Tachysurus vachellii: 132856674
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Entry
132856674 CDS
T09596
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
tvc
Tachysurus vachellii
Pathway
tvc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
132856674 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132856674 (myo5c)
04131 Membrane trafficking [BR:
tvc04131
]
132856674 (myo5c)
03029 Mitochondrial biogenesis [BR:
tvc03029
]
132856674 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tvc04812
]
132856674 (myo5c)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
132856674 (myo5c)
mRNA cycle factors
P-body specific factors
132856674 (myo5c)
Membrane trafficking [BR:
tvc04131
]
Others
Actin-binding proteins
Myosins
132856674 (myo5c)
Mitochondrial biogenesis [BR:
tvc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
132856674 (myo5c)
Cytoskeleton proteins [BR:
tvc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
132856674 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
ERM_helical
Csm1_N
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
132856674
NCBI-ProteinID:
XP_060742307
LinkDB
All DBs
Position
14:complement(20756822..20777384)
Genome browser
AA seq
1748 aa
AA seq
DB search
MALSELYTQYNRVWVPDTEQVWKSAELLRDYTPGDPVLHLQLEDGTEIQYPVEVDGQLPP
LRNPDILVGENDLTALSYLHEPAVLHNLRVRFVDSKIIYTYCGIILVAVNPYKQLHIYGD
AVIRAYSGQNMGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFA
MVSKSSSNTQVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQMCACADHKDFKSLRLLSADKFNYICMGGQTEIEGVDD
RADMAETCRTFNLLGLKSDFQSDVFKMMAGILHLGNVVIRAVGSDQSSINSTDPHLVVFC
DLLQVRVEDMCRWLCSRRIVLASETVIKPQPRERAINARDALAKHLYAYLFDCVIHRINQ
ALRVPGKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDNNWLQKLYNYLSSKPMFEKPR
LSNEAFVIHHFADRVEYQSKGFLEKNRDTLYEELVDIMRASKFLLLAGFFTEEDQKSVQT
VKGVKVKAARPGVKPTNKQLRTTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKLPFE
YDSVRVVQQLRACGVLETVRISAKSYPSRWTYIEFYSRYSILMSQAELRLGEKKQTCKTV
LQRLIPDSNQYKFGRTKIFFRAGQVAYLEKLRLDYLRTACVTIQKHVRGWAQRRRYLRMR
QAAIIIQQYIHGKRQIRHMVTAAALKQGWAAVVIQRHCRGYLVRRLYQLLLVAAVTIQAY
TRGWIARKRYRKMLEEHKALILQKYARAWLVRRRFQTMRRLVLNVQLSYRVQQLRKKLEE
QSKENRGLMERLTRLANAHAQGLDKVQSLEVELSKAANERLSVEEREKKKEEKSSQVIAQ
LRDERDKVSLENQALQTKLKDSIQQMTGNFEGLKKKLIEDLEREERLRKVAEHNSELQKE
DLDKEIAALKEENRRLREEKIQLEAKAEEDTQIKKELEEQLGQFAKHVKVIPELHKEINS
LQNEKTEAERMIREKTAQTRAKINMITRQLIGDTNEEELILRLSKDATEPADDEGDLLFA
FNELQNTTRLVENHLREQREGYKSELETLVFKNDHLMRENQQLQALFQEKSDVNHSIGQE
VARLTAENMVIPELKQQVTELRRHRQELETQLEQQRTEMTESNVRVSNELQRKLEEESSQ
KRLLEERNRDNEREREEMEKRLEELEEKIEQLKRQQQTDNEAKTKLRLETSRLTAENMDF
EEQSDMKDRTIKRLQDQIKALQAPVKVSEKDGPAVPKEYLGMLEYKKEHEGRIVQTLIHE
LKPRGVVVNMIPGLAAHLLFMCIRHADYLNDGAKLKSLMHAIISGIKQVTTNHQENFEIL
SFWLSNTYYLLNCLKQYSGEEEFMKHNTPRQNKNCLQNFDLSDHRQIFSDLAIQIYHQFI
SVMEDALFPMIVSGMLEHESLQGISSMKPTGFRKRSNSILGDGLREGEGHSYSISSILEL
LSDFHSCIAQQGMDQQLQSQALRQLFYLIGATSLNSILLRKDLCSCRKGMQIRCNISYLE
EWLRDKGLQGYNIMDTLAPLSQSAWLLQVNKTTDDDAAEIQQRCHELSPVQIVKILNSYT
PIDDFEKRVAPSFVRKVQALLQDREGSNQLMMDTQYRFQVTFPFCPSTQALELLQVPNSL
HLSFVTRV
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtcggagctgtacactcagtataacagagtctgggttccggacacagagcag
gtgtggaagtcagctgagctcctcagagattacacacctggagatccagttctacacctg
cagctagaggatggaactgagatccagtaccctgtagaggtggacggtcagttacctcca
ctccgtaacccagacatcctagtgggagagaatgacctaactgctctgagctaccttcat
gaaccagctgtgctgcacaacctgagggtcagatttgtggactctaaaatcatctacaca
tactgtggcattatccttgtagccgtaaacccatataaacagctgcacatttatggagat
gcagtcatccgtgcttactctggccagaacatgggggatctggaccctcatatatttgcg
gtggcggaagaagcttataaacagatggcaaggaacaacaagaatcagtccatcatagtc
agtggggagtctggagctgggaagactgtgtctgctcgctatgctatgagatacttcgca
atggtcagcaaatctagcagtaacacacaggtggaggacaaagttttggcatcgaacccc
atcactgaagcaatcggtaacgcaaagaccaccaggaatgacaacagcagtcgctttggg
aaatacactgaaatcagcttcgaccggagataccagatcatcggtgctaacatgaggaca
tacctcctagaaaagtctagggttgtttttcagtcggagaacgaaagaaactatcacatc
ttctatcagatgtgtgcttgtgcagaccacaaagactttaagagcctgagactgttgagt
gcagacaagtttaattacatctgcatgggagggcagacggagatcgagggagttgacgat
cgtgctgacatggctgaaacctgccgcactttcaatctgctgggactaaagagtgacttt
cagagtgatgtattcaagatgatggcaggaattttgcacttgggaaacgtggtgatccga
gcagtcggctcagaccagtcatccatcaattcaactgaccctcacctggttgtgttctgt
gatctgcttcaagtcagagtagaagatatgtgtcgctggttatgttctcggcgtattgtc
ctggcatctgagactgtgatcaaaccacagccaagggagcgtgccataaatgctcgcgat
gcactggccaagcatctttatgcttatctctttgactgtgtcatccacaggatcaaccaa
gccctgcgtgtgcctggaaaacagcactcttttattggtgtgctggatatctatgggttt
gaaacctttgatgtgaatagctttgagcagttttgcatcaactatgctaatgagaaactc
caacaacagtttaatttgcacgtgtttaaactagagcaagaggagtacatgaaggaggac
atcccctggacgctgattgatttctatgacaaccaaccggtcattgatcttatcgaggcc
aaaatgggcatcctggacttgctggatgaggagtgtctgtttcctcagggtactgataac
aactggctgcaaaagctctataattatctgagctcaaagcctatgtttgagaaacctcgt
ctgtccaatgaggcgtttgtgatccatcactttgcagaccgggtagaatatcagagtaaa
ggtttcttggagaagaatagagatacactctacgaagagctggtggacataatgagagcc
agcaagtttcttctcttggcaggtttctttaccgaagaagaccaaaaatctgtgcagaca
gtgaagggtgtcaaagtgaaagcagcacgacctggagtcaaaccaaccaataagcaactc
agaaccactgtaggagataagtttcgaagttcattgtatctgttaatggaaactcttaat
gccaccacaccgcattatgtccgctgcattaagcctaatgaagaaaagctgccctttgaa
tacgactctgtgcgtgtggtgcagcagctgcgggcttgtggagtactagagactgttcgg
attagtgctaagagctacccatctaggtggacctacattgagttctacagccgttacagt
attctgatgagccaggctgagctcagactgggggagaaaaagcagacatgtaaaacagtg
ctgcagaggctcatccctgactctaatcagtacaagttcggacggaccaaaatcttcttc
cgggcaggacaggtggcatatctggagaagctgcgtttagattatctgcgcactgcatgt
gttaccatccagaagcatgtgaggggctgggctcagagacgcagatatctacgcatgaga
caagctgccatcatcatccagcagtacatccatggcaagaggcagatcagacacatggtt
acagcagcagctctgaagcagggctgggcagctgtggtcatccagaggcattgtcgtggc
tatcttgtacgccggctttaccagcttttactggtggctgcagtcactattcaggcatat
accaggggatggattgcccgcaagcgctacagaaagatgttagaggagcataaggctctg
attctacagaagtatgctcgggcctggctggtgcgtcgccgcttccagaccatgcgccgt
ctcgtcctgaacgtgcagctctcttacagagtccagcagctgcggaagaaattggaggaa
cagagtaaagagaatcgtggtctgatggagagactgaccagactggccaacgctcatgct
cagggattggacaaggtgcagtccctggaggtggagcttagcaaagcagccaatgagagg
ctatctgttgaagagagagagaagaagaaggaagagaaaagcagtcaggtgattgctcag
cttcgggatgaaagggataaagtcagtctggagaatcaggctctccaaaccaaactcaaa
gattccatacaacaaatgacaggcaattttgaaggtttgaagaaaaagctcatagaggac
ttagagagagaagagaggctgagaaaggtcgcagaacacaacagtgagctgcagaaggag
gacttggataaagagattgcagcattaaaggaggagaatcgcaggctgagagaagaaaag
atccagctggaggcaaaggctgaggaggacacacagatcaaaaaagagctcgaggagcag
ctcggtcagttcgccaaacatgtcaaggtgataccagagttgcataaagagattaacagc
ctccaaaatgaaaaaactgaagcagagagaatgatcagggagaaaacggcgcagaccaga
gcaaaaattaatatgattaccagacagctcattggtgacacaaacgaagaggagctcatt
ctcaggttgagtaaagatgccacagaacctgctgatgatgaaggagatctactgtttgca
tttaatgagctgcagaacaccaccaggctcgtggagaatcatttacgtgagcaaagggaa
ggttacaaaagtgaactggagacactggtttttaaaaacgatcacctgatgagagagaac
cagcagctacaagccctctttcaggagaagagcgatgtgaaccacagcattggacaggag
gtggccaggctcactgctgaaaacatggttatccccgaactgaagcaacaggtaacagag
ttacggcgtcacagacaggagctggaaactcagctagaacaacaacgcactgagatgact
gaaagtaatgtaagagtatctaatgagcttcagcgtaagcttgaagaggaaagctcccaa
aaaaggcttttggaagaaaggaacagagataatgagagggaaagggaggagatggagaag
aggctggaggagctagaggagaagatagagcagctgaagagacaacagcaaacagacaac
gaagccaagaccaaactcagactagagacttcacgccttacggctgagaacatggacttt
gaagagcaatcagatatgaaagacagaaccataaagcggctgcaggaccaaatcaaagct
cttcaggcaccagtgaaagtcagtgagaaagatggaccagctgttccaaaagaatacctt
ggcatgctggagtataagaaagagcatgaaggtcggattgtgcaaacattaatacatgag
ctgaagccgaggggtgtggtggtgaatatgatccctggtttggcagcccatctgcttttt
atgtgcattcggcatgctgactatctgaatgatggagcaaagctcaagtccctcatgcat
gccatcatctctggaatcaaacaagtcaccacgaaccatcaagaaaactttgagatcttg
tccttctggctctccaacacatactacctgctcaactgcctcaaacagtacagtggagaa
gaagagtttatgaagcacaatacacctcgtcagaataagaactgccttcaaaactttgac
ctgtcagatcacagacagatcttcagtgatcttgccattcagatctatcaccagtttatc
agtgtgatggaagatgcccttttccctatgattgtctctgggatgctggagcacgagagc
cttcagggcatctcaagcatgaagcccacaggtttccgtaagcgctccaacagcatactg
ggagatgggctccgagaaggcgagggccacagctacagcatctcctccatcctagaactg
ctgagcgacttccacagctgcatagcacagcagggcatggatcagcagctgcagagtcag
gcccttcgccagctcttctacctgatcggcgctacctcactcaacagcatcctcctccgc
aaagacctctgctcctgccgcaagggcatgcagatcagatgtaatatcagttacttagaa
gagtggctaagggataaaggccttcagggctacaacattatggacactctggcaccgctg
tcacagtccgcctggctcctgcaggtgaacaaaaccacagacgatgatgcagcagagatt
cagcagagatgccacgagctctcaccagttcagattgtgaagatcctcaactcatacact
cccattgatgactttgaaaagagagttgcgccgtcttttgtgcggaaagttcaggcactg
ctacaggatcgtgagggctcgaatcagttgatgatggacacacagtatcgcttccaagtt
actttcccattctgcccatccacacaagctctggagctcctgcaggtgcccaacagcctt
cacctgagctttgtcacccgcgtatga
DBGET
integrated database retrieval system
