Tachysurus vachellii: 132856758
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Entry
132856758 CDS
T09596
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
tvc
Tachysurus vachellii
Pathway
tvc04350
TGF-beta signaling pathway
tvc04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
132856758 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132856758 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132856758 (neo1a)
Cell adhesion molecules [BR:
tvc04515
]
Immunoglobulin superfamily
DCC/UNC5 family
132856758 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
NDNF
C2-set_2
fn3_2
DUF6266
EphA2_TM
DUF4912
DUF4834
Motif
Other DBs
NCBI-GeneID:
132856758
NCBI-ProteinID:
XP_060742472
LinkDB
All DBs
Position
1:complement(37878019..38030726)
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AA seq
1446 aa
AA seq
DB search
MAERGARVLLSLLCLTSACSLAPAARAQKGSVKRHFNPFWFSVEPSDTLAVRGSPALLNC
SVSSELPAKVHWKKDGVLLNPDDRRQVLLEGSLLISSVMHSKHNKPDEGVYQCVATIENL
GTISSRTARLDVAGTPRFSGQPETTSVHFGENQVLSCEVNADLVSFIRWERDKQPVLLDQ
RVYMLPSGALVISNATEVDAGLYRCVLENAGPTKTSDEAELQILPETSEVRRLEFLLQPG
SMSRVVGDSVLFPCVVSGFPAASVRWMRDDRVIDDSDSRFELLGGGSLQIFNLTEEDGGM
YSCLADNTNDSVEARAELTIQVPPKFLKTPTNTYAHEATDIVFECEATGSPAPTIKWVKN
GDAVVPSDYFRILKEQNLQVQGLVKTDEGFYQCLAENEVGNIQASAQLVILDPATPSSSP
TLIRATADRVTPGSGGSSGSNPGPGAAPGPVPSPPRDVVASLVSTRFIKLTWRLPLEPQG
DDITYSVYFGLEGAKRERTVNTSRPGETQVTIQNLKPDTKYSFRVVAYNKHGRGESSAPL
KVATQPEVQVPGPAPNFQAVVQTSTSASLTWDKPLTGNGDIQNYKVYYMEKNLGNEKDVE
VSGLSYTMNGLKKFTEYNFRVVAYNKHGPGVSTDDVSVRTYSDVPSAAPQNMTAEVLNSK
SIMVRWQPPPSDAQNGEIIDYKIRYKKGTRKSEPLEITAGNQLSKLIDGLQRGTEYSVRV
SAITVNGSGPATDWTTVETFESDLDESRVPDVPGSLHVRPLVSSIVVSWSPPENQDIMVR
GYIIGYGIGNPHSQTIKVDYKQRYYNIENLDPSSQYVITLKAYNNMGEGIPVYESALTRP
QTDPVDPDVDLYELFHPPYTPVPDPIPMMPPVGVQASVLSHDTIKVTWADNSLPKNQKIT
DARFYTVRWKTNIPANTKFKTANTTNLSHMVTGLKPNTLYEFSVMVTKGRKTSTWSMTAH
GTTLEATPSSAPKDVTVVSKEGRPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDWV
IEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSDAVQFRTLKASGIPGKPGRPAT
LEPGIGKSGMPGSENHILVIVIIVSVGGFIIIALVVGALLCSRRSTSQQKKKRAACKSSN
GSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPNPVMTDTPIPRSSQDITPVDGTMDP
ILQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHHHHYHL
GSLASPTHNYLQHTGSPRPLASSISYLDRAESPESVRNTPTTDLLPASAQPSCSIDHSET
DISYHSSAAEDEPSYNPPTAHVRPTHPLKSFAVPSVPAHASAYEGVSLPSTPLLSQTGAH
SVKTASIGTLGRTRTPMPVIVPNAPDVPDSSRMLEECESKYEKDELSEEMAHLEGLMKDL
NAITTA
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcgcgcgtgctcctctctctcctctgcctcacctctgcgtgctcg
ctcgcgcctgctgcacgcgctcagaaaggctccgtcaagaggcactttaaccctttctgg
ttctcggtggaaccctcggatacgttagctgtgcggggatcccctgcgttactcaactgc
tctgtgtccagcgagctacctgcgaaggtgcactggaagaaagacggcgtcctgctcaac
ccggacgaccgcaggcaggtcctgcttgagggctcgctgctcatcagctccgtcatgcac
tccaaacacaacaaacccgacgagggcgtctaccagtgcgtagctaccatcgagaacctc
ggcaccatcagcagccgcaccgccaggctcgatgtcgcaggtacacctcgattctctgga
cagcccgagacgacgtcggtgcatttcggggagaaccaggtgctcagctgcgaggtcaat
gccgacctggtgagctttattcgctgggagcgtgataagcagccggtgcttttggaccag
agagtgtatatgttacccagcggtgctctggtcatcagcaacgccacggaggtggacgca
gggctttaccgctgtgtgctggaaaatgcaggaccaaccaagaccagtgatgaggctgag
ctccagatcctgcctgaaacgtcggaggtgcgcaggctggagttcctcctgcagccaggc
tcaatgtccagggtggtgggagacagcgtgctgttcccctgcgtggtgagcggatttcct
gcagcctcggttcgctggatgcgagatgatcgagtcatcgatgatagtgacagtcgcttt
gagctgctcggcgggggaagtctacagatctttaacttgaccgaagaggatggtgggatg
tacagctgcctggcggataacacaaacgactcagtcgaagctcgggctgagctcacgata
caagttcctccgaagtttctgaagacaccaactaacacttacgcacacgaggctacagac
atcgtgttcgaatgcgaggccaccggatcccccgccccaaccatcaaatgggtaaaaaac
ggagacgccgtggttccgagcgactatttccgaatcctgaaagagcagaatctacaggtt
cagggcctggtgaagacagacgaggggttttatcagtgtctagccgaaaacgaagtgggc
aacatacaagccagcgctcagctcgtcattctagatccagccaccccctcttcctcaccc
acactgatccgtgccactgctgaccgtgtaacaccaggctcaggaggcagctccggctcc
aaccccggccctggcgccgctcccggtcctgtgccttcgccaccccgtgatgtagtggcc
tcgctcgtctccacccgcttcatcaagctgacctggcgcctgccgctcgagccacagggc
gatgacatcacttactccgtctacttcggactggagggcgccaaaagagagaggacggtg
aacaccagccgtccaggagaaacgcaggtcaccatccagaacctcaagccagacaccaag
tactcctttcgagtggtggcgtacaataagcacggccgtggagagagctcagcacctctg
aaggtcgccactcagccagaagttcaagtaccaggacctgctcctaacttccaagccgtg
gtccagacgtccacttcagccagcctgacctgggacaaaccgctcaccggcaacggcgac
atccagaattataaagtttattacatggagaaaaacctgggcaatgagaaggatgttgag
gttagtggactctcctacaccatgaatggactgaagaagttcacagagtacaacttcagg
gtcgtggcctacaacaagcacggaccaggcgtctccacagacgacgtgtcagtgcggacg
tattcagatgtccccagtgcggccccccagaacatgacggcggaggtgctgaactccaag
agcatcatggtgcgatggcagccccctccatccgacgctcaaaacggagagatcatcgac
tacaagattcgttacaagaaaggcacgaggaagagcgaacctttggagatcaccgcagga
aaccagctcagcaaactcatagacggtttgcagcgcggcacagagtactctgtccgtgtg
tcagccataaccgtcaacggctcgggccctgcgactgactggaccaccgttgagaccttc
gagagcgatttggacgagtcccgcgtcccagacgtgcctggatctttacacgtccgtcca
ctggtcagcagcatcgtggtgagttggtctcctccagaaaaccaggacatcatggttaga
ggttacatcataggctatggaatcgggaaccctcacagccaaacgattaaagttgactac
aaacaaagatattacaacatcgagaaccttgatcccagctcacagtacgtgatcacgctg
aaggcctacaacaacatgggtgaaggcatcccggtgtacgagagtgcccttacacgaccc
cagacagaccctgtagaccctgatgttgatttgtacgaacttttccatcctccatacact
ccagtaccagaccccattcccatgatgcctcctgtgggcgttcaggcttcggttctgagt
cacgacaccatcaaagtcacatgggccgacaactcgctgcccaagaaccagaaaatcaca
gatgcacgtttctacacagtgcgctggaagaccaacataccagcaaacaccaagttcaag
acggccaacacgacaaacctgagtcacatggtgactggtctgaagcccaacactctgtac
gagttctccgtcatggtcactaaaggcaggaaaaccagcacatggagtatgacggctcac
gggacgacattagaagccacgcccagttcagccccgaaagacgtgactgtggtcagtaag
gaaggtcgtccacgcaccatcatagtcaactggcagcctccttccgaagcaaacggcaaa
attacaggctacattatctactacagcaccgatgtcaatgccgaggtacacgactgggtg
attgagccggtggtggggaaccgactcactcaccagatccaggagctgacccttgacaca
acatactactttaaaatccaggctcgcaactccaaaggcatggggcccatgtctgacgca
gtccaattccgcactcttaaagcttctgggattcccggtaaaccaggccgaccagctaca
ctagaacctggtattgggaaatcagggatgcctggtagtgaaaaccacatcttggtgatc
gtcatcattgtgtctgtgggaggcttcatcatcatcgcgttggtggtgggagccttactg
tgctcacgccgctccacttcccagcagaaaaagaaacgggcagcctgcaagtccagcaac
ggctcacacaagtacaaaggcaactctaaagacctcaaaccacctgatctttggatccac
cacgagcgcttggagctcaaacccatcgataagtcacccgaacccaatccagtcatgaca
gacaccccgattccacgttcctcccaggacatcactcctgtagacggcaccatggacccc
atcctccagagacgcaattcataccgtggccatgagtcagaggacagcatgtctacgctg
gcaggtcgccggggaatgaggcctaaaatgatgatgccctttgatgctcagccccctcag
cccgtgattagtgctcaccccatccattcccttgataaccatcaccaccattatcacctg
ggcagcctggcatcaccgacacacaactatctgcaacacacaggcagcccgcggcccctc
gcctcctccatctcttatctagacagggccgagtcgccagagtctgtaagaaacacaccc
actacggacttgctgcccgcttcggctcagccctcctgctccatcgatcactcggagacg
gacatcagttaccacagctcagcagctgaggacgagcccagctacaaccccccgacggca
cacgtacgccccacgcacccgctcaagagcttcgctgtgccctctgttcctgcccacgcc
tccgcctacgagggtgtctctctgcccagcacgcccctgctctctcagacaggagcccac
tccgtcaagaccgcctccatcgggacgctgggcaggacgaggacgcccatgcccgtaatc
gtgcccaacgcaccagacgtaccagacagcagcagaatgctggaggaatgcgagagtaag
tacgagaaggacgagctgtcggaggagatggcccacctggagggcttaatgaaggaccta
aacgccatcactacggcctga
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