Tachysurus vachellii: 132857533
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Entry
132857533 CDS
T09596
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132857533 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tvc03310
]
132857533 (roraa)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132857533 (roraa)
Nuclear receptors [BR:
tvc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
132857533 (roraa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
132857533
NCBI-ProteinID:
XP_060743503
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Position
14:complement(14756483..15007713)
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AA seq
519 aa
AA seq
DB search
MESPPDPTSEPGKSASEAASAVRESPLNLDALRKAEHQAPVRRHSCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQREQQQQPGEAEPLTP
TYGLSANGLTELHDDLSGYMDSHTADGTKPDSGVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFTPASGFFPYCSFSNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEMESYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDPQNNTVYFDGKYAGPDVFKSLGCDDLISSIFEFGKNLCSMHLSEDELALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRTHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcctcctgatccgacgagcgagccgggtaagagcgcctctgaggcggcgagc
gcggtcagggagagtccgctgaacctggacgctctgcggaaagccgagcaccaagcgccc
gtgcgcagacacagctgctcgagcactaacagaggtatttcagtaacaaagaagacacac
acttctcaaattgaaattattccctgcaagatctgtggagacaaatcatcaggcatccat
tatggtgtgataacatgtgagggctgtaagggtttcttcaggaggagtcagcagagcaat
gcggcatattcgtgcccacgtcaaaagaactgcctgatcgaccgcaccagccgaaaccgc
tgccagcactgcaggctgcagaagtgtctggccgtgggcatgtcacgggacgcggtgaag
ttcgggcgcatgtcaaagaagcagcgggatagcctgtacgctgaggtgcagaagcaccgt
ctccagcagcagcaaagggagcagcagcagcagccgggtgaggccgagccactcacaccc
acttacggtctctcagcaaacggcctcactgagcttcatgacgacctgagcggctacatg
gacagccacacagctgacggcaccaagcctgactcgggtgtcagcagcttctacctggac
atccagccctcacccgaccagtccggcctggacatcaacggcatcaagcccgagccaatc
tgcgacttcacgccagcctcaggcttcttcccatactgctccttcagcaacggcgagacc
tcccccaccgtctccatggccgagctagagcatctggcccagaatatctccaagtcccac
atggagacatgtcaatatctgagagaggagctgcagcagatgacctggcaggccttcctt
caggaggagatggagagctaccagaacaagcccagagaagtcatgtggcagttgtgtgcc
attaaaatcacagaggccatccagtacgtggtggagttcgccaagcgtatcgatggcttc
atggagctctgtcagaatgatcagattgtgctgctcaaagcaggctctttggaggtggtg
tttgtcagaatgtgtcgtgcctttgaccctcaaaacaacacagtctatttcgatggaaag
tatgccggccctgatgtgtttaagtcattaggttgtgacgacttgatcagctccatcttt
gagtttgggaaaaacttgtgttctatgcacctgtctgaggacgagctcgccctgttctca
gcatttgtgttgatgtctgcagaccgctcctggctccaggagaaggtgaaagtagagaag
ctacagcagaagatccagctggcccttcagcacgtcctgcagaagaatcacagagaggat
ggcatactaacaaagttaatatgcaaagtgtcgaccctgcgagcactgtgcagcaggcat
acagagaagctgaccgctttcaaagcaatatacccggacattgtgcgtacccatttcccg
cccttatacaaggagctctttggatcagactttgagcagtccatgcctgtggacgggtag
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