Tachysurus vachellii: 132857477
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Entry
132857477 CDS
T09596
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132857477 (caprin2)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
132857477 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
132857477
NCBI-ProteinID:
XP_060743426
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All DBs
Position
14:19476261..19484250
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AA seq
925 aa
AA seq
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MRETRTMVQLFRVQSSDATALSELMEERDGGRDGSPGTGSPHSLTALQFALNPSSTVYHG
YETYIEDGLICLRHKIRNIEKKKLKLEGYQMRLKNGEKLNQDQMDAVGRYEEVVHNLTFA
KELQKTLCALTQDLLTVQRKAMLHEQVQMAEAEQRRLSMMLQVQYVLCSLQRHDVRKTFS
TREHARFLSAEEVEKLLNLALLLACKRDENMRLEDQMEQASFVYLDLLDGKDKPVAGSTY
KCLKEKILSLVDSGLFDRIPEPKKDTKKSEEQTPDALSTSGMLPAGDSLKSDVASRQFLN
RRYIMERDLTRPLLGQGKEMKVQSPTWKSEFVTVKEQEPPDSWDMEFSDPAVPSKPVLQK
PWKGPAGFIPKSMVTLKSAATSKQKRQIKNKGSQGSKSDGEVKRAGPVEVFNSPSSLAKD
PALRRQQLDHLMDQITGSFSFMQDSLLDGEAMPGNSQSRALGLAPGIILNSIHAQREQMI
PADIMPPSQNSTPIHGHQHSGDAQSPLANGNQLTDTTDLKLHTEDGPHTEKQPLSNGEVP
PTVLAQTFTTPPSRRSLPTTSTTSFSSLHSVFSGKVPMTRSSEVKTDESGFLGSVCLSYS
TASTLSHSTVSTQTPPELSLPQEDLQMESAYISESEISATSQVYSSPGPYSAPQSSLVQH
YYPRSTLRGMTHGTRGLSHSSFRSPGASRGGYEVHRVNARAPGGGFSAQTQRDTGSVLYT
SQENGYQPSLKRTGGTAARRTSSVGWSDSSQVSSPDREGTYIIDSAHGDTLTIAGSGAPI
TGPPHTLMHVYPQIRVAFSAARATNLAPGTLDQPIAFDLLHSNLGGAFDAPSGHFSCPAA
GTYVFFFHILKLAISVPLYINLMRNDEVVASAYANDGAPDHETASNHAVLPLRIGDHIWL
RLHRGAIYGSSWKYSTFSGFLLYPD
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagagagacacggaccatggttcagctgttcagggttcaatcctcggatgccacggct
ctctcagagttgatggaagaaagggatggcgggcgagatggcagcccgggcacaggttct
cctcactcgcttacagccctgcagttcgccctgaacccctcatccaccgtctaccacgga
tacgagacctacattgaggacgggctcatctgcctcaggcacaagatccgcaacattgag
aaaaagaagctcaagctggaaggctaccaaatgcggctgaagaatggtgaaaagctgaat
caagaccaaatggatgcggtagggaggtatgaagaagtggttcacaacctgacgttcgcc
aaagagttacagaaaaccctctgtgcgctcactcaggatctgttgacggttcagaggaag
gccatgctgcacgagcaggtccagatggccgaggcggaacaaaggcgtctgagtatgatg
ctgcaggtgcagtatgtcctttgtagtctccagagacacgatgtcaggaaaaccttcagc
acgcgtgaacatgctcgcttcctgtctgcggaggaagtggagaagctgctgaacctggct
ttgttattggcttgcaagcgggatgagaacatgagattagaggatcagatggaacaggcc
tcgtttgtttacctggacctactggatggaaaagacaaaccagttgctggttcaacctat
aaatgtctgaaggaaaagattctcagtctggtggactctggtttatttgatcgtattcca
gagcctaaaaaagataccaagaagagtgaggaacaaactcctgatgcgttgtctacatca
ggcatgttgccggcaggggacagtttgaaatctgacgtggcttcacggcagtttttaaat
agacgctacataatggagcgtgacctcaccaggcccttgctgggtcagggcaaggagatg
aaggtgcagtcaccaacctggaagtctgagtttgtaaccgtgaaggaacaggaaccacca
gactcttgggatatggagttttctgatccagcagtaccctccaaaccggtgctacagaag
ccttggaaaggaccagcaggattcatacccaaatccatggtcacactgaagtctgctgct
acgagcaaacagaaacggcagataaaaaataaaggaagccaaggctctaaatcagatggc
gaggttaagagggctggacccgtggaggtgtttaactctccatcctctctggctaaggat
cctgcattgcgcagacaacagctggaccacctgatggaccagataactggctccttcagc
tttatgcaggactctttgctggatggagaagccatgcctggaaacagccaaagcagagcg
ctgggtctggctcctggtataatcctcaattcgatacacgctcagagagaacagatgatc
ccagctgacatcatgcctccatctcagaattcgactcccattcatggccaccagcattct
ggagatgcccaaagccctctggctaatggaaatcaactcacagacaccacagacctgaag
ctgcacactgaagatggaccacatacagaaaagcagccactctctaatggagaagttccc
ccgactgttctggcgcagaccttcaccactccacccagtagacgatctctacccacaacc
agcaccacgtccttcagcagcctgcactcagtgtttagcggaaaggttcctatgaccagg
agctctgaggtgaaaactgacgaaagtggctttttaggatcagtgtgtctgagttacagt
actgcaagcacactgagccactccaccgtgagcacacagaccccaccggagctcagcctg
ccgcaagaagacctgcagatggagagtgcatacatttcagaaagcgagatcagcgctacc
agtcaggtttattcatctcctggtccatattctgcccctcagtctagtctggtgcagcat
tattacccccgcagtacgctcagaggtatgacacatggtacaagaggactctctcactcc
tcattccgctcacctggggcttccagaggtggctatgaggtgcacagagtaaacgcacgt
gcacctggaggaggttttagtgcccagacccaacgtgacactggatcagttctgtacacc
tcccaggaaaacgggtatcagccgagtcttaaacgtaccggaggcacagcagctcggagg
accagctcagttggttggagtgactcttcccaggtgagcagcccagatcgtgagggtacc
tacataattgactctgctcatggtgacacgctgaccatcgcggggtctggtgcaccaatc
actggtcctcctcacaccctaatgcatgtgtacccccaaattcgtgtggccttttcagct
gcccgtgccacaaacttggcaccgggtactctggatcagcccatcgccttcgatcttctc
cacagcaatctaggtggtgcttttgatgcgccctctggccacttttcctgcccggcagca
ggcacatatgtcttcttcttccacatccttaagctggccattagtgtgccgctttatatc
aatctgatgcgcaatgatgaggttgtggcttcggcgtacgccaacgacggcgcacccgac
cacgagacggccagcaaccacgccgtgctgcctctgcgcatcggcgatcacatctggctg
cgcctccaccgtggcgccatctatggcagtagctggaagtacagcaccttctcaggcttc
ctgctctacccggactga
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