Tachysurus vachellii: 132858228
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Entry
132858228 CDS
T09596
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvc03032
]
132858228 (pif1)
03029 Mitochondrial biogenesis [BR:
tvc03029
]
132858228 (pif1)
Enzymes [BR:
tvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132858228 (pif1)
DNA replication proteins [BR:
tvc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
132858228 (pif1)
Mitochondrial biogenesis [BR:
tvc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
132858228 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
DEAD
Mg_chelatase
RsgA_GTPase
AAA_5
AAA_7
AAA_16
ABC_tran
PhoH
AAA
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
132858228
NCBI-ProteinID:
XP_060744490
LinkDB
All DBs
Position
1:1884473..1893282
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AA seq
643 aa
AA seq
DB search
MLHVEDGARLDCTVAVERVSGASAGHVVQRRVLRRATVTLGRDEFRELVLRVQDVRGGPH
ESFALRSEFRLFTRFVKDGKCTVNFSQNNTQLLISDCPPDRLKTFLKNLSIKHEASRGSN
PVSERARMRAGVPRSFEIISPVQQKDIQKANELRRKVNTPVQVKVLTERAVNKTVNRQQV
KRPRPDGDTSPVKALHPHKKPVLTLPVAQKLSKEQMAVLNAVLSGKNVFFTGSAGTGKSF
LLKRIVGSLPPKSTYATASTGVAACHIGGTTLHSFAGVGSGSAPLEQCLELAQRPGVLQH
WTSCKHLIIDEISMVEAEFFDKLESIARSIRRSSEPFGGIQLIVCGDFLQLPPVTKGKEK
PSFCFQARSWRKCIHVNMELTEVRRQTDRTFISLLQAIRLGRVTEEVTARLLKSASNPIE
RDGILATRLCTHKDDVELTNENKLQQLPGPLRVFEALDSDPMLVKTIDAQSPVGHKLQLK
VGAQVMLTKNLDVQRGLVNGARGVVVDFLPGNQGLPRVRFLCGAVEPMKRERWTFKAAGG
LYLSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDF
DPRVVQANSDVLMFYKKLKRDRLLLQSSMNDFVGKSNKENEAW
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttgcacgtggaggacggtgcgagactggactgcactgttgcagtggagcgtgtgagt
ggagcatcagcaggtcatgtggtacagcgccgggttcttcgccgtgccacggtcactctg
ggacgagacgagttcagggagctggtgctgcgcgttcaggatgtccgtggtggaccccat
gaaagcttcgctttacgtagtgagttccggctcttcacgcggtttgtcaaagacggcaag
tgtacggtgaacttctctcaaaacaacacgcagcttctgatctctgactgtccacctgac
cgcttgaaaaccttcctgaagaacctgagtataaagcacgaagcctcacgtggcagtaac
cctgtcagcgaaagggcccggatgcgggcaggtgtcccgaggagcttcgagatcatcagc
cctgtgcagcaaaaagacatccagaaagccaacgagttaaggagaaaagtgaacaccccg
gtgcaggtgaaagtgctgaccgagagagcggtgaacaaaactgtcaatcgacagcaggtc
aaaagaccccgaccggacggagacaccagcccggttaaagctcttcaccctcacaagaag
ccggtcctgacgttgccagttgcgcagaaactcagcaaagaacagatggcagttctgaat
gcagtgctgagtgggaagaacgtgtttttcactggaagtgcaggtacggggaagtccttc
ctgttgaagaggattgtaggatcgcttcctcccaaaagcacgtatgctacagcgagcacc
ggtgtagctgcctgtcatataggagggacgacgttacacagtttcgcaggtgtcggctcg
ggttcagctcctctggagcagtgtctggagctcgcgcagcgacccggggtcctgcagcac
tggacaagctgcaaacacctcatcatcgacgagatctccatggtggaggccgagttcttc
gacaagctcgagtctatcgccagatcaattagaagatcctctgagcctttcggaggaatt
cagctgatcgtatgtggagattttctccagcttcctcctgtcactaaaggaaaagagaaa
cccagcttctgcttccaggcgaggagctggaggaagtgcatccacgtgaacatggagctg
acggaggtgcgcaggcagacggaccgaaccttcatctcgctactgcaggccatccgactg
ggaagagtcaccgaggaagtcactgcccggctcctgaagagcgccagcaaccccatcgag
cgggacgggatcctagcgaccaggctgtgcacgcacaaggacgatgtggagctcactaac
gagaacaaactccagcagctgccaggacccttacgtgtgttcgaggcattggacagcgac
ccgatgctcgttaaaaccattgatgcacaaagtccagtgggtcacaagttacagctgaaa
gtgggagctcaggttatgctgactaaaaacctggatgtccagagagggctggtgaacgga
gcgagaggcgtcgtggtcgacttcctaccaggaaatcaaggcctcccgagagtgcgcttc
ctgtgcggtgctgtagaaccgatgaagcgcgagcgctggacgtttaaggcggcaggaggc
ttgtacctcagccgacagcagctcccgttaaagctagcctgggccatctccatccacaag
agtcaaggcatgactctggactgcgtggagatctctctggctcgtgtgtttgagagtggt
caggcttacgtagctctgtctcgagcccgcagtctggaaggtcttcgtgtcatggacttt
gacccccgagtggtccaggcgaactcggacgttctgatgttctacaagaagctgaagcga
gaccgactcctcctgcagtcctccatgaacgactttgttgggaaaagcaacaaggagaat
gaagcttggtga
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integrated database retrieval system
