Tachysurus vachellii: 132857105
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Entry
132857105 CDS
T09596
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03022
Basal transcription factors
tvc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132857105 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
132857105 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132857105 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132857105 (gtf2h1)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132857105 (gtf2h1)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132857105 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
132857105
NCBI-ProteinID:
XP_060743066
LinkDB
All DBs
Position
14:21176413..21190966
Genome browser
AA seq
549 aa
AA seq
DB search
MTALSEEVLLVVKKVRQRKQDGTLYLMTERIAWGPEGKDRFTVSHPYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFANESTALKDRDAAKDLLQQLLPKFKKKANKELEEKNRMLQE
DPLLFQLYKDLVVSQIISAEEFWANRLKLSSVDLSMSNNNKQEVGISAAFLADIRPQTDG
CNGLRYNLTSDIIESVFRTYPTVKQKYAEHVPHNMTEKEFWTRFFQSHYFHRDRINTGQQ
DIFSECAKEDEKGLKVMVVQGVKNPMVDLQSLDDKLLDEGYGSLTVPSTSNSTKTVKENS
NSAIIKRFNHHSAMVLAAGLRKVEASTDQTSETSGTDGNSRDSDCFQQPIKKVKLQEAIE
YEDLENETRPKTIALNLKKSDRYSHGPVPLQSQHYTTSQDIISSVNCIQEEMSCYKPCLT
QVMSSSSASSAITALSPGGVLMQAGPQQTISQLVPSDVQNELKHLYIAAGELLRHFWSCF
PVNTPFLEEKVVKMQSNLERFQSTKLHPFQAKIQREYLSTNLISHLEEMIQAAYNKYHAW
QTRRMLRKT
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgacagccctgtcggaggaggtgctgctggtggtgaagaaggtccggcagagaaagcag
gatggtacgctttacctaatgaccgagcgcatagcctggggcccagaaggaaaagatcgc
ttcaccgtcagtcacccgtacgccgacatccgctgtcagaaaatcagtccagatggcaaa
gcaaagatccagcttcagttggtattacacacaggagagagcacaaccttccactttgct
aacgaaagcacggctctaaaggaccgggatgctgccaaagacctgctgcagcaacttctg
cccaagtttaaaaagaaagccaacaaagaacttgaagagaaaaacaggatgttacaggaa
gatccgttactgtttcagctctataaagacctggttgtgagtcagattatcagcgctgaa
gaattttgggccaaccgtctgaaattgagctctgtagatctctccatgtccaataacaac
aaacaggaagtgggaatatcagcagctttcctggcggacattagaccacagactgacggc
tgtaacggcctgagatacaacctgacctccgacatcattgaatcagtcttcagaacctac
cctacagtcaaacagaaatacgctgaacacgtgcctcacaacatgacggaaaaagagttc
tggacacgcttcttccagtcacactacttccacagagatcgcattaacactggccagcag
gatatcttttctgaatgcgccaaagaggacgagaaaggtttaaaagtcatggttgttcag
ggtgttaagaatcccatggtggatctgcagtccctcgatgataaattattagatgagggc
tacggctccttaacggttccttccacatccaactccaccaaaacggtaaaagagaatagc
aactcggccatcatcaaacgcttcaaccatcacagcgccatggtgctggcggccggccta
cgcaaagtggaagcatccactgaccagaccagtgagacaagtggcacagatgggaattcc
agagactcagactgctttcagcaacccattaaaaaggtgaaactgcaagaagctatagag
tatgaggacctggagaatgaaactaggcctaagacaattgctttgaatcttaagaaatct
gaccggtattcccacggtccagttcccctgcagtcccagcactacaccacaagtcaggac
atcatcagctcggtcaactgcattcaagaggaaatgagctgctacaaaccctgccttact
caggtgatgtccagcagttcagctagttcggctattacagccctttcacctggaggagtt
ttaatgcaagctggacctcaacaaaccatcagtcagttggtacccagtgatgttcagaac
gaactcaagcacttatacatagcagcaggggagctgctgcgacacttctggtcctgtttt
ccagtcaacacacccttcctggaggagaaggtggttaagatgcagtccaatctggagaga
ttccagtcaaccaagctccacccattccaggcgaagatccaacgggaatacttaagtacc
aatctgatcagccatctagaagagatgatccaggccgcctataacaagtaccatgcttgg
cagacacgccgtatgttgaggaaaacctga
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