Tachysurus vachellii: 132856894
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Entry
132856894 CDS
T09596
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc02010
ABC transporters
tvc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132856894 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132856894 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvc02000
]
132856894 (abca1b)
Transporters [BR:
tvc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132856894 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SRP54
Motif
Other DBs
NCBI-GeneID:
132856894
NCBI-ProteinID:
XP_060742742
LinkDB
All DBs
Position
14:10607002..10640616
Genome browser
AA seq
2282 aa
AA seq
DB search
MPVSTQLGLLLWKNFTYRRRQTFQLLIEIVWPLLIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELINAVKYMQNNSSGFRLKDFLNENETLSAFLMKNASLTENVVEDILMAEVNLE
KVLTRGYGVHLRNMCNTSTLEQFVKFPNRKVSDLTHNMICSSSHHWLNQAEKHFLANLDF
FRPLRSDIRSERNDTHYVTKATDNLLENLGSLAVELASMRSWSDLRNEILFLTQNATGSP
SQMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFKAMFGNYNNSDEEAVSVYDNTTTPYCN
NLIKNMETSPISRMIWRALKPLLMGKILYTPHTPATHKIIQEVNRTFQELGILRDLGGMW
EEARPKVWNFMESSEQVDLVRMLLQNNVTAYLFNARLSGTKWTVQDLSSFLTKHSEDTRP
PGTAFTWRNVFNETDQAIMSISRFMECVNLDKLEAVSTEEKLVNESLGLLDNRKFWAGIV
FPEIDLNSSELPPHVIYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDLRYVWGGFSYLQ
DVIEQSIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLMSAGLLVFALKMGNLLPYSDPGV
VFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWEDYVGLPAKV
IASILSPVAFGFGCEYFALFEEQGVGIQWSNLISSPMEGDDYSLTTAIILMYFDAFLYGV
MTWYIEAVFPGQYGIPRPWYFPFTKSYWFGEGELKQAPRIQGKKANAGAVCIEEEPTHLE
LGVYIQNLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIMGKDIRSELSAIRQSMGVCPQHNVLFSMLTVEEHIWFYARLKGLSEKKVMDEMDQIL
YDTGLPHKRKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRAGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKKDPEA
SLSSSRNSTTTESYIKKDEEDSESSSDAGLGSDHESDAATAIGTSWTDSPVAPADITLIS
GLILKHVPNSRMVEDLGHEIIYILPYESAKDGAFVDLFRDLDDHLSDLGISSYGVSDTTL
EEIFLKVAEDSGVDTEMMSDGTLPVPRRRRHAFGADRQSCLKPVIEDDFDCNESEVEPDS
KETDHLSSTDGKGSYQVQGWSLMRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIAL
IFSLIVPPFGKYPSLALQPWMYEDQVTFISNDAPEDASTQKLLSALMEGPGFGTRCMEGE
PIPDVPCTMGEEEWSIPEVPENVWDVFRHENWTMENPSPECECSCDGKKKMLPECPASAG
GLPPPQIMISERDTLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYGGFSLGARST
QVLPPAEEIDDAISRVREIFKLQKNSRTAADRFLNSLSAFINGLDTKNNVKIWFNNKGWH
SIGSFLSVMNNGILRANLPPEKDPSKYGITAYNHPLNLTKEQISQVALVTTSVDVLVSIC
VIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPYLYWVANFIWDMCNYIVPATLVIVI
FVCFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNILIGIN
GSVSTFVLELFGGDKVGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMSDALERFGENRF
RSPLEWDMVGKNLFAMAVEGIVFFIITVLIQYRFFIKPRAVHPKLSPIGEEDEDVARERQ
RIISGAGHGDILELRELTKVYERKKKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLT
GDSAVTSGEAFLARKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEGE
VCEVAEWGIRKLGLIKYAEKAAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKAR
RALWNCIHSIIKVGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYT
IVLKVTGPKPDLQPVMKFIEMELPGSILKEKHRNMLQYQLPSSLSSLVHIFSILAKHKDF
LQIEDYSVSQTTLDQVFVNFAKDQSDDHCDHSIRRKETVVNIPLLSLPATLKDEENHKES
FV
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtctccactcagctgggtctgctgctatggaagaacttcacttataggagacga
caaacgttccagctgctaattgagattgtctggcccctcttaatcttcttcatcttgatt
gctgtgagactgaactaccccccatatgagcaacatgagtgtcactttcctaacaaagcc
atgccctcagcaggcaccctgccatggatccagggcattgtgtgtaacgccaataaccca
tgtttccgtcaccccaccccaggagaatccccaggagtagtcggcaactttaacgattcc
attatatcacgacttttttcggatgccaagaaaatcctcctgtacagtcaaaatgacaag
agtctggatgggtttaaagagttaatcaacgcagtgaaatacatgcagaacaacagttca
ggtttcaggcttaaagacttcctaaatgaaaatgagaccctgtctgcattcctcatgaaa
aatgcttccctcacagagaatgttgtagaggacattctgatggcagaagttaacctggaa
aaggtgctaacacgaggatatggggtacatctgaggaacatgtgtaacacttccaccttg
gagcaatttgtgaagttcccaaacagaaaagtatcagacctcactcacaatatgatctgc
agctcatctcaccactggctgaaccaagctgagaaacacttcttggccaacctggacttc
ttcagacctctaaggtcagacataagatctgaaagaaatgacacccattacgtcaccaaa
gccacagacaacctcttggaaaacctgggttctttagctgtggagttggccagcatgcgg
agctggagtgacctgcgcaatgagatcctcttcctgacccagaatgccactggttcaccc
agtcagatgtaccaggcagtgtcaagaatagtgtgtggacaccctgaaggtggtggcctc
aaaatcaagtctcttaactggtacgaggacagcaacttcaaagcaatgtttggcaactac
aataacagtgatgaggaggctgtttcagtctacgacaacacaaccactccctactgtaac
aatctaatcaagaacatggagactagccctatctctcggatgatctggagagcgctcaag
cctctgctgatggggaagattctgtacacacctcacacccctgcgacacataagatcatc
caagaggtcaacaggacatttcaggagttgggaattctccgagatctgggcgggatgtgg
gaagaggccaggcccaaggtgtggaacttcatggagagcagtgaacaggtggacctagta
cggatgttactacagaacaatgtcacagcctatttgttcaatgccaggctgagcggtact
aagtggactgtgcaggatcttagcagtttcctgaccaagcattcggaggacactcgtcca
cctgggacagcattcacatggagaaatgtctttaatgagactgatcaagctattatgagc
atatcccgtttcatggagtgtgtgaatctagataaattagaggctgtgagcactgaggag
aagttagtgaatgagtcccttggtctgctggacaacaggaagttctgggctggaattgtg
ttccctgagatcgatctaaacagctctgagcttcctccccatgttatctacaaaattcgt
atggacattgacaacgtggagcgcaccaacaagatcaaggatgcgtactgggaccctgga
cccagagctgacccatttgaggatttgcggtacgtttggggtggtttctcttacctccag
gatgttatagagcagagcatcatcagagcagtaacaggaactaaagagaagacaggagtt
tacatccagcagatgccttacccatgctatgtcgacgatattttcttgcgtgtgatgagt
cgctctatgcccctcttcatgaccctagcctggatgtactctgtggctattataataaag
ggtgttgtctatgagaaggaagcacgtctcaaggagacaatgaggattatgggcttggac
aatggtatattgtggttcagctggttcatcagcagtcttatcccacttctgatgagtgct
ggactattagtgtttgcgctcaagatggggaacctgcttccctacagtgaccctggtgtg
gtcttcctttttttgggctcctttgctgtggtaactatcatgcagtgtttcctgatcagc
acagcctttgctcgagcaaacctggctgcagcgtgtggaggcatcatctacttcactctc
tatttgccatacgtgctgtgtgttgcttgggaggattatgttggtcttcctgctaaagta
attgctagtatactctctccagtggcctttgggtttggctgtgagtactttgcgctattt
gaagaacagggagtggggattcagtggagcaatctcatctctagcccaatggaaggggac
gactacagtctcactactgccattattctgatgtactttgatgctttcctctatggagtc
atgacctggtacattgaggctgtgtttcctggtcagtatggtattcccagaccatggtac
ttcccattcaccaaatcttactggtttggagaaggagagttaaagcaggcacccagaata
cagggaaagaaggcaaatgctggagctgtgtgcatagaggaagagcccactcatcttgaa
ctgggggtgtatattcagaacttagtgaaggtctatcggcacggcaaaaagcttgctgtg
gatggtcttacactgggattctacgagggtcagattacatcctttctggggcacaacgga
gcaggaaaaaccaccacaatgtccatcctgactggtttgtttccaccaacatctggcaca
gcatacatcatgggcaaagatatccggtctgagctaagtgctatccggcagagcatggga
gtttgtcctcagcacaatgtcctcttcagcatgctgacggtggaggagcacatctggttt
tacgcacggctcaaaggcctctctgaaaagaaggtgatggatgagatggatcagatattg
tacgacaccggtctgccacataaacgcaaatccaagaccagccagctttctggtggcatg
caaaggaagctttcagtggcccttgcatttgtaggagggtcaaaggtggtcattctggat
gagccaactgctggagtagacccctacgctcgcaggggcatctgggacctcctgctgaaa
tatcgtgcaggacgaaccatcatcctttccactcatcacatggatgaagcagacatcttg
ggtgatcgtattgccatcatctcacatgggaaactatgctgtgtgggctcctctcttttc
ctgaaaacacatctgggaactggatattacttgacactggttaagaaggatccagaagct
tctctgagctccagcagaaactccaccaccaccgagtcttatattaagaaggatgaagaa
gactcagagagcagttcagatgccggtttgggcagcgaccatgaaagtgatgctgccaca
gctattggcacctcatggactgattcacctgttgcacctgcagacatcactctaatctca
ggtctgattctcaagcatgtccctaactctcgcatggtggaagatctgggacatgagatc
atctatatcctgccatatgaatcagctaaagatggtgcctttgttgatctcttccgtgat
ttggatgaccacctttctgatttgggcatctcaagttatggtgtttcagacaccacactt
gaagagattttcctgaaagtagcagaggacagtggggttgatactgaaatgatgtcagac
ggcactctccctgtacccagacgcaggcgacatgcttttggagctgatcgccagagctgc
cttaaacctgtgattgaagacgattttgactgcaatgaatctgaagttgagccagattcc
aaagagacggatcacttaagtagcacagatggtaaaggttcataccaagtccagggctgg
agcctgatgagacagcagtttgtagctttgctgtggaaaaggttcctctatgctcgccgc
tccaggaaaggcttctttgcccagattgttctgcctgctgtgtttgtgtgcatcgctctg
atcttcagtcttattgttcccccctttggaaaataccccagtcttgccctgcagccatgg
atgtatgaagaccaagttacctttatcagcaacgatgcacctgaagatgccagcactcag
aaattactctctgcattaatggaaggccctgggtttggaacacgctgcatggaaggagaa
ccaataccagatgttccttgtactatgggtgaggaggaatggtccataccagaggtccct
gaaaatgtctgggatgtattcaggcatgaaaactggaccatggaaaacccatctccagag
tgtgagtgcagctgtgatggcaagaaaaaaatgctcccagaatgccctgctagtgctgga
ggacttccacctccacagataatgatcagtgagagagacacacttcaaaacctgactgga
agaaacatatctgactacttggtgaaaacatatgcgcaaattataggcaaaagtttgaag
aacaaggtgtgggtcaatgagttcagatatggaggtttttcactgggagccagaagcact
caggttctcccacctgctgaagaaattgatgatgccatttctcgagtaagggaaatattc
aaactgcagaagaactcaaggacagcagctgaccgctttcttaacagtctgtctgctttc
atcaatggtctggacactaaaaataatgtgaagatctggttcaataacaagggctggcac
agcattgggtctttcctcagcgtgatgaacaacggtattctgcgggccaatctgcctcca
gagaaggaccccagcaaatatggcatcacagcctacaatcaccctttgaaccttaccaaa
gagcaaatctcccaggtggcactggtgacaacttcagtggatgtactggtgtctatctgc
gttatctttgccatgtcattcgtccctgccagttttgttgtttttctcatccaagaacgt
gtgagcaaggccaagcatatgcagttcatcagtggagtacagccatacctctactgggtg
gctaattttatctgggatatgtgcaattacatcgtccctgcaacactggtcatagtcatt
tttgtgtgcttccaacaaaaagcctacgtgtcttccaccaatctgccagttctcgccctg
ttgctgcttctgtatggatggtctatcacacctctgatgtatccggcctccttcctgttc
aagatccctagcacggcatacgttgtcttgaccagtgtcaacatactgattgggattaac
ggcagtgtgtctacttttgttctggagttgttcggtggtgataaagtaggtggcatcaat
gacattctgaagaacgtgctcttgatcttccctcacttctgtctgggacgaggcttgatt
gacatggtgaagaatcaggccatgtctgatgctctggagagatttggagaaaaccgtttc
cgctcccctttggaatgggacatggtgggtaagaacctgtttgccatggcagtggaaggt
atagtcttcttcattatcaccgtcctcatccagtaccgcttcttcatcaaacccagagct
gttcaccctaagctgagtccgataggcgaggaagatgaggatgtggccagggaacggcag
agaatcatcagtggagcaggacatggagacatccttgagctccgagagctcacaaaggtg
tatgagaggaaaaagaagcctgctgtggataggctttgtgtgggaattcctccaggagag
tgctttggtctgcttggagtgaacggagctgggaagacaagtacctttaaaatgctgaca
ggagattctgcagttaccagtggagaagcattcctagctaggaagagtatactcagggaa
atagatgaggtacatcaaaacatgggctattgtccacagtttgatgccatcaatgacctg
ctgacaggcagagaacatcttgagttctatgccatcctgcgtggtgttcccgaaggggaa
gtgtgtgaggtggctgagtggggcatccgtaagctgggactcataaaatatgctgaaaaa
gcagctggaagctacagtgggggcaacatgcgcaaactctctacagccatagccctcatc
ggaggccccccagtggtctttctggatgaacccaccactggcatggaccccaaggcccgc
agagctctgtggaactgcatccacagcatcatcaaggttgggcgctcagtagtgctgact
tcacacagcatggaggagtgtgaggctctgtgcaccagaatggccatcatggtaaatggc
agattccgctgtctaggaagcgtccaacatctgaaaaacaggtttggtgacggatacaca
atcgtcttaaaagtgacaggacccaaaccagacctacaacccgtgatgaagtttattgag
atggagctgcctggcagtatactgaaggagaaacacagaaacatgctgcagtaccagctg
ccctcatccctgtcctcccttgttcacatcttcagcattcttgctaagcacaaagatttt
ctccagatagaggattactctgtttcccagaccacactggaccaggtgtttgttaatttt
gccaaggaccaaagtgacgatcactgtgaccactctatacggcgtaaagaaacagtagta
aacattccactgctcagcttgccagcaactttaaaggatgaggagaaccacaaggagagt
tttgtgtga
DBGET
integrated database retrieval system
