Tachysurus vachellii: 132856538
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Entry
132856538 CDS
T09596
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tvc
Tachysurus vachellii
Pathway
tvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132856538 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132856538 (cnot2)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132856538 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132856538 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
132856538
NCBI-ProteinID:
XP_060742087
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All DBs
Position
14:16312274..16323475
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AA seq
521 aa
AA seq
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MFSATRKKFVEGVESDYPDESMYYGQPSMFPHRSEKDMLASPSPSSSGQLSQLGASLYGP
QSALGFSIRSMSNNNPQLNRSLTQGTQLPSHSTPTTGVPTMSLHTPPSPNRGILPMNTRN
MMNHSQVGQGMSLGGRTSSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGMGR
SQGFGMNSLSNNIFNGTDGSENVTGLDLSDFPALADRSRREGNGNPTPLHNPLAGRAPYV
GMVTKPSTEQSQDFSIHNEDFPALPGPNYKDPTLSTDESKSQNLNSSTKSSSSADGPKFP
GDKTSAQNNNQQKKGIQVLPDGKVTNIPTGMVTDQFGMIGLLAFIRAAETDPGMVHLALG
SDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLARY
GEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTY
YFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgctacaagaaagaagtttgtagagggggtcgaaagcgactaccctgatgag
agtatgtactatggccagccgtcgatgttccctcatcgatcggagaaagatatgctggca
tctccttcgccgtcatcgtcaggtcaattgtcgcagcttggtgcaagtttgtatggtccc
caaagtgcactaggcttctcaataaggagcatgagcaacaacaaccctcagttaaaccgg
agtttaacacaaggtactcagttaccgagccatagcaccccaacaacaggagtcccaacc
atgtctctccatactccgccttcgccaaacaggggcattctgcctatgaacaccaggaac
atgatgaatcactcacaagtgggtcagggtatgagtctgggtggcaggacaagcagtatg
ggaagctcaggcctcgggagcccaaaccgcagctcacccagcatcatctgtatgccaaag
cagcaaccggcacgacagcccttcaccatcaacagtatgtcaggttttggaatgggtcga
agtcaggggtttggtatgaactcgttatcgaacaacatctttaatggaacagatgggagt
gaaaatgtgacgggactggacctctcggactttccagcattagcagacagaagtcggagg
gaaggaaatggaaacccaacaccattgcataatccgttggctggaagggctccctatgtt
gggatggtcacaaagccgtcaactgaacagtcccaagatttctcgattcacaatgaggat
tttcctgcactgcctgggcctaactacaaggatccaacgctgagcacggatgaaagcaaa
tcacagaacttgaactcatcaaccaagagcagctccagtgcagatggtcccaagttccca
ggggataagacatcagcacagaacaacaaccagcagaaaaaggggattcaggtgttgcct
gatggcaaggtgacaaacattcctactggaatggtgacggatcagtttggaatgattggg
ctgctagcctttattcgagcagctgaaacagaccccggaatggttcatctggcgttagga
agtgacttgaccacactgggactcaacctcaactctccagagaacctgtatcccaagttt
gcatctccttgggcatctgcaccatgccgaccacaggacattgatttccacgttccatcg
gagtacttaaccaacattcacataagggacaagcttgctgcaataaaactagcacgatat
ggggaggacctgctgttctacctctactacatgaatggaggagatctcttacagcttcta
gctgctgtggaactctttaaccgagactggaggtaccataaagaggagagggtatggatt
acaagagcacctggcatggagcccactctgaagaccaacacttatgagagggggacatac
tacttctttgattgtcttaactggaggaaggttgctaaggagtttcaccttgaatatgac
aagcttgaggagcggcctcatgtaccaaccaccttcaactacaacccggcgcagcaggcc
ttctga
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