Tachysurus vachellii: 132856926
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Entry
132856926 CDS
T09596
Symbol
neo1b
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
tvc
Tachysurus vachellii
Pathway
tvc04350
TGF-beta signaling pathway
tvc04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
132856926 (neo1b)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132856926 (neo1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132856926 (neo1b)
Cell adhesion molecules [BR:
tvc04515
]
Immunoglobulin superfamily
DCC/UNC5 family
132856926 (neo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Neogenin_C
I-set
Ig_3
ig
Ig_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
fn3_SORL1
Ig_Rha78A_N
NDNF
fn3_2
Ig_4
Izumo-Ig
F5_F8_type_C
V-set_CD47
Sp38
GBS104-like_Ig
SusE
TMEM154
ASMase_C
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
132856926
NCBI-ProteinID:
XP_060742787
LinkDB
All DBs
Position
14:complement(21279857..21434784)
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AA seq
1442 aa
AA seq
DB search
MAELRARLFLFISALIISLNAAVADKGSAVRPFTRLLFSVEPLDVSAVRGLPAVLNCSVV
SEYPVRVEWKKDGTFLNLAADERRRLLPDGSLFISTVEHSVYNKPDEGMYQCVASIDNLG
TIISRAARVTVPGLPHFASQPESVSVYPGGNEVLICEVSADLAPFTHWQRNGQTVETGVR
LVKLPNSALVISNASQDDAGAYRCIIEGLGPAKTSQDAQLELLPASAVDERMEVLMGPSA
VSKPVGGTVLLPCVVKGVPFPVIRWTRNSKVIDESDERFAIIGGGSLQIVNLTEDDAGTY
SCQADNGNETIETQAELNVQVPPRFLKKPSNMYAHEAMDIIFECDVVGSPAPTVKWVKNG
DAVIPSDYFKIVNQHDLQVLGLVKSDEGFYQCVAENEVGNTQASAQLIILDLDIALPTSP
VPSLTSATTDHVDSGERSGSVPSPPRDLVASLVSTRFIKLTWRLPAEPHGDNLTFSVFYS
LDGSSRERVENTTAPGELQVTIDNLIPDTKYTFRVVASNRNGLGESSAPLTVATQPEVQV
PGPAPNLQAVSVTPTTVTLTWDRPLTGNGEIQTYKLYYSEKGKDVEQDTDVVGLSYTMTG
LKKFTLYSFRVVAYNKHGPGVSTDDLMVHTLSDVPGAAPQNVSLEVQNSRSIMVRWQPPP
PGAQNGELTGYKIRYRKAGRKGDAAEIVTNQLFQLIDGLERGTEYSFRLSAITVNGSGPS
TEWISAETFENDLDESQVPGVPSSLHVRPLVNSIVVSWTPPENQDIVVRGYSIGYGIGSP
HSQTIKVDYKQRYYSIENLDPSSHYVLTLKAFNNMGEGIPVYESAITRPQSGPIEPDIDL
FKIYHHTPHTPAPEPSPMLPPVGVQASVISHDAVKVSWADNSLSKNQKITDSRYYTVRWK
TNIPANTKYKVANTTTLTYTVTNLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTLETLPTS
APKDVTVVSKEGRPRTININWQPPSEANGKITGYIIYYSTDSNAEVHDWVVEPVMGNRLT
HQIQELTLDTAYYFKIQARNSKGMGPLSDTVHFRTPKAEPSDKMSSDQVGFPGKPGGRSP
LPDHGFGSSLDKPGITGSQENHILVIIIVSVGAFTIITVVVGAVLCTRHSNSHQKKKRAA
SKSSNASHKYKSTSKDLKPPDLWIHHERLEMKSIDKSPEPNVVMTETPIPRGTHEPSIGD
AAHQRQTTYRGHEVEESVSTLAGRRGVRPKIMMPFDSPPPQPVISAHPIHSLDHLHHHHH
HHYHPPPRGYLHHQISLRAPATPSSSGPYVDRPSSSESVRTQPPSSELPVASSPADLQHT
EVVIKEDDAHCYKPPTAHVHPTHPMKSFTVPTVTVSTHSTPSSALPCTVLMPPPVPGVKA
ACIGTLSRARAPVAVTVPSAPDQSESSKMLPQKESAYRTDELSEEMAHLEGLMKDLNAIT
TA
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgcgcgcgcgtctgttcctctttatttcagctctcatcatctctctgaat
gctgctgttgcagataaaggttctgcagtgaggccgttcactaggctgctgttctcggtg
gagccgctggatgtgtcagctgtacgtggtttgcctgctgtgttaaactgctcggtggtc
agcgagtatcccgtgagggtggagtggaagaaggacggcacgttcctgaacctggcggca
gacgagcgcagacgcctcctcccagacggctctctgttcatcagcaccgtggagcactct
gtttacaacaagcctgatgaaggcatgtaccagtgtgtggcctccattgacaacctgggc
accatcatcagccgcgctgcccgagtcaccgtgccaggtctgccgcattttgccagccaa
ccggagagtgtgtctgtatatcctgggggtaacgaggtgctaatctgtgaggtgagtgcg
gatctcgccccgttcacacactggcaaaggaacggtcagaccgtagaaacgggtgtgcgg
cttgtaaagctgcccaactcggctctggtgatcagcaacgcttcacaggacgatgccggt
gcgtatcgatgcatcatagagggactgggaccagccaagacgagccaagatgctcagcta
gagcttttaccagcctcagctgtcgatgagagaatggaagtcctaatgggtccgtctgct
gtgtccaagcccgtaggagggacggtgctgctgccatgtgtggtgaagggcgtcccattc
cctgtcattcgctggacgcggaacagcaaggtcattgatgagagtgatgaaagatttgct
ataattggtggaggcagcctgcagattgtgaatctgactgaggatgatgctggtacctac
agctgccaggcagacaacggcaatgagaccatcgaaacccaagcagagcttaacgtgcaa
gttccccctcggtttctaaagaagccctccaacatgtatgctcacgaggccatggatatt
atctttgagtgcgatgtcgtgggctccccagctccaacggtgaagtgggtgaagaacgga
gacgccgtcatccctagcgactactttaaaatagtgaatcagcatgatttgcaggttctg
ggattggtgaagtctgatgagggtttttatcagtgtgtggctgagaacgaggtcggtaac
acccaggccagcgctcagctcatcatcctggatctggacattgccctccccacatctcca
gtcccttcactgaccagtgccactactgaccatgtagactccggggagcgttcaggctcc
gtcccgtcaccgccgcgcgaccttgtggcttcgctcgtatccactcgcttcatcaaactc
acctggaggcttccggctgagccgcacggagacaacctcaccttctctgtcttctacagc
cttgatggctccagcagggagcgggttgagaacaccacagctccaggagaactgcaggtc
accattgacaacctcatccctgacactaagtacacattcagggtggtggcgtccaacaga
aacggcctgggtgaaagctctgctcctcttacagtggccacccagcctgaagtgcaggta
ccaggacctgcccccaacctgcaggctgtgtccgtcacacccactactgtcactttgacc
tgggacagaccactcacagggaacggcgagatccagacctataaactttactacagcgag
aaaggaaaggacgtggaacaggacacagatgttgtcggtttgtcttacacaatgacggga
ctgaagaagttcacactgtacagtttcagagtcgtggcttacaacaagcatggacctggt
gtgtctacagatgacctgatggtccacaccctttctgacgtaccaggcgcagcacctcaa
aacgtctctctcgaagtgcagaactcgaggagcattatggtacgatggcagcctcctcct
cctggcgctcagaacggggagctgacaggttataagatccgctacaggaaagctgggagg
aaaggagatgcagccgagatcgtaactaatcaactctttcagcttattgatggtttggaa
agaggaaccgagtactcgttccggctgtcggccatcacggtgaacggcagcggcccgtcg
accgagtggatctccgcagaaaccttcgagaacgatttggacgagtctcaggtacctgga
gtgcccagttcgctgcatgtgcgtccactggtgaatagcatcgtggtgagttggacacct
ccggaaaatcaggacattgtggtgagaggctacagcattggctatgggatcggcagtccc
cactctcagaccattaaagtggactacaagcagcgctactacagcattgaaaacctggac
ccaagctcgcactatgtgctcactctgaaagccttcaacaacatgggagagggaatacct
gtgtacgagagcgccatcaccaggccccagtcaggtcccatagagccagatattgattta
tttaaaatatatcatcataccccccacaccccagcacccgagccttcccccatgcttccc
ccagtgggcgtgcaagcctccgtcatcagccacgacgccgtgaaagtctcctgggctgat
aactcgctgtccaagaaccagaagatcaccgactccagatattacacagtccgctggaag
accaacatcccggccaacaccaagtataaggttgccaacaccaccactctaacatacacc
gtaacaaacctgaagcccaacacactgtacgagttctcggtcatggtgactaagggccgg
cgcagcagcacatggagcatgactgctcacggcaccaccttggagacacttcccacatcg
gcacctaaagacgtcactgtggtgagtaaagaaggtcgtccacgcaccatcaacatcaac
tggcagccgccatcagaagccaacggcaaaatcacaggctacataatttactacagtacg
gattccaacgcggaggtacacgactgggttgtagagccggtgatggggaacagactgacc
caccagattcaggagctcacactagacaccgcatattactttaagatccaggcgcgcaac
tccaaaggcatggggccgctctcggacacggtgcacttccgcacacccaaagctgagcct
tcagacaaaatgtcaagtgaccaagtaggctttccagggaagccaggtggacgttctccc
ctaccagatcatggatttgggtcctcgttggataagccaggaatcacaggcagtcaagag
aatcatatcctagtgatcatcattgtttctgtgggagcgttcaccatcatcactgtggtc
gtgggtgcagtcctgtgtacacgccactccaactcacatcagaaaaaaaagcgtgctgcc
agtaagtctagtaatgcctctcacaagtacaaaagcacttctaaagacctgaagcctcca
gacttgtggatccaccacgagcgactggagatgaagtcgatagacaaatcaccagagccc
aacgtggtgatgacggagacacccatcccgcgaggcacgcatgagccctccatcggcgac
gctgcacaccaaagacaaaccacctaccgaggtcatgaggttgaggagagcgtgtctacg
ctggcaggaagaaggggagtgagacccaaaataatgatgcccttcgactcaccgcctcca
caacctgttattagtgcacatcccatccactctctcgaccaccttcatcatcaccatcat
catcactatcatcctccaccgcgtggttacctccatcatcagatcagtctgagggctcct
gctacgccctcgtcctctggcccttatgtagacagaccttcttcttcagaatctgtaagg
actcagccaccttcctccgagctgccggtggcctccagcccagctgacctgcagcacaca
gaggttgtgattaaagaggacgatgcgcactgctataaacctcccacagcccacgtccac
cccacacaccccatgaagagcttcaccgtgccaactgtcactgtgtccactcacagcaca
cccagttctgccctgccctgcaccgtgctcatgcctccaccagttcctggtgtgaaggcg
gcatgtattggcaccctgagcagagcccgcgctcccgtggccgtcaccgttcccagcgct
cctgaccaatcagaaagcagcaagatgttgcctcagaaagagtctgcctacaggacagat
gagctgtcagaagaaatggcacatctggagggcttgatgaaagacctgaacgccatcacg
acggcctga
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