Tachysurus vachellii: 132858391
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Entry
132858391 CDS
T09596
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132858391 (npas1)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
132858391 (npas1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
132858391
NCBI-ProteinID:
XP_060744692
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All DBs
Position
15:14636238..14673679
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AA seq
767 aa
AA seq
DB search
MAAMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRHFASQGDPPWSPLLEGDNNCNKVRRNSHSLA
TDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIKPHLRTEAGCQTTQESASSSASTSSLAGTPEPAPSSPLSSGDEPAERGFF
VRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSSRSLHRPLGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQITYCENRISEYMDLSPAEVVGHTCYHFIYVEDVDIIRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWVQSCGTVSINHKAPHERNVIWVNYILSRTEMPDTPL
DLIQLPESLKAERLRASSSTREISPKAHGPNGAHTTKGGAGRNESERKGRDSYTHTTSNQ
SENRRKRPHHSSPENTPPQTRRQLEVFRHREDSLSGSSDSASDSEAEEEEEEDKEEEWEH
NGNSKRVKTEVVASKKNSEMGKVRNGRAVIQQLKSVVTSTANSSIKSEQELLNVGICSAT
GGRWSNTQSTRGINGSSPPSQDSESVTTESPAKGLFSPPSPISASPLPREDRSLHGGRTP
DYELLQRLAAGGAAGRVLFHPLALGPPGPQSLYAPSTIRYAPPELPTSHADGPRLDIAPK
SPTFFPHLQRIAALPPFSGFSPSENPFAPSLPFCMNGLRGAAGTDED
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatgccgttcgtcagtgagggaaagtgtgttagtgtggagtgggatttcctg
caaggactcctcgccaagccgcccaccctaccctgtttacaaaacctgcggaaagagaag
tcccgcaatgcagctcgctctcgtcgtggtaaagaaaactttgagttttttgagctggcc
aaaatgctgccacttcccggtgccatcaccagccagctggacaaggcttcggttatccga
ctgaccatcagctacctgcacatgaggcattttgccagtcagggagacccgccctggagc
cccctgctggagggggacaataactgcaacaaggtgcgaagaaacagtcactcactggcc
actgatatatttgagcagcacctgggagcacatctattacagtctctggatgggtttgtg
ttcgtggtcagtcaagaaggacgtttcctctacatttctgagaccgtgtcaatttacttg
ggtctctcacaggtggaattaacaggcagcagtgttttcgactacatccatcctgcagac
catgtggagatggcagagcggttgggaattaagccacacctccgcacagaggcaggctgt
cagactacccaggaaagtgcttcaagttccgcctccacatcctcattggctggcacacct
gaaccagccccctccagtcctctgtcatccggagatgaaccagcagagcgaggtttcttt
gtccggatgaaatccactcttactaagcgcggcctacatgtcaaatcctctggttataag
gtgatccatgttactggacggattcgctgtcggccagcactggttccaggctcttcacgc
tcactccatcggccattgggattggtggctcttgcacacaccctcccaccgtccactctt
aatgaggtgcgcatggagagtcagatgtttgtttttcgggtcaacatggacctccagatc
acctactgtgagaacaggatctcagaatatatggacttgagcccagctgaggtggtggga
cacacctgctaccacttcatctatgtagaagacgtagatatcatccgacaaagccatgaa
gacctgctgaggaagggtcaggttgtgactggttactaccgctggctgcagaggagaggc
gggtatttgtgggttcagtcatgtggcactgtgtccatcaaccacaaagcaccccatgaa
cgcaacgtcatctgggtcaactacatactcagtcggacagagatgcccgacacgccactg
gatttaatacaacttccagaaagcctgaaagccgagcgtcttcgggcaagctcttccact
cgagagatctctccaaaggcacatggcccgaatggtgcccacacgaccaaggggggagct
ggacgaaatgagtctgagcgcaaagggagagactcttatactcacactacttctaaccag
tcagaaaacaggaggaagaggcctcaccactccagccctgaaaatacacctccacaaact
agaagacaactcgaggtgttccgccatagagaggatagcctgtcaggctcctcagactca
gccagtgacagtgaagctgaagaagaggaagaggaggacaaggaagaggagtgggagcac
aacggcaacagcaagagagtaaagactgaagtggtagcttctaagaagaacagcgagatg
gggaaagtccgtaacggtcgtgctgtaatccagcagctgaagagcgtcgtgaccagcact
gccaactctagcattaaatctgagcaggaactgttgaatgttggaatttgctcagccact
ggagggcgttggagcaacactcagtccactaggggtataaatggcagcagccccccatcc
caagattccgagtcagtcaccacagaatctccagctaagggtctcttcagccctccatca
cccatctcagcttcacccctgcctagggaagatcgttccctccacggaggccgtacaccc
gattacgagcttcttcagagactagctgcaggtggagcagccgggcgtgtactgttccac
cctcttgctctcgggcctccagggcctcagagcctttacgctccgagcaccatccgctac
gcccctccagagctgcccaccagccatgctgatggaccacgcctggacatcgcacccaaa
tcacctactttctttccacacctgcagagaatcgccgctctaccacccttcagcggcttc
tctccttcagagaatccattcgctccatctcttcccttctgcatgaacggactgagagga
gcagcagggacagatgaagactga
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