Tachysurus vachellii: 132857173
Help
Entry
132857173 CDS
T09596
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
tvc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132857173 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
132857173 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132857173 (thoc5)
03041 Spliceosome [BR:
tvc03041
]
132857173 (thoc5)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132857173 (thoc5)
Spliceosome [BR:
tvc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132857173 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
132857173
NCBI-ProteinID:
XP_060743155
LinkDB
All DBs
Position
14:complement(23807424..23821493)
Genome browser
AA seq
684 aa
AA seq
DB search
MSSDPLKKRKTKVIRNDGGTPETKRLRGEGDQDVRTYNEEAELESRDPEQDYTLYKNTCE
TLATLMGEIQELKASGAKEGSVEVETKRKQGCVHFITLKKLNRLSHMRLKKARDQTHESK
QKVDVLHLQLQNLLYEVMHLQKEIGKCLEFKSQHEEIELVSVDEFFKEAPAEISRPHLTK
NDPHQLTLARLDWDLEQRKRLAEQYKSSLCTKEKILKGIELKKEYLSSLQPGLQAIMQAS
LPVQEYLSMPFEHVQKQTEVARHLPPPLYVLLVQASAYGQACDKNLSVSISGDVDEAKAL
SRPPEDSQDDESDSDAEEEQQNTKRRRGTVGVQLDDKRNKMLKRHPLSLCIDLKCKDGNV
LHLFFYYLMNLNILTVKAKVSASADLSGAISAGELLNPESLLNCLYASDDGQETPNPTNR
YQFDKVGITTFADYVLELGHPYIWVQKLGGLQFSSDTPQVEGVHSSLSASHMESTIKLLR
GRLLSRLALHKQFSSLEHSIVPVSTECQHLFPAKVVSRLARWTMMRYEDFLELGFVQHAV
KAGLVRETDLFFMAIVERGTARLQAAVVLNPRYPEITPLFSLSLLWKGERSGRTDDNLRA
LESEVNVFRSELQGPRPGLQLLTNQIQRLCVCLDVYLETESQVCDGSEGPIEFPREKMCL
RSVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatcctctgaagaagcggaagaccaaagtgatccggaatgatggagggacc
cctgaaaccaaacggcttcgaggagaaggagaccaggatgtgcgtacctacaatgaagaa
gcagaactggagagtcgagacccagaacaagattacacgctgtataaaaacacctgtgag
acattggctacactgatgggtgaaatccaagagctgaaagccagtggcgctaaagaaggg
agtgttgaggttgaaacaaagcgcaagcaaggatgtgttcacttcatcactctgaagaag
ctgaatcgtctgtctcacatgagactgaagaaagcacgcgatcagacgcacgagtcgaag
cagaaagtggacgtgttgcacctacagcttcagaatctcctctatgaagtcatgcatctt
cagaaagaaattggcaaatgccttgagttcaagtcccagcatgaagagattgagctggtc
agtgtggatgagttctttaaggaggccccagctgaaatctcccgccctcatctcaccaaa
aacgaccctcaccagctcacgcttgctcggctggactgggatttggagcagaggaagagg
ttggctgagcagtataagagctcgctgtgcactaaggaaaagatcttgaaaggaattgag
ttgaagaaggagtatctgagcagtcttcagccaggcctacaggccatcatgcaggcgtct
ctgcccgtgcaggagtacttgtccatgccatttgagcatgtgcagaaacagaccgaggtc
gcacgacaccttcctccccctctgtacgtgctgcttgtgcaggccagtgcttatggacaa
gcttgtgacaagaatctgtccgtgtccatcagtggagatgtggatgaagccaaagctctt
tccagaccacccgaagattctcaagatgatgagagtgattctgatgcagaggaggaacaa
cagaacactaaacggcggcgaggtaccgttggggttcagctcgatgataagcgtaataaa
atgctgaaacgtcatcctctctcactgtgcatcgacctgaagtgtaaagatggcaacgtg
ttgcatctgtttttttattacctgatgaacctcaacattctcaccgtcaaagcgaaagtt
tcggcctcagcagacctctcgggagccatcagcgcaggggagctgctaaacccagaatct
ctgttgaactgcctgtatgcttctgatgacggccaagaaacccccaaccctaccaaccgc
taccagtttgacaaagtgggcatcacaacatttgctgattatgtgttggaacttggacat
ccatacatctgggtgcagaagcttggaggattacagttttccagtgacacaccacaggtt
gaaggggtgcacagctctcttagtgccagtcatatggagagcaccatcaagctgctgaga
ggacgtctgctgtctcgtctggctttgcacaagcagttcagctctttagagcacagcata
gttcccgtgtccaccgagtgtcagcatctcttcccagctaaagtggtctcacgcctggct
cgctggactatgatgcgctacgaggatttcctggagttaggatttgtgcagcacgcggtg
aaggctggcctggtgcgggagaccgacctgttcttcatggcaattgtggagaggggaaca
gctcgtcttcaggctgcagtggtgttgaatccacgctatccagagatcacacctctcttc
tcactctcactgctctggaaaggagagcgcagcggccgcaccgacgataacctgcgggca
ttggagagcgaggtgaatgtgtttagatctgaactacagggacctcgaccaggcctgcag
ctcctgaccaatcagatccagcgtctgtgtgtgtgtctcgacgtgtatctggagaccgaa
agccaagtgtgtgacggctcagagggcccaatagaattcccaagggagaagatgtgctta
cgctctgtcaggggacctaatcgtctgaagccttttaagtacaaccacccgcagggcttt
ttcagtcatcgttaa
DBGET
integrated database retrieval system
