Tachysurus vachellii: 132858175
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Entry
132858175 CDS
T09596
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132858175 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132858175 (ndc1)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132858175 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
132858175
NCBI-ProteinID:
XP_060744393
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Position
15:23206521..23219019
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AA seq
666 aa
AA seq
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MFSFSQSCWFIRKVVRWRAVASIAWSVLLLPPITCVLIMFIRLNVFHPTNWLSGCLGLLT
EASTLFSMFLLCAAVILIAFFNLQYYTVIPSIPCSRVALLAEVLHPRQCVHSLVHCAVGM
LVMWCVCVMAGGRYHTLHTYHTHRESGDVVVYLNEYHVFMLLAGAFMGYSHSLLGVVQNI
HYVSFHIIQQYKYMRFKSSAWWLVKCSAVQSLYSVRNYIILYFLFGRIPRTWIANTLNVH
VDSSVRSLDSFGGLCDVSLFYQLWISGTFLLLTWYLSVLLFRIYITEPYSFLVQSSFSED
TEECLPKVLTEQNVLIMKFLALQDLALLSQHSPSRRQEVFSLSQPGGHPHNWNAISKECV
SLLSELTQRLIAHHDVVASNGRAKPSSERNDTRSSSSSCSVTSGTEDISDSPRRSVLIRT
PGSVFGSAVKGVSSPLTAPFTPDLTAPFSRPLLSPQVVHRPWLGSVQSPHVTRRNPKLWS
TSTESQSNGNQPPSPDPSPKAAGENKPSFLSQWLQNRKEQVKGFLAKRVLVVYLFNKLPE
ASSRALFADSQAHIWALEGLSHLVAASYSEDKYGVVQTTLPSILSSMLSLQEAVDRHFKL
PHASSKPGKTSNSLGDSTYKTLRFALRATLKTAIYRITTTFKEHLQSVSIPAEQQKRLQQ
FLEYKE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgttctccttcagtcagagttgctggtttatacggaaggtggtgagatggagagctgta
gccagtatagcctggtcagtgctacttctgcctcctatcacctgtgtgctcatcatgttc
atcagactcaatgtgtttcaccccacaaactggctctcaggatgtttgggtttgctgaca
gaggccagtacactgttctccatgttcctgctctgtgcagccgttatactcatcgccttc
tttaacctgcagtattacacggtcattccctccatcccttgttcccgtgtggctctgctg
gctgaagtgcttcaccctcgtcagtgtgttcactcactagtgcactgtgcagtcgggatg
ctggtgatgtggtgtgtgtgtgtcatggctggaggacgctatcacacactccacacgtat
cacactcaccgtgagagtggcgatgttgtcgtttacctgaacgagtatcacgtgttcatg
ctgctggccggagcgttcatgggatactctcacagtttactgggcgtcgtccaaaacatc
cactacgtctcctttcacattatacagcaatataagtacatgcgctttaaaagctctgcc
tggtggctggtgaagtgcagcgctgttcagtctttatattcagttaggaactacatcatc
ctctacttcctgtttggacgcatccccaggacgtggatcgccaacacactgaacgtgcat
gtggacagctctgtgcgctctctggactcgttcggaggactgtgtgacgtgtcgttgttc
tatcagctatggatcagtggaaccttcctgttgctcacctggtacctgagcgtgctgctc
ttcaggatctacatcactgagccgtacagtttcctggtgcagtcgtcgttctctgaggac
acagaagaatgtctccctaaagtcctgactgaacagaatgtcttgatcatgaagtttctg
gcgttgcaggatttggcgttgctttcccagcattccccttcacgcagacaggaagtcttc
agcctcagtcagccaggaggtcatcctcacaattggaacgctatcagtaaggagtgtgtg
tcgttgctgagtgaattaacacagcgtctcattgctcatcacgatgtcgtggcgtctaac
ggcagagcgaaaccttcatctgagagaaatgacaccagatcgagctcctcctcctgctcg
gtgacctcagggacggaggatatttccgactctcctcgccgcagcgttctgattcggact
cccggctcggtgtttggttctgcagtgaagggtgtgtcctcgcccctgaccgccccgttc
acgcctgatctgaccgcaccgttctccagacccctgctcagcccacaggtggtccacaga
ccctggttgggctcggtccagagtcctcacgtcacccggaggaaccccaaactgtggagc
acgtccaccgaatcgcagtccaatgggaaccaaccgccgtctcctgatccctcccccaaa
gcagcaggagaaaacaaacccagctttctgtctcagtggctccagaacaggaaggaacag
gtgaaaggtttcttggcaaagcgagtgctggttgtgtatttatttaataagctgcctgag
gcgtcgagtcgagccctgttcgctgatagccaggcgcacatctgggctctggaaggtttg
tctcatctggtagctgcttcatactctgaggataaatacggagtggtccagactacatta
cccagcatcctcagcagcatgctgtctctgcaggaggctgtggaccgtcactttaaactg
cctcatgcctcgagtaaaccagggaagacgtcgaacagtttgggcgactcgacgtataaa
actttgcgctttgctctgagagcgactctgaaaaccgccatctacagaatcaccaccacc
ttcaaagagcacttacagtctgtcagtattccagcagagcagcagaagagacttcagcag
ttcctggaatataaagagtag
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