Tachysurus vachellii: 132858128
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Entry
132858128 CDS
T09596
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tvc
Tachysurus vachellii
Pathway
tvc04137
Mitophagy - animal
tvc04140
Autophagy - animal
tvc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132858128 (hif1al)
04137 Mitophagy - animal
132858128 (hif1al)
04148 Efferocytosis
132858128 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132858128 (hif1al)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
132858128 (hif1al)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-GeneID:
132858128
NCBI-ProteinID:
XP_060744329
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Position
15:complement(10446652..10458733)
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AA seq
661 aa
AA seq
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MTTSVGKRPSTEQRKVRLRDAARSRRSQETEVFYELAHSLPLTRRITSHLDKAGIMRVTL
SYLRIRQLLQSSLTKATPAEEEEEDPIDTFYQQALAGFIMVMSEEGDMVFLSENVSKFIG
ITQLELLGQSVYDYVHPCDQEELRDLLTTKLGLFKKKSDSCTECNFFLRLKSTLTSRGKT
VNIKSATWKVVHCVGYLKTLNQEGEDSSPAGSYMTLLCEPIPHPSYVEFPLDSNTFLTRH
NMDLHFNHCDGRVTELVGYNPSDLIGRSAYDFFHALDFDHLTRSLHILISKGQVCTSHYR
FLAKNGGFVWTETQATVLYNKKTSQPEAVVCLNFILSAVEEADTVFSIAQTRSDLMEDKL
SVIKVDDSEDEMISSSSSSSELFHRLKDNPEDLLQLAPAPGDTIIPLTEHSELFFGPPSS
PNTLPTCPKELCTPKLRQLLSPIFDNPDSSELVSVCLSLSLSLSLSHTHIHTPCCGKLMN
YYFCCGPQSSSDEILMDTGDVEKFFCKPEETQKKSMEDMDDMDLDMLAPYISMDEDFQLT
FLPQLPEAETQTDVSPTASKKRGLEEEEEIPSLTSNWEKRQKNCPIEEEYLLSHSSLMQV
AGGLEEMAPERWKQSQLLTDRDPVLGGTQTLCDTAALMRDSFSSQPPDLMTQLTGTVSSL
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgacgacttctgtgggtaaaaggccgagcactgagcagaggaaggtgcgcctgcgtgat
gcggctcgctctaggcggagtcaggaaacagaggtgttctacgaacttgcacactcattg
cccctgacacgccgcatcacctcccacttagacaaagctgggatcatgagggtaaccctc
agctacctgcgtatacgccaacttctccagtcttcattgaccaaggcaacaccagcagag
gaggaagaggaggatcccattgatacgttctaccaacaggcacttgctggctttatcatg
gtgatgagtgaagaaggggatatggtcttcctgtctgaaaatgtcagcaagtttatcggc
atcacacagctggagctgcttggccagagtgtgtacgattatgtccatccgtgtgatcaa
gaggagctgagagaccttcttaccaccaagctgggactctttaagaagaagtctgatagt
tgtacagagtgcaacttcttcctgagactgaaaagcacacttacgagccgtggaaaaacc
gtgaacatcaagtctgccacctggaaggtggttcactgcgttggctatttgaagacacta
aatcaggaaggagaagactcttcacccgcagggagctacatgaccctgctgtgtgaaccc
atcccacacccgagctatgtggaattccctctggacagcaacaccttcctcacacgccac
aacatggacctgcacttcaaccactgtgatggccgggtgacggagcttgttggatacaat
cccagtgacctgattggccgatctgcctatgattttttccatgcgcttgattttgatcat
ctgacaaggagcttgcatatcttgatctccaaaggtcaggtgtgcactagccattaccgc
ttcctggctaagaacggaggatttgtttggaccgaaacccaagctacggtgctatacaat
aagaagacctcgcagcctgaagctgtagtgtgcctcaacttcatcctcagtgcggtggaa
gaggcagacacagtgttctccattgcgcagacgcgcagtgacttgatggaggacaaactg
agtgtgattaaggtggatgactcagaggatgagatgattagcagcagcagcagcagcagc
gagcttttccaccgtttgaaggacaatccagaggatcttctgcagctggcaccagcccca
ggagataccatcataccactgacagagcatagcgagttgttctttggcccaccatccagc
cccaacacactgcccacatgtccaaaggaactatgtaccccaaaactccgccagctcctc
tcacccatatttgacaaccctgactcctctgaactggtgagtgtctgtctctctctctct
ctctctctctctctctcacacacacacatacacactccatgttgtggtaaattaatgaat
tattatttttgttgtggccctcagagctcgagcgatgagattctcatggacactggtgat
gtggagaagttcttctgcaagccagaggagactcaaaaaaagtcaatggaggatatggat
gacatggatctggatatgttggcaccatacatctccatggatgaagacttccagctgacc
ttcctaccacagttacctgaggcagagacacagactgatgtatcacccacagcttctaag
aaaagaggcctggaggaagaggaagaaataccatctctaacatctaactgggagaagaga
cagaagaactgccccatagaggaggaatatcttctctcacactcctcattgatgcaggtt
gcaggaggtttagaagagatggcgcctgagcgttggaaacagagtcagctcctgacagac
agagatcctgtgctgggaggaactcaaacactctgtgatacagcagctttgatgcgagat
tctttctcatcacaaccacctgatttaatgactcaattaactgggactgtatcgtcgctc
gcctga
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