQQMALARQ
GMLMNQLAIQNGMAGGMSQMDLLGLYQQLGALQGLPTPQIGKNPGPSKGL
NT seq
6273 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggaaaacggcagcaagctgactgcactggtgacaaaacttcatgagttcttg
gatcattcttcagaggaagaaactgctgcatcccaagttaatgatacctccagtggtaaa
atggcctccagtgactcaaacatcaacgatgaaataatggaaaaggttcagcccggttgt
tccagtgaagtaccgaaggccacagcacgctcaaaaaggaagcctgcggttgtaacgaag
cacaccgctgtaaatgagcccgattctgcagacgaatgtgagcaagattccgtcgccggg
aatcccaatgatgccacgattgaaatggaagagataccagaagatgtagttatcgtgaag
ccagaacccgtcaacaatgaaggaaaagatgaattcaaaggccccgagttccggaccaaa
ggagggagcaaagtcaaagaagagagtcagaggaggcgtcctgatgagcactttgaagag
atcaggtgttcgagagttaattgcactgcttgcgggcaacaagtcaatcatttccagagg
gactctgtgtatcagcatcctatactcaaagttcttctctgcaaatcctgtttcaagtat
tacatgagtgacgacataagcaaggatgatgacggaatggacgaacagtgcaggtggtgc
gctgaaggaggtaatctcctttgttgtgactactgcagcaatgcattttgcaaaacatgt
attctccgtaaccttggaaggaaggagctctctggaatcatgaacgacgacgataagtgg
cgttgctacgtgtgcctgcccgagcccctccacgacctcgccacagcttgtgagaaagtt
ctgagaaatctggaatgtatgaaaaagccaaagggagagcaggacaaaccaaaacgggac
ggcatgaagcacaaacagggaaaggttaaaaatacagcgttaaacggaaaggacgtgaat
tctgacggatcagggacgctaaccttttcctacaaaaagctaaaggttccaaaagaactg
atcaaaaagacaaagaagctgattgagaccacaaacggcttgaacagcacttttgtgcag
tttatccagcaggagccggtttacctgggcgataacatcgtccggcacaggcatttgaaa
gccttcagatctgttttggctgacttgaaaaaggtccacgtgactttggaggaggcgcta
gatgaagagttcagagaccttgaggtccagaacggagaggggaacggggtggcaaataat
gtacctgtagccatctccgtcccaaactctgaacctgctgaccagagtaaagatctggat
gatgaggtggttcaagatgacaccacagatcaggttccagcatctttagaggacgatgcg
gatgaggagaacgtagttacggccgatatagaaatgactgaagaagttgttgaacctgta
gtagaaaatccagaggatgggtttattgaaagcgaagctaatgcagagattgttaagaat
gaacctgactgtaaagatgatgcttcagcagctggtgaagcctctctcgacaaagacatc
gtgtctattccaccatctgttcctgaggagctcttcgagatggtcgagagtctttcagat
tgtgtaaaacaagagagtgaaaaggattcggttgatacagacagcacgtcaagtaagacc
tcgctgtctgaaagtaagtgtacagaatccggtaaaaggtcttcaaaggtgaataaaaaa
ctcgtcgtaaagctcaccccaattcctctgaaaattaccattaagaaagacgaaagcaag
tcaaaagagaaggatggtgctctgtcaccagacgaaagcagacgttcccccaggatgaag
accactcctcttcgcaaatcatctgaagggaggagtaagagtcggtccaagggtaagaga
gcgaacaacgaagactgcaacgcttcacagattccagtcagcgccgatctgtcggactcg
gactctgacgaagtccccgaggtgctgcggcaggtagaaggcatggaggcaagttcagaa
gaaccggacacggagcctaacggcaaggccgtgggcaacaatgcagctaaaaagtcggcc
gaagaaccgtccgaaaagagtgtgaagcgcaagctccttgcatcttcctcagattcagat
gatgtgaaggcatcgacagcaaagaaacacgcttccaaaaaaaagaagtgtagagaatcc
gattcatctaatcacgactcagaacttgagaaggagatcaagagtttaagtaagctcagc
accacaaagaaatcatctaaacgaggcaagaagcaggcgaatgagggcaagaaggaggag
aaggagggtgaggaggagagtgagggcgaggaggaggaggagggcggcgagggcaagaag
aagaataagaagaagaaaaaggtggaggagaccaaaaaggaggggaaaaaaggtccaaag
agatctttcgagaggaaacggaggtcacagaaaagcaaagaaaacgctgcaagagattca
tcctccagtgatgaagaggaagagcaggcagcagactctggagaggatagcagtgaccag
cagaagataaagcctattcttgagtctgccatgccccatacggatgctttccttcagtca
tcaggagatgaagctcaagcgaagcaggaaccctcccagattgtcgatgatgacgacgac
cctgagaatagaattgcaaagaagatgctattagctcagatcaaagccaattactcgtca
ggggatgacagctcttcagaagacgaagactgcaaaaaggacaaagaggaaagctcttca
acaaaagcgaagaatgatggtagctccgagggtgaagaagaggaagaggactcggactct
gggtcggaagtggacgtgaaaaaggccgggcgaagacacaagctgcttcgtaagaagctg
accctaagcgagggcgagtctgataatgacaaacctgccaagagcaataaagaggccaag
agaagaggaagacgaaaagtgagcagtgatgactctgattcagactttaaacgctcaggc
tctggttctccgagcgagtcagcgatgagtgcctcagtgagtgaggatgacgacgacgat
gatgacgacagcaaaagtaacaagcggcgaacgcggtcctcaaaaaaagctgaaaaagat
agtgagaggagttaccagaaggagaaaaagaaaaagcgacggcggattaaggttcaggac
gattcttccagcaacaagagtgcagaggaagagggtgaggaagatgatgatgatgatggg
gatgataaaggtacaccaaagggccgcaagaagattcgcaagatcctaaaagacgacaag
ctgcgctccgagacccagaatgctctaaaagaggaagaagagaggcgtaaacgaattgct
gaaaaagagcgcctgagagaaaaactacgagagacaatagtggtggaggaatcctcgcag
gtcacctgtcccattactactaaactggtcttggatgaggacgaagagaccaaggagcca
ctcgtccaagttcacagaaacatggtgacaaagctgaagccccatcaggtggacggtgtg
cagttcatttgggattgctgttgtgagtctgttaaaaagactaagacttcatctggctca
ggctgtatcctcgcacactgcatgggtctgggcaaaacccttcaggtggtgacgtttctc
cacactgtgcttctgtgcgagaaactcaacttctcaacagctttggtggtgtgtcccctt
aacaccgtactcaactggctaaacgagtttgagaagtggcaggagggcttgaaagacgag
gaaagcttagaggtgaccgagctggccacggtgaagaggccccaagagcgatcgtacgcc
ctgcagcgttggcatgaagacggtggcgtcatgatcatcggttatgaaatgtaccgcaac
ttaacgcaaggccgcaacatcaagagcaaaaagcttaaagagacgttccaaaagaccctc
gttaacccaggtccagactttgttatttgcgacgagggccacgtgttgaagaacgaagcc
tcggccgtgtcaaaagccatgaactccattaaaactcggcgaagagttgttctgaccgga
actccgcttcagaacaacctgattgagtaccactgcatggtaaattttatcaaagaaaac
ttactgggctcagtgaaagagttcaggaaccgttttatcaaccccattcaaaacggccag
tgcgccgactccacgctggtcgacgtgcggatcatgaagaagcgagcgcacattctttat
gagatgctggcaggctgtgttcaaagaagagactacactgcacttactaagttcctgcca
cctaaacatgagtatgtgctggcggtgcggatgactcctgtgcagtgcaagctgtacaga
tactatctggagcactttacaggtgtcggttctgccctggaggggggaagaggccgtgca
ggcacaaagcttttccaggatttccagatgctcagcagaatctggacgcatccttggtgt
ctccagctggactatatcagtaaggaaaacaagggttactttgatgaggacagcatggat
gaattcattgcatccgaaacggaggagtcatcgatgagcctgtcctctgaagacgagaaa
ccaaaaaggaagaagaaacgggggaaaggcaaaggcgagagctccgacaagtccgacagc
gacgacgtggaggtgattaaggagtggaacacgagctcccgtggaggaaacccagagggg
cggaatagagccgagcctgtagaagaagttcgtcccagcaactcaggccctggtagccct
tctccagactggtacaaggagtttgtgagcgaatcggacgctgagattctggaacactcc
ggaaagatcatgcttttgtttgaaatcctgcgcatggcagaagatgtggaagataaagtg
ttggtgttcagtcagtcactcatttcattggacctcattgaggatttcctggagttagca
ggccgtgccaaagaggagggaaaaccctctccttacaaaggtgagggcaagtggttcaga
aacatcgactactaccgtctggacggttctactaacgccatgactaggaagaaatgggcc
gaagaattcaatgacaccagcaacgttcggggtcgtctttttctcatctctacaagagct
ggctctctaggaatcaacctagtggcagcaaatcgcgtcattatctttgatgcctcatgg
aacccgtcttatgacattcagagtattttcagggtgtaccgcttcggccagctgaaaacc
gtatacgtctacaggtttttggctcagggaaccatggaggacaagatttacgacaggcag
gtgaccaaacagtccctgtcgtaccgtgtggtggaccagcaacagattgagcgccacttc
actatgaatgaactgactgaactctacacatttgagccagacctgctggatgacccatcg
gaaaagaaaagcaagaggtccacacccatgttacccaaggaccctgttctggccgagctg
cttcagaacttcaaagatcagattgtgggttaccacgagcatgactccctacttgatcac
aaagaggaggaggctttgagtgaggaggaacgtaaagccgcctgggctgagtacgaggca
gagaagaagggtctctctatgcgcttcaaccagccggcatatcctaatgtaggcatcgga
ggatcaaactacttccccttcaatgtggcagctctggcctccatgtccaaccagcagctg
gaggacctgatcaaccagggacgacagaaggtggtggaagccaccaatgccctgaaagct
ttgccccgggagccacttgaagatgtcattggccaggtgtggaaggagaatcccagtctg
tcagaggcccaggtgcagggcatggctctggccagacaggcagccatcgacatggagctg
aaacacagagaggccgtgtaccgagacattctcaataagcaacagacgctgatgatgtac
gtgcaaaaggtgatcaccaatcgcaaggttcatgaacagcagatggcgcttgccaggcag
gggatgctgatgaaccagctggccattcagaatggcatggccggcggaatgagtcagatg
gacctgctgggcctgtaccaacagctgggtgccctccagggtctgccaaccccccagatc
ggcaaaaacccagggccctcaaagggcctatag
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integrated database retrieval system
