Tachysurus vachellii: 132857513
Help
Entry
132857513 CDS
T09596
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132857513 (lingo1a)
Membrane trafficking [BR:
tvc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
132857513 (lingo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
Ig_C17orf99
V-set
Motif
Other DBs
NCBI-GeneID:
132857513
NCBI-ProteinID:
XP_060743479
LinkDB
All DBs
Position
14:complement(17856397..17887612)
Genome browser
AA seq
615 aa
AA seq
DB search
MVAVEVSGHSYLVACWQPILILMLATVLSGSTTGCPSRCECNAQERAVVCHRKKLMSIPE
GIPSETRFLDLSKNRIKTINPEEFSGFPNLEELELNENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLHSLEVGDNDLVFISHRAF
HGLNSLEHLTLEKCNLTFVPTEAFAHLHSLNTLCLRNLNINSIRDYSFKRLSRLKVLEIA
NWPYLDTMTTNCLYGLNLTSLSITNANLTSIPYVALRHLVYLRFLNMSYNPIAVIEGNKL
HDLLRLQEFHLVGGRLAIIEPYSFRGLNYLKILNVSGNALSTLEESVFHSVGNLETLVLY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCTSPEFVQGKEFKDFPDILQPNYFTCRKSRIR
DRKAQQMYVDEGTTVHFACQADGDPAPVIMWLSPQKQFITPKTIGRLTMFPDGTLEVRYA
QIQDNGTYACIASNAGGNDSALAHLHVHSYSPDWPNQLNKTFAFISNQPSDSGANGTKAT
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGLS
SGTADAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtggcagtggaagtaagtgggcacagctacctggtggcatgctggcagcccatccta
attctaatgcttgccactgtgctctctggatctaccaccggctgcccatcccggtgtgaa
tgcaatgcccaggaacgtgctgttgtgtgccaccgcaaaaagttgatgtcaattcctgag
ggtattccatctgagacaagattcctagacctcagtaagaaccgcattaaaacaattaac
ccagaggagttctctgggtttcccaacttggaggagctggagttgaatgaaaacaccata
tccaccattgaacctggggcctttaacaacctgtatggacttcggactcttgggctgcgc
agcaataagcttaaacttattcaactaggtgtattcactggcctcagtaaccttaccaag
cttgatatcagtgagaataaaatagttatcctgctagattacatgttccaggatctctac
aacctacactctctggaagtgggtgacaatgatctggtgtttatatcccaccgagcattc
catggcctcaacagcctggaacatctgacactggaaaagtgcaaccttacctttgttccc
acagaggccttcgctcatttgcatagcctcaacactttgtgtctgcgcaacctcaacatt
aacagcatcagagattattctttcaaacgcctctcccgtctcaaagttctggagatcgct
aattggccatacctggacacgatgactactaactgcttgtacggtttgaatcttacatcc
ttatcaatcaccaatgccaatttaacttcaatcccatacgtggcgctccggcacctggtt
tacctacgattcttaaatatgtcttacaaccccattgcagtcattgaagggaacaagctt
catgatctgctcagacttcaggagtttcacttggttggtggaagactggccataatagag
ccatactcatttagaggactcaactatctaaagatcctgaatgtgtcagggaatgctctg
tctaccttggaagaatcagtttttcactcagtggggaacctggaaacactggtgctttat
gacaaccctctggcatgtgactgtaggcttctctgggtgttccgtcggagatggaggctc
aatttcaaccgccagcaacccacatgcacctcaccggagttcgtccagggaaaagagttc
aaagatttccctgacatcttacagcctaattacttcacatgtcgcaaatcaagaatccgg
gaccgcaaagcacagcagatgtatgtggatgaaggaactactgtgcattttgcatgccag
gcagatggcgatccagccccggtgatcatgtggctttcgcctcaaaaacagttcattacc
cccaaaacaataggaagacttaccatgtttcctgatggtactttagaagtgcgctacgct
cagatccaagataatgggacgtatgcatgtattgcaagtaatgcaggtggaaatgacagt
gctcttgctcaccttcatgtccacagctactctcctgactggcccaaccagctcaacaag
acctttgctttcatttctaaccagcccagtgacagcggagccaatgggacgaaagctact
gttcctttccccttcgacatcaagactcttatcattgccaccactatgggattcatctcc
ttccttggtgttgtgttattctgtttagtactgctgtttctgtggagccggggtaaaggt
aacaccaaacacaacatcgagatcgagtatgtaccacgtaaatcagatgcaggactaagc
agtggtactgctgatgcacctcgcaaatttaatatgaaaatgatttaa
DBGET
integrated database retrieval system
