KEGG   Tachysurus vachellii: 132858175
Entry
132858175         CDS       T09596                                 
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
tvc  Tachysurus vachellii
Pathway
tvc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132858175 (ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvc03019]
    132858175 (ndc1)
Messenger RNA biogenesis [BR:tvc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     132858175 (ndc1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 132858175
NCBI-ProteinID: XP_060744393
LinkDB
Position
15:23206521..23219019
AA seq 666 aa
MFSFSQSCWFIRKVVRWRAVASIAWSVLLLPPITCVLIMFIRLNVFHPTNWLSGCLGLLT
EASTLFSMFLLCAAVILIAFFNLQYYTVIPSIPCSRVALLAEVLHPRQCVHSLVHCAVGM
LVMWCVCVMAGGRYHTLHTYHTHRESGDVVVYLNEYHVFMLLAGAFMGYSHSLLGVVQNI
HYVSFHIIQQYKYMRFKSSAWWLVKCSAVQSLYSVRNYIILYFLFGRIPRTWIANTLNVH
VDSSVRSLDSFGGLCDVSLFYQLWISGTFLLLTWYLSVLLFRIYITEPYSFLVQSSFSED
TEECLPKVLTEQNVLIMKFLALQDLALLSQHSPSRRQEVFSLSQPGGHPHNWNAISKECV
SLLSELTQRLIAHHDVVASNGRAKPSSERNDTRSSSSSCSVTSGTEDISDSPRRSVLIRT
PGSVFGSAVKGVSSPLTAPFTPDLTAPFSRPLLSPQVVHRPWLGSVQSPHVTRRNPKLWS
TSTESQSNGNQPPSPDPSPKAAGENKPSFLSQWLQNRKEQVKGFLAKRVLVVYLFNKLPE
ASSRALFADSQAHIWALEGLSHLVAASYSEDKYGVVQTTLPSILSSMLSLQEAVDRHFKL
PHASSKPGKTSNSLGDSTYKTLRFALRATLKTAIYRITTTFKEHLQSVSIPAEQQKRLQQ
FLEYKE
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgttctccttcagtcagagttgctggtttatacggaaggtggtgagatggagagctgta
gccagtatagcctggtcagtgctacttctgcctcctatcacctgtgtgctcatcatgttc
atcagactcaatgtgtttcaccccacaaactggctctcaggatgtttgggtttgctgaca
gaggccagtacactgttctccatgttcctgctctgtgcagccgttatactcatcgccttc
tttaacctgcagtattacacggtcattccctccatcccttgttcccgtgtggctctgctg
gctgaagtgcttcaccctcgtcagtgtgttcactcactagtgcactgtgcagtcgggatg
ctggtgatgtggtgtgtgtgtgtcatggctggaggacgctatcacacactccacacgtat
cacactcaccgtgagagtggcgatgttgtcgtttacctgaacgagtatcacgtgttcatg
ctgctggccggagcgttcatgggatactctcacagtttactgggcgtcgtccaaaacatc
cactacgtctcctttcacattatacagcaatataagtacatgcgctttaaaagctctgcc
tggtggctggtgaagtgcagcgctgttcagtctttatattcagttaggaactacatcatc
ctctacttcctgtttggacgcatccccaggacgtggatcgccaacacactgaacgtgcat
gtggacagctctgtgcgctctctggactcgttcggaggactgtgtgacgtgtcgttgttc
tatcagctatggatcagtggaaccttcctgttgctcacctggtacctgagcgtgctgctc
ttcaggatctacatcactgagccgtacagtttcctggtgcagtcgtcgttctctgaggac
acagaagaatgtctccctaaagtcctgactgaacagaatgtcttgatcatgaagtttctg
gcgttgcaggatttggcgttgctttcccagcattccccttcacgcagacaggaagtcttc
agcctcagtcagccaggaggtcatcctcacaattggaacgctatcagtaaggagtgtgtg
tcgttgctgagtgaattaacacagcgtctcattgctcatcacgatgtcgtggcgtctaac
ggcagagcgaaaccttcatctgagagaaatgacaccagatcgagctcctcctcctgctcg
gtgacctcagggacggaggatatttccgactctcctcgccgcagcgttctgattcggact
cccggctcggtgtttggttctgcagtgaagggtgtgtcctcgcccctgaccgccccgttc
acgcctgatctgaccgcaccgttctccagacccctgctcagcccacaggtggtccacaga
ccctggttgggctcggtccagagtcctcacgtcacccggaggaaccccaaactgtggagc
acgtccaccgaatcgcagtccaatgggaaccaaccgccgtctcctgatccctcccccaaa
gcagcaggagaaaacaaacccagctttctgtctcagtggctccagaacaggaaggaacag
gtgaaaggtttcttggcaaagcgagtgctggttgtgtatttatttaataagctgcctgag
gcgtcgagtcgagccctgttcgctgatagccaggcgcacatctgggctctggaaggtttg
tctcatctggtagctgcttcatactctgaggataaatacggagtggtccagactacatta
cccagcatcctcagcagcatgctgtctctgcaggaggctgtggaccgtcactttaaactg
cctcatgcctcgagtaaaccagggaagacgtcgaacagtttgggcgactcgacgtataaa
actttgcgctttgctctgagagcgactctgaaaaccgccatctacagaatcaccaccacc
ttcaaagagcacttacagtctgtcagtattccagcagagcagcagaagagacttcagcag
ttcctggaatataaagagtag

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