Tachysurus vachellii: 132858206
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Entry
132858206 CDS
T09596
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
tvc
Tachysurus vachellii
Pathway
tvc03440
Homologous recombination
tvc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132858206 (brca2)
03460 Fanconi anemia pathway
132858206 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132858206 (brca2)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132858206 (brca2)
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132858206 (brca2)
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
132858206 (brca2)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
132858206 (brca2)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
132858206 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
132858206 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA2
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
132858206
NCBI-ProteinID:
XP_060744429
LinkDB
All DBs
Position
15:18273597..18295986
Genome browser
AA seq
2602 aa
AA seq
DB search
MFDDFFHRIETELGPLNSDWFEELTVRASEDGCGNSTAHKDKDKVIFRAPETPVLDSQMC
STPRIFRRRRPHSPAAGLEDTPNSGTGKMFPAPPGSESSPCLFDLAKDSQRFHKEWGSLK
TSACLDLLDTPTDLTTPASSAHRISESLGAQLNPDLSWSSSFNTPSLSPTVLLSKKTECQ
SSPVSFLRDKEVIIVRKLFPSLSKGSESTSGVRHNDINGGNVHADEHKSDSSSDNIEGVW
RQTVPDAIKDSNLRNTVESVLDGAEDVLSFFFKNSGSSLRRVKTTERKKRLNGVSKEVLE
TVEHTTDRPSASKTVTSASVANLKSPLFSSQLNNKDFTTWTPLSLSDVQYSKTNQACISE
ISSKLASPGVDDRTNRIAQLGRSSSRTSEQQTFTPDSTLEKSQGQVTLSEASPALSFSRK
PRKFVYPVQNSDSKKMHNVTDAAVGKHYQEASGHEEDVHTDTGDQSVQPAETTVKQVHPT
LLNIDHELDMSQLCKAFAEDFTQEVNSLKAPQKIAQSSHECVLIPACTMVEISDMQPKAV
ATLQCEGHVDRQTAEVVTFTNIQSFESTDCDGGCPTVRSGFSLETLPCNDTEHLYSGFKT
ANNAIIVVPPEALVKAKAALDESSERMTHTGTSGVTEPVQAGTNCCKSYKPVIANTAGEK
LPSESHQHGHEAGKETSNESVLRSEEASANIPSMFMCQTNESGFKTASNKSITVSSVNLE
KAKDIFKELDEEKLDSCLTDNKTQVCSIKAAKPYKSSQHSTGKDDGSSFLTASQRADVTE
LCSMLEDAGSQCEFTQFKRTKMDSKYPDSLQLEREWDPEILAGIDFDDSFNCDLTERQVL
KKHQSKADTHASVPNGLMNGDMAVQNLNIRKSCLISWEMQNKADDSVQEKAFCSGFRTAK
GNAVSISVKCLSKARSLFADIEDTEGNFSLESDSEADTVKQMENRPGDHQDTFCMESDLE
PKPRINTCNGNARSISEEAETCKQMCSKTNLETGQESVAQKPGLNQSSTVSYGFSTTGGK
DLKISENAHQNAKELLTELANGKESKYDIFPAETKATSWTSAQNSSDLLADVVAESKTSD
GSLPKGGKEHNFEISPDTKQATCPTPRSVESNGFKMANGKEASVSASAIQKSKTIFKDIN
DCMRSSDEAKSKETNTKLDLEGDTGQHTFVNGFKMASGKGVSFSEKAFMKAKTFFKNCDS
DCVDVSQVKRDDTSVMDDCGFKAVAGNMVNLPGTDNPNKETLKKDSTDLNKYVQRKFAKT
SSETLQPPSVCGFSTASGAAVSVSADALQRARAMLDDSNAASPGERRLEISEAGILSKNE
AVVAGKTYGFSTASGRKVAVSEKALQKAKSLFTDCDVDGLGPDPCNLSAAKTSAAGSEPT
HTLPSNAAGNKNGVSEKEPNRSKDVSVGSVDGSVERGSSSGEALCARNASVPVNAGKSEG
RYENMINGGPKAEHLGSGNCGFSTASGKGVCVSKSALAVAYEMFRDCDTQIVTNGKITND
SPSTAIDKKPIESETKATDPPHPSSPATQDNPSLLSCHSLNLDGCTVTQQKYFEQEAMAC
TKALLEDDLNESGLMSSLDTDVRQSPAQRQEIRLGVNAGTRKRPSDDEHLTGQPPLKRRL
VSEFDQISDDGTACAPMKSSPNGTLSDRRVFKYNLKPNITYPSRNVVDQASANQGHLKRR
PSDPKAPVFIPPFRKNLKEETPKTRVPTAVAQVPSVFVPPIKKKDTSGNVYVKDSPLISA
DSPAITSSSCESNMYHSARKTDKQKTEETKREDMLENDTTVLGETNVIWQQSLELARDIQ
NMRIRKKKHQRVRPLPGTFYLAKTSGVSRISLKEAVGYKCPDLHTEKQLYQHGVSFNVAQ
ITSENAESFRFNCDEFFRRDVLRDTGGIQLADGGWLIPDNKGMLGKEEFYRALCDTPGVD
PKLISEAWVYNHYRWVVWKRASMERAFPEILGGRCFTPEQVLLQLKLRYDVEVDHSQRSA
LKKIIERDDTPAKTIVLCVCGIAKDDQSLVRTKEATNTTDTKPESPAAVVWLTDGWYPIK
ALLDLPLSTMLRKGRLSVGVKLLIHGAELIGSQDACPPLEAPESLMLKISANSTRRARWD
TKLGFYKDPRPFPLLLSALYANGGVASRVDITVLRSYPIQWMEKKPGSVFVFRNERAEVR
EVAGYSRTKEKTLEHLFSKIQAQLEKEEEEKRKTRRGRTFSLHEIKNLQEGEEIHEAMES
DPALVEAHLSTQQVKAVSSYRQVLTERKRAELQDRVHKAVQEAEGGCANRDVTPVWKLSI
ADANDLHSSCVYTLNIWRPSLDLQSLLREGCRYKAYHLATSETKKRSGTSNIQFTATKKT
QFQDIEVCPQWLSLHFPARQSVKFGDLQSPGFRSTCGEVDLVGYIVSISDRQGTSPVLYL
VDEKFDFVSVRICSSLALLALEDLVKPLALLAVINLQLRQQSGPVPSLYAGEQALFSTNP
KEAYLQKDISRLKTFVEDYEHFFIVAEEKLSNLIPTGFLNSCESPRTPGLPSASKSNLRN
NASRVFSPFTPVTKRAPIPTGNSDTKDPRSVKRKRGMENLSRLQNPAPLLPLGMVRSPRI
SKTFNPPRRCETPRNPQTAPAP
NT seq
7809 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgacttcttccatcgaattgaaacggaactcgggccactaaattcagactgg
tttgaagagttgactgtgagagcttctgaagatggctgcggtaactccacagcacataag
gacaaggacaaggtcattttcagagctccagagacaccagtcttggacagtcagatgtgt
tcgacacccagaatatttaggcgcagacggccacattctcctgccgcaggtcttgaagat
actcccaattcagggacggggaaaatgtttcctgctccaccaggttcagaatcaagccca
tgtctatttgacttagctaaagacagccagcggtttcataaagaatggggatcactaaag
acaagtgcatgcttggatctactcgacacaccaacagatttaacaacaccagcctcatct
gcacatcgcatcagcgagagcctcggagctcaattaaaccccgatctgtcttggagcagt
tcctttaacacaccatcattgtcccccaccgttcttttatccaaaaaaacagagtgccag
tcttcaccagtaagttttctcagagacaaagaagtcattattgttcgaaagctgtttcca
tcactctcaaaaggttcggaatcaacatccggtgtgcggcacaacgacataaacggtggg
aacgtccatgcagatgaacataaatccgattcatcctccgacaacatagaaggtgtttgg
aggcagacggtaccggatgcgattaaggacagcaatttgcggaacacagtggagagcgtt
cttgacggagctgaggacgtgctgtccttcttcttcaagaacagcggctcctccctgcga
agggttaaaaccacggaaaggaaaaagagattaaacggtgtttctaaggaagtattagag
acagtagagcacactacagatcgtccatccgcatcaaagacagttaccagcgcttctgtt
gcaaatttaaagtcccctttattttcaagtcagcttaataataaggattttacaacttgg
accccgctaagtttatctgatgttcaatactccaagacaaaccaagcatgtatctctgaa
atctcaagtaaactcgctagtcctggagtggatgatcgtacaaaccgtatcgcacagctt
ggacggtcgtcttcgcgcacgtccgagcaacagacgttcactcctgattcgactcttgag
aagtctcaggggcaagttactttatcggaggcatctcctgcactttccttctcaagaaaa
cccaggaagtttgtgtatccagtgcaaaattcagatagtaaaaaaatgcacaatgtcact
gatgctgcggttggaaaacactaccaggaagcttccggtcatgaagaggatgtccacaca
gacaccggagatcagtcggtccagccagcagaaactactgttaagcaggtccatcctaca
cttcttaacatagaccatgagctcgatatgtctcagctttgcaaagcgtttgcggaggat
ttcactcaggaagtgaactcgttaaaagcgccacaaaaaattgcacagagcagccatgaa
tgtgttttaatcccagcttgcactatggtagaaataagtgatatgcagcctaaagcagta
gctacgctacagtgtgaaggtcatgtagaccgtcagacagcagaagtcgttactttcaca
aatatacaatcttttgagagcacagactgcgacggtggctgtcctacagttcgttctggt
tttagcctggaaacgttaccatgcaacgacaccgaacatctttattctggttttaaaaca
gcaaataatgcgattattgtagtaccacctgaagctttagtgaaagccaaagcagcatta
gacgaatcctcagagcgcatgactcacacaggcacttcaggcgtaaccgagccagtacaa
gcaggtacaaactgctgcaaatcttacaaacctgtaatagcaaacactgctggagagaaa
ttgccttcggaaagccatcagcatggacatgaagctggaaaagaaacttctaatgaaagt
gttttaaggtctgaggaagcttcagcgaatattcctagcatgttcatgtgccaaacaaac
gaatctggctttaaaactgcgtctaacaaaagtataactgtctcatctgtgaatctcgag
aaagctaaagacattttcaaggagttggatgaagagaagttagattcatgtctgacggat
aacaagacgcaggtctgcagtataaaagctgccaagccgtataaatcttcacaacattcc
accggcaaagatgatggaagttcgtttttgacggcttcgcaaagggcggatgtgaccgag
ctgtgtagtatgttagaggacgcaggcagccagtgtgagtttacacagtttaaacgcaca
aagatggactcaaaatatccagatagcctgcagctggagcgagagtgggaccctgagata
cttgctggtattgactttgatgatagctttaactgtgatttaactgagaggcaggtctta
aaaaaacatcagtccaaggcagatacgcatgcttcggtcccaaacggtctgatgaacgga
gacatggccgttcaaaatttaaatatcaggaagtcttgtcttatttcatgggaaatgcag
aataaggctgatgacagtgtgcaggaaaaggctttttgttctggctttagaaccgcaaag
ggaaatgctgtgagcatctctgtgaaatgtctgagcaaggccagaagcctttttgcagat
atagaggacacggaaggaaactttagtctcgagagtgacagcgaagcagataccgttaaa
caaatggaaaatcgaccaggtgaccaccaggacacgttttgcatggaatccgatctcgaa
ccaaaaccaaggataaatacgtgtaacggaaatgcgaggtcaataagcgaagaggctgaa
acgtgtaaacagatgtgtagcaaaacaaatctggaaacaggacaagaaagtgtagcacag
aaaccaggtttaaatcagagcagcacggtaagttatggatttagtactactggaggaaag
gatttaaagatctcagaaaacgctcatcaaaatgcaaaggaacttctaactgaacttgca
aatggcaaagaatccaagtatgacattttccctgcagaaacaaaagccacctcttggact
tcagcacagaattcttctgatttattggcagacgtagttgcggaatcaaagacgtctgat
ggatctttaccaaaaggtggaaaagaacacaattttgaaatcagccctgacacaaaacag
gcaacgtgtccaactcctcgatccgtcgagagtaatgggtttaaaatggccaacggcaaa
gaagcgtctgtctcagcaagtgcaattcaaaaatcaaaaaccattttcaaagatattaat
gactgcatgagaagctcagatgaagcgaaatccaaggaaacgaatacaaagctggatctc
gaaggagatacaggccagcacacgtttgtcaacggattcaagatggcaagtgggaaagga
gtgagcttttctgaaaaagcgtttatgaaagccaagacgttttttaaaaattgcgattcc
gattgtgtggatgtttctcaagtaaaaagagacgacacaagtgtgatggatgactgtggc
tttaaggcagttgcgggaaacatggtgaatttgcctggaacagacaatccgaacaaagag
accttaaagaaagactccacggatttaaataaatatgtccaaaggaaattcgctaaaacc
tcctctgagactcttcaaccaccatctgtctgtggtttcagtacagcaagcggtgctgcg
gtgtccgtttcagccgacgcacttcagagagctagagctatgttggatgattcaaatgct
gcttcacctggtgaaaggagattggaaatatcagaagcagggatcctttccaaaaacgag
gccgtggttgcgggaaaaacctacggctttagcacagcaagcggaaggaaagtcgccgtt
tctgagaaagccctccagaaagcaaagagtctttttactgactgtgatgtggatggatta
ggacctgatccctgtaatttgtcagctgcaaagacatcagcagcaggttctgaacctaca
cacacattgccttccaatgccgccggtaacaaaaacggcgtgtcagaaaaggagccgaac
aggagtaaggacgtgtccgtcggtagcgtcgacggttcagtcgaacgtggaagttctagt
ggtgaagctttgtgtgctaggaatgcaagtgtgccagttaatgctggaaaatctgaagga
cgatatgagaacatgattaatggaggcccaaaggctgagcacttgggatcaggaaattgt
ggctttagcacagccagcggaaaaggtgtttgcgtgtcaaaatcggccctcgcagtagcg
tacgagatgttcagagattgtgatacccaaatagttactaatggtaaaattaccaatgac
tctccatctacagctattgacaagaaacctatcgagtcagagaccaaagccactgatcca
cctcacccgtcatcaccggccactcaggataatccttccctgctgagctgccattcttta
aatcttgatggatgcactgtaacccagcaaaaatattttgagcaagaagcaatggcttgc
accaaagcgctcttagaggatgatctcaatgagagtggtttgatgagtagcttggacact
gacgttaggcaaagtcctgctcaacgtcaggagatacgcttaggggtgaacgcaggaaca
cgaaagcggccgtcggatgacgagcatttgacaggccaacctcctttgaaaagaagactt
gtttcagagtttgaccagatctcagacgacggaacagcctgcgctccaatgaaaagcagc
cccaatgggactctgagtgaccgaagagtcttcaaatacaacctgaaacccaatatcact
tatccgtccaggaatgttgtggaccaagcatcagccaaccaaggtcacctcaaaaggaga
ccctcagaccccaaggctccagtgtttataccaccttttcgaaaaaaccttaaggaggaa
acgccaaaaacccgtgttcccacagctgtggctcaagttcccagtgtgtttgttccaccc
attaaaaagaaagatacgtcaggtaacgtttatgtgaaggattcaccactgatttctgcc
gattccccagccatcacaagctctagttgtgaaagcaacatgtatcattcagccagaaaa
acagacaaacagaaaacagaagaaaccaagagagaggacatgctggaaaatgatacaact
gtccttggtgaaacaaacgtaatttggcagcagtccttggagttagcacgagatattcag
aacatgagaatcagaaaaaagaagcatcagagagttcgacctctacctgggactttttac
ctggctaagacgtccggggtgagcagaatttccctgaaagaggctgtaggatacaagtgt
cctgacctccacacagaaaaacagctctatcagcatggtgtatccttcaacgtggcccag
ataaccagcgagaacgcagagtcgttccgattcaactgtgatgagtttttcagacgtgac
gttctccgagacaccggagggattcagctggctgacggtgggtggctgattccagacaac
aagggaatgctgggtaaagaggagttctacagagccttgtgtgatactcctggtgttgac
cccaaactgataagtgaagcatgggtgtataaccactatcggtgggttgtgtggaaacgc
gcctccatggaaagagccttcccagaaattctgggtggtcggtgtttcactccagagcag
gtgctcctacagctcaaactcaggtatgacgttgaggtggaccacagtcaaagatcagcc
ctgaagaagattatagagagagacgacacaccagccaagaccatagtgctttgtgtgtgt
ggtattgccaaagatgaccaaagtttagtcaggacaaaggaggccacgaacacaacagat
acaaaacccgagtcacccgctgcagtcgtatggcttaccgacggctggtatcccatcaaa
gcgctgctggacttgcctttgtctaccatgctgcgaaaaggccgtctcagcgtgggtgtg
aaacttctgatccacggcgcagaattaatcggctctcaagacgcctgtcctcctctagag
gctcctgaatcactcatgctcaagatttcggcaaacagtacaagacgagcacgctgggac
acaaagctcggcttctataaagaccctcgacccttcccgctgttgctttcagcgctgtat
gctaacggaggagtggcgagtcgtgtggacatcaccgtgttaaggagttacccaatacag
tggatggaaaagaagcccggttctgtctttgtgtttcgcaacgagcgagctgaagtcaga
gaagtagcaggatacagcaggaccaaagagaagacattggagcacctgttctccaaaata
caagctcagcttgagaaagaggaagaagaaaagaggaaaaccaggagaggcagaacattt
agtctgcacgagatcaagaacctgcaggaaggggaagagattcatgaagcgatggagagc
gatccagctttggtggaggcccatctaagcacccagcaggtgaaagctgtgagtagctac
aggcaagttttaactgaaaggaagagagcggagttacaggaccgggtgcacaaggctgta
caggaggctgaggggggctgcgctaaccgagacgttactcctgtctggaaactgtctatt
gctgatgctaatgatttacacagcagctgcgtatacacactgaatatctggaggccttct
ttggacttgcaatccttactgagagaaggctgcagatacaaagcttatcatctggccaca
tcagagaccaagaaacgctctggcacttccaacatccagtttacagctaccaaaaaaacc
cagtttcaagacattgaggtttgcccacaatggctaagtttacattttcctgcaagacaa
tcagtgaaattcggagatcttcagagccctggattcagatccacgtgtggagaggttgac
cttgtgggctacatcgtttctatctcagacagacaaggtacttctcctgtgttgtactta
gtggatgaaaagtttgactttgtttctgtgaggatctgtagcagcctggctcttcttgct
ctggaggacctggtaaaaccattagctctactggctgtaatcaacctgcagctccgacag
cagtctggcccggtccccagcctttatgctggagaacaagctctattctctacaaaccct
aaagaagcctacttacagaaagatatttctcgtctgaagacgtttgttgaggattatgag
catttcttcatagttgctgaagagaagctctcgaacctgattccaacaggtttcctgaac
tcttgtgagtccccaagaactccaggtttaccctcagcgtcaaaatcaaacctcaggaat
aatgcaagccgagttttctcccctttcactcctgtgaccaaaagagcccctatacccacc
ggaaactcagacactaaggaccccaggagtgtgaaaaggaagcgtggtatggagaacctt
tcacgccttcaaaacccagcacccctccttcctctgggaatggtccgctctcccagaatc
agcaagacttttaaccctcccagaaggtgcgagactcctcgtaatccacagacagcacca
gctccataa
DBGET
integrated database retrieval system
