Tachysurus vachellii: 132858148
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Entry
132858148 CDS
T09596
Symbol
cltcb
Name
(RefSeq) clathrin, heavy chain b (Hc)
KO
K04646
clathrin heavy chain
Organism
tvc
Tachysurus vachellii
Pathway
tvc04142
Lysosome
tvc04144
Endocytosis
tvc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132858148 (cltcb)
04142 Lysosome
132858148 (cltcb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132858148 (cltcb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132858148 (cltcb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvc04147
]
132858148 (cltcb)
Membrane trafficking [BR:
tvc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
132858148 (cltcb)
Exosome [BR:
tvc04147
]
Exosomal proteins
Proteins found in most exosomes
132858148 (cltcb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
132858148
NCBI-ProteinID:
XP_060744353
LinkDB
All DBs
Position
15:5930910..5952163
Genome browser
AA seq
1677 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMSDPNS
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTEDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPSGN
QPFPKKAVDVFFPPEAQNDFPVAMQISPKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTALHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDAERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GHAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPADAWKESQFKDIVTKVANVELYYRAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLSLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYQALRTSIDAYDNFDNISLAQSLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQE
EKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLDASESLR
KEEEQATEAQPIVYGTPQLMLTAGPSVPVPPQQPYGYGYTAPAGYGQPAQPGFGYGM
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctccagctccagaacctgggaatt
aacccagctaatattggcttcagcacgcttactatggaatctgacaagttcatctgcgtg
cgagaaaaggtgggcgagcaggcgcaggtggtcatcatcgacatgagcgaccccaattcg
cccatccgcaggcccatctcggcagatagcgcaatcatgaacccagccagcaaagtgatt
gccctcaaagctgcgaaaaccctgcagattttcaacatcgaaatgaagagcaagatgaag
gcacacaccatgactgaggatgtgacattctggaagtggatctccctgaacaccgtagca
cttgtgacagacaacgcagtctaccactggagtatggaaggcgactcgcaacctgttaaa
gtgttcgaccggcattccagcttagcaggctgccagattatcaactaccgcaccgacgcc
aaacagaaatggctccttctgattgggatttccgcacagcaaaaccgtgtggtcggagcg
atgcagctgtactctgtggacaggaaggtgtcacagcctatcgagggccacgctgcgggc
tttgctcagttcaaaatggaaggaaatgctgaagagtccacactgttttgctttgctgtt
cgtggtcaagctggaggaaagctccacattatcgaagtcggaacacctccgtctggcaat
cagcctttcccgaagaaagccgtagatgtgttctttccgccggaagcccagaacgacttc
cctgttgctatgcagatcagccccaagcaggatgtggtctttctcatcaccaaatatggc
tacattcacctgtatgaccttgaaactggcacttgcatctacatgaacaggatcagtggg
gagaccatctttgtcaccgctctccacgaggctacttctggcatcattggtgtcaacaga
aagggacaggtgctttcggtgtgtgtggaggaggagaacatcatcccctacatcaccaac
gtcctgcagaaccctgatctggcactgcgcatggctgtacgcaacaacttggctggcgct
gaggagctctttgcacgcaagttcaacactttgttcgcagggggcaactactctgaggct
gccaaagtagctgccaatgcaccaaagggaattttgcgaaccccagacaccattcggcgt
ttccagagcgttcccgcccagccaggccagacctctcctctgcttcagtacttcggcatc
ctgctggatcagggccagctcaacaagttcgagtccctggagctttgcaggcctgtactg
cagcagggtcgcaagcagctgctggagaagtggctaaaagaagataaactggagtgctct
gaagaactgggtgatttggtcaaatctgtggacccgactctcgctctcagtgtctacctg
agagcaaatgtccctaacaaagtgattcagtgttttgctgagactggacagtttcagaaa
atagtattgtatgcaaagaaggtcggttacactccggactggatctttctgcttcgaaac
gtgatgcggatcagtccagagcaaggcctgcagttctcccagatgctggtgcaggatgaa
gaacctcttgctgacattacccagattgtggatgtgttcatggagtacaacctgatccag
cagtgcacttccttcctgctggatgctctgaagaacaaccggcccaccgaaggccctctg
cagacacggctgctggagatgaacttgatgcatgctccacaggtggctgacgctatcttg
ggaaaccaaatgttcacccactacgaccgagctcatgtggcccagttgtgtgagaaagcc
ggattgctacagagagccctggaacactacactgacctgtatgacatcaaacgtgctgtg
gtgcacacccaccttctcaatcctgagtggctggtgaacttttttggctcgctgtcagtt
gaggattctctggagtgcctgagagccatgctctcggccaacatccgccagaacctgcag
atttgcgtccaggtggcctccaaataccacgagcaacttaccactcagtccctcaccgag
ctctttgagtcttttaagagctttgaagggctgttctactttcttggctccattgtgaac
ttcagtcaggatccagaggtccatttcaagtacattcaggcagcctgtaaaactggacag
atcaaagaggtggagagaatctgcagagagagcaactgctatgacgcggagcgtgtgaag
aattttcttaaggaagctaaactgaccgatcagctgcctctcatcattgtgtgtgaccgc
ttcgactttgtccacgacctggtcctttatctgtaccgcaacaatctgcagaaatacatt
gagatttacgtgcagaaggtgaaccccagccgcttacctgtggtgatcggtggactgttg
gacgtagactgctcagaggatgtcattaagaacctgatcctggtggtccgcggacagttt
tccaccgacgagctggtggccgaggtggaaaagaggaacaggctgaagctgctgctgccc
tggctggaagctcgtattcatgagggatgtgaagaacctgctacccacaatgccctggct
aagatctacatcgacagcaacaataaccctgagcgattcctcagagagaacccatactat
gacagccgtgtggtgggcaagtactgcgaaaagagggacccccatctggcttgtgtggct
tatgagagaggacagtgcgaccaagagcttattaatgtgtgcaatgaaaactccctcttc
aagagtctgtctcggtatttggtgcgtcgtaaggaccctgagctgtgggccagtgttctc
ctggagagcaacccctatagaaggccactgatagaccaggtggtgcagaccgcactctcg
gagacccaggacccagaagaggtgtccgttacagtgaaagccttcatgactgctgaccta
cctaacgaactgatcgagcttcttgagaagattgtcttggataactctgttttcagtgag
cacaggaacctgcaaaaccttctgatcctgacggccatcaaagctgatcgcactcgcgtg
atggaatacatcaaccgcctggacaactacgatgcccccgacatagccaacattgccatc
agcaacgagctctttgaagaggcttttgccatcttcaggaagtttgatgtcaacacatct
gcagtgcaggttcttattgagcacattggcaacctggaccgggcatatgaattcgctgaa
cgctgcaatgagcctgccgtgtggagccagttggctaaagctcagctgcagaaaggcctg
gtaaaggaagccatcgattcctacatcaaggctgatgacccatcggcatacatggaagta
ggacatgctgcagcccaaagtgggaactgggaggatttggtgaagttcttgcagatggca
cgcaagaaggcccgtgagtcatatgtagagactgagctgatctttgcattggctaaaacc
aaccgcctggctgaactggaggagtttatcaatggcccgaacaatgcccacatccaacaa
gttggtgatcgttgctatgatgagaagatgtacgaggcagctaagctgctgtacaacaac
gtgtccaacttcggccgcctggcttccactttggtccacctgggagagtaccaggctgct
gtggacggagcacgcaaggccaacagcacacgaacctggaaagaggtctgttttgcctgc
gttgatgggaaggaattccgtctggctcagatgtgcggcttgcatattgttgtccatgcc
gatgaacttgaggagctcattaactactaccaggaccgtggatattttgaggagctgatc
accatgttggaggcggctctggggctggagcgcgctcacatgggcatgttcaccgagttg
gccatcctctattccaagttcaaaccacagaagatgagggagcatctggaactcttctgg
tccagagtcaatattcccaaggtcttgagggcagcagaacaggctcatctgtgggctgag
ctggtcttcctttatgacaagtatgaagaatacgataatgctatcatcaccatgatgaac
caccctgccgatgcctggaaggagagccagttcaaagacattgttactaaggtggctaat
gtggagctgtattacagagccatccagttctatctggaattcaagcctctgttactgaac
gatttgcttatcgtcctgtccccaagactcgatcacacacgtgctgttaacttcttctct
aaggttaaacagctgtctctggttaaaccatacctgcgatctgtacagaaccacaacaac
aaatcggttaacgaagcactaaataatctcttcataatagaggaggactaccaggctctg
cgcacatccatcgatgcctacgacaacttcgataacatatctctggcccagagcctggag
aagcatgaactcattgagttcaggagaattgctgcctacctgttcaaaggcaacaaccgt
tggaagcaaagtgtggagctctgcaagaaggataaactctacaaggatgccatgcagtac
gcatcagagtcaaaggacacagagctggctgaggaactgctgcagtggttcctacaggag
gagaagaaggagtgcttcgccgcctgtctcttcacttgctatgacctcctgcggcccgac
gtggtgctggagacggcctggaggcacaacatcatggacttctccatgccctacttcatc
caggtcatgagggagtacctcagcaaggttgataagctggatgcatccgagtctttgagg
aaagaggaggagcaagccaccgaggcacaacccattgtttatggcacaccccagctgatg
ctcactgcaggcccaagcgtccctgttcctcctcagcagccttacggctatggctacacc
gcccccgctggttacggccagccagcgcagcccggctttggctacggcatgtag
DBGET
integrated database retrieval system
