Tachysurus vachellii: 132858173
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Entry
132858173 CDS
T09596
Symbol
ncam1b
Name
(RefSeq) neural cell adhesion molecule 1b isoform X1
KO
K06491
neural cell adhesion molecule
Organism
tvc
Tachysurus vachellii
Pathway
tvc03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tvc04514
Cell adhesion molecule (CAM) interaction
tvc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
132858173 (ncam1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132858173 (ncam1b)
04517 IgSF CAM signaling
132858173 (ncam1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132858173 (ncam1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132858173 (ncam1b)
04090 CD molecules [BR:
tvc04090
]
132858173 (ncam1b)
00536 Glycosaminoglycan binding proteins [BR:
tvc00536
]
132858173 (ncam1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tvc00537
]
132858173 (ncam1b)
04091 Lectins [BR:
tvc04091
]
132858173 (ncam1b)
Membrane trafficking [BR:
tvc04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
132858173 (ncam1b)
Cell adhesion molecules [BR:
tvc04515
]
Immunoglobulin superfamily
NCAM1/2
132858173 (ncam1b)
CD molecules [BR:
tvc04090
]
Proteins
132858173 (ncam1b)
Glycosaminoglycan binding proteins [BR:
tvc00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
132858173 (ncam1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tvc00537
]
Others
132858173 (ncam1b)
Lectins [BR:
tvc04091
]
I-type lectins (Siglecs)
132858173 (ncam1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
Ig_VEGFR-1-like_5th
fn3
V-set
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
V-set_CD47
Fn3_ROS1
Ig_PDGFR_d4
C2-set_2
Ig_ANOS1
Egh16-like
Motif
Other DBs
NCBI-GeneID:
132858173
NCBI-ProteinID:
XP_060744389
LinkDB
All DBs
Position
15:7270730..7369890
Genome browser
AA seq
1040 aa
AA seq
DB search
MRENRVMAMFLTKEIIFVFLFLGSAASLQVSIIPAQGEVSVGESKFFYCEVVGAVKGIDW
FSPSGEKIESSRQDITVIRNDETSSTLTIYNANADNAGTYKCVATSGDQQAEATVNVKIF
QKISFKNATSPQEFTEGDDAVIACDVISSPPPTITWKHKREKIQFEKDVRFKTLNNNHLQ
IRGIRKVDEGVYTCEARIMARGEIDFRDIRVVVNVVPTIRVRQVQVNATADISHSAMLAC
DADGFPEPTITWMRSPRSEVLLESGNKYSFNDDGSEITIMDVKKLDEGDYTCVARNKAGT
SEEEVSLQVFVKPKITYLENQTTTEMEEQFRLTCEATGDPTPSITWSFKEHIFPEGEQEH
LKRIYQASWTRPEQHKSEDGSVVVRSDFRVSSLTLKYVEYTDAGQYLCTASNPVGQSSQS
TFLEVRYAPKILGSVTVYTWEGNPANISCEILAHPSDVSIMWLRDGLQLPNANSTNVKIY
TTPNASYLQVNPDSQNDFGSYNCTASNEIGTESKEFILIQAEVPSAPSLTLVKPYSSTAE
VQFDVPEALGGVPVLKYRAEWRTAGKNKWVERVYEVREVLSAITITGLKPDTKYEVKMSA
INGKGEGESSAVVAFKTEPVREPSPPKLEVSPQSKGNALKVMWTKQDDGGSPITHYLIRY
KAKGDLEWKDELRVSSSSGHVLLSGLDWNTEYDVTVVAENQQGKSKPGSLNFRTSSEPSA
TPDYMEDGSGLSTGLIVGILILACVVLLLAVDATCCFVNKCGLLMCLCGKPGTSPKSKDV
ETGKAAFVKEDTKETRTEDGLTANHDVGGHAEPNETTPLTEPERQPEVTSTVVDLPLSLA
TNSDTITDTFDLSQCSPVSESTTLTSSLTAPPSEPKSAPKACSQPLDTSLISSDPPLVDL
ADSQTINQSAGQIKSAELDTQASPSLALSTEKEARDLEAEPMLLESPCEPRMLVTNPQTN
GAPPSSEDLVLQIDGDAPLTHFPQDGLHSLATADPSAPQNEKILEDGEIKAEEDELKKVQ
PEALAEPNAISQTNASETKA
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaaaccgagtgatggcaatgtttctgaccaaggagatcatcttcgtgtttctt
ttccttggcagcgcagcctctctccaagtgagcattatacctgcacaaggagaagtcagt
gtcggagagtccaagttcttttactgtgaagttgtcggcgcagtgaaaggaatcgactgg
ttctcaccaagcggagagaagattgaatccagcaggcaggacattacagtgatccgcaac
gacgagacatcctctacgctaactatctacaatgctaacgccgataatgccggcacttat
aagtgtgtagccaccagcggagaccagcaagctgaggctacagtgaacgtgaagatattc
caaaaaatttccttcaaaaacgccacatcaccacaggagtttaccgagggcgacgacgcc
gtcatcgcgtgtgacgtgatcagctctccgccacccacaatcacatggaaacacaaaagg
gaaaaaatccagttcgaaaaagacgttcgatttaagactttgaacaacaaccacctgcag
atcagagggataagaaaggtagacgaaggagtgtacacctgcgaggcacgcattatggct
cgaggcgagattgacttccgtgatatcagagttgtagtgaacgtcgttcccactatcaga
gtgcgacaagtccaagtaaacgccaccgccgacataagccactctgccatgctggcttgc
gatgcagacggcttccccgaacccacaatcacatggatgcgttctcccaggagcgaggtt
cttctagagagcgggaacaagtacagcttcaatgacgacggctcagagatcacaataatg
gatgtgaagaagttggatgaaggagattacacctgcgtcgccaggaacaaagccgggacg
agcgaagaagaagtcagcctccaagttttcgtaaaacccaaaatcacatacttggaaaac
cagaccactacggaaatggaggagcagttcaggctgacgtgcgaagccacaggagacccg
acacccagcatcacctggagctttaaggagcacatctttcccgaaggagaacaggagcat
ctaaagaggatttatcaggcatcttggactcgacctgaacaacacaagagtgaagatgga
agtgtggtggtccgcagtgacttccgtgtctcctctctgacacttaagtatgtcgagtac
accgacgctggacagtatctctgcacagccagcaacccagtaggccagagctcccagtct
acgttcctagaagtgcgctacgcgccaaaaatcctgggctcagtgacagtctacacgtgg
gaggggaatcctgccaacatcagctgcgagatcctggctcaccccagtgatgtgtctatc
atgtggctgcgagatggcctccagctgcccaacgctaactccaccaacgtcaaaatctat
accacccccaatgccagctacctgcaggttaacccggactcccagaacgactttggcagc
tacaactgcacggcttctaatgagatcgggactgaatccaaagagttcatcctgattcag
gctgaagttccctcggctccgagcctcactctggtgaaaccctactcaagcacggctgag
gtacagttcgatgtacctgaagctcttggaggagttcctgtgctcaagtaccgtgccgag
tggagaacagcagggaaaaacaaatgggtcgagcgcgtctatgaagtccgagaggtgctg
agtgcaatcacaatcacgggcttaaaaccagacacgaagtacgaagtcaagatgtctgct
atcaacggcaagggagaaggcgagagcagcgctgtagtcgccttcaagacagaacctgtt
cgggaaccaagtcccccaaaattggaagtatccccacagtctaaaggcaatgcactcaag
gtcatgtggaccaagcaggatgacggtggctcgcccatcacacactacctcatccggtac
aaagctaaaggggatttggaatggaaagatgagctccgtgtctcaagctcaagtggacac
gtgctcctcagcggccttgactggaacacggagtatgacgtgacggtggtggccgagaac
cagcagggcaagtcgaagcctggctcacttaacttccgcacatcctctgagccctccgcc
acaccagactacatggaagatggctcaggcctgagtacagggctgattgttgggatcctc
atcctggcgtgtgtggtcctgttgttagccgtcgacgccacctgctgctttgtcaacaag
tgcggcttgctaatgtgtctctgtggcaaacctgggaccagtccaaagagcaaagacgta
gagacaggaaaggctgcatttgtgaaggaggacaccaaagagactaggactgaggatggg
ctcacagccaatcatgatgtagggggacacgctgagccgaatgagacgacacccctaact
gagccagagcgacagccagaagtcacatctaccgtggtggacctccccctgtccttggcc
accaactcagacacaatcactgacacgtttgacttgagtcagtgcagccctgttagtgag
agcaccactctcacctccagcctcacagctcctccctctgaacccaaatctgcccctaaa
gcctgctcccagcccttagacacttcactgatctcatctgatcctcctttagtcgatctg
gctgattcccagaccattaatcaatcagctggtcagattaaatctgcagaacttgacacc
caggcttcaccttctcttgctcttagcacagagaaagaagccagagatctggaggcagag
ccaatgcttttagaaagtccatgtgagcccagaatgcttgtcactaatccacagaccaac
ggtgctcctccttcctcagaggaccttgtgctccagatagatggagatgcaccactgaca
catttcccacaggatgggttacactctctggctacagctgatccgtcggctccgcaaaat
gaaaaaatcctagaggatggagagattaaagctgaggaagacgagctgaagaaggtccag
ccagaagcactggcagaaccaaatgcgatatcgcaaacaaacgcctccgagactaaggca
tga
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