Tachysurus vachellii: 132857516
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Entry
132857516 CDS
T09596
Symbol
snupn
Name
(RefSeq) snurportin-1 isoform X1
KO
K13151
snurportin-1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132857516 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132857516 (snupn)
Spliceosome [BR:
tvc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
132857516 (snupn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
mRNA_cap_enzyme
Com_YlbF
TPR_TTI1_C
DUF6076
Piezo_TM25-28
Motif
Other DBs
NCBI-GeneID:
132857516
NCBI-ProteinID:
XP_060743482
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Position
14:complement(17603067..17609465)
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AA seq
420 aa
AA seq
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MILVNMIALREALYPDFHPLGEVHGHKGGRCYLRADHRIAFRNVTGAASSVLNIHNNRSV
MEALTEALSSSFCVTREDNSTSAPHPRLAQYKSKYSALDQDERRRKFLKEQKEKRLNYVN
HARRLADGDWTGTDSDEEEKQKSQEQDEVEDEGMEVEQHKKLPRHYANQLMLSEWLVDIP
AELSADWLLVVCPVGKRSLIVASKGSTSSYTKSGYCVNRFPSLLPGGNRHNSAMGKDYTI
LDCIYSEVDRTYYILDVMCWRGHPVYDCSTEFRFYWLQSKVEEVEGLSEICTRNPFRFVS
LTSISCTTESIQKGLAHDYSFGVDGLLFYHRETHYTPGSTPLVGWLRPYMVKDILGIEVP
ECPLTTKPDYALHQMQQILEHKKPSSQVRPADQYGRYELEHLSTPELQTGSGNQKESMDS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgatactcgtgaacatgattgcactacgtgaagcgttgtacccagattttcaccccctt
ggtgaagtgcacggacataagggaggacggtgctatttgagagctgaccatagaatcgca
ttcagaaacgtgaccggagcagctagcagcgtcctgaacatccataacaacaggtctgta
atggaagccctgactgaggcactgtcctccagcttctgtgtaaccagagaagacaacagt
acctcagccccacatcctcgcctggctcagtacaagagcaaatacagcgctttggaccag
gatgaacggcggaggaagttcctgaaggagcagaaggagaaaaggctaaactatgtgaat
cacgcccgccgtttggcagacggagactggacagggacggacagtgatgaggaagagaaa
cagaaaagtcaggagcaggatgaagtggaagacgaggggatggaggttgagcagcacaaa
aagttgccaaggcactacgccaaccagctgatgttgtcagagtggctggtggacatccct
gcagagcttagtgctgattggctcctggtggtctgtccagtagggaagcgctcgctcatc
gttgcatcaaagggttctacttcatcatacactaaaagtgggtactgtgtgaaccggttc
ccttctttgctcccaggaggaaacagacacaactcagccatggggaaagattacaccatc
ctggactgcatttacagtgaagtggacaggacgtactacatcctggatgtgatgtgctgg
agggggcatccagtctacgactgctcgactgagttccggttctactggttgcagtcgaag
gtggaagaggtagaaggactgtcggagatctgcacccgaaaccctttccggtttgtgagt
ctgaccagcatcagctgtacaacagagtccattcaaaagggcctggcgcacgactacagc
ttcggcgtggacgggctgctgttctaccaccgtgagactcactacaccccgggcagcacg
ccgctggtggggtggctcagaccctacatggtgaaagacatcctggggatcgaggtgcct
gagtgccccctcaccaccaagccagactatgctttacaccagatgcagcagatcctggag
cacaagaagccgtccagtcaggtccgacctgcggatcagtacggaagatacgagttagag
catctgtccacgccagagctgcaaacaggaagcggcaaccagaaagaaagcatggatagc
tga
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