Tachysurus vachellii: 132858398
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Entry
132858398 CDS
T09596
Symbol
dscaml1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132858398 (dscaml1)
Cell adhesion molecules [BR:
tvc04515
]
Immunoglobulin superfamily
DSCAM family
132858398 (dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Ig_5
Pur_ac_phosph_N
Ig_6
V-set_CD47
Interfer-bind
Sp38
fn3_2
Receptor_2B4
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
132858398
NCBI-ProteinID:
XP_060744702
LinkDB
All DBs
Position
15:complement(87130..175073)
Genome browser
AA seq
2074 aa
AA seq
DB search
MWLITLLLLYSFKEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENQAGKIRSPSIRVK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVAIVPGNRFFLTSFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVLDPTESTPSVMDSFQSGEVQVG
RSVELPCIASGFPNPTIRWLKDGRPLPADSRWTRRLTGLTISDLRMEDSGNYICEVTNSF
GSKEVTGYLNVIEPLRVTVSPKNLKTGISSTVILSCAVQGSPHFSVSWFRNTEPVHPDQH
FSIQGTNNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVSSFSERVVA
PGEPFSLMCAAKGAPPPTITWTLDDEPIARDSAHRASQYTLSDGSTVSHVNVSNPQIRDG
GVYRCAARNSAGSAEYQARINVRGPPSIRAMRNITAVAGRNTFINCRVIGYPYYSIKWYK
DGMLLPDNHRQVVYENGTLKLSDVQKGMDEGAYLCSVLIQPQLSISQTVYVTVKVPPLIQ
PFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVSGTSGVTIETKEFMSSLQISKV
SLKHNGNYTCIASNDAATVSSERQLIVTVPPRFRVQPNNQDGIYGKSGVLNCSVDGYPPP
KVMWKHAKGIGNPQQYHPVPLTGRIQIMPNGSLLIRHVLEEDRGYYLCQASNGVGSDISK
SMLLTVKIPAMITSHPNTTMAIKGQNKELNCTARGEYPIIIRWERGDTVIDPDRNPRYSI
TTSPNEKSDEVISTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVRE
VKDRSMNLRWTQRFDGNSLITSYDIEYKNKSDPWELKHATRKISPTNNQANIVELHPASV
YSIRMYSYNKIGRSQASKELTISTEEASPDGPPMDVILQPMTSQSIRVTWKAPKKELQNG
VIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPS
SSEINATTLEDVPSQPPQNVRAITVTSDEAVITWSEPPRMTLNGVLKGYRVVFWSLFPDG
EWGEMQNITTVREQVELKGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDYPGPPAGI
KAVPSSASSVVVSWLPPNKPNGIIRKYTIYCSSPGSAQPAPSEYEANPEVLFYRITHLNQ
GQQYLIWAAAVTTAGRGNISEKVTVEPALKAPAKILSFGGTVTTPWMKEVRLPCSSVGEP
APTIKWTKDSENTAIPVSQDGQRNILGNGTLLLRSVKAEDSGYYTCTATNTLGFDTIIVN
LLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWRDVFISSTE
RSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPLFTHINSTHAR
LNLQGWSSGGCPINAVLLDFRPKGTYAWQSVRTNSTTDVFLAELREATWYELKMKACNSA
GCGNQTSQFATLDYDGSTIPPIKSARGEGDDVKKLFSIGCPVILVTLGMALLFIIRKKRK
EKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGE
DKATIPVTDTEFSQSVNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSA
HSTRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNS
MVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNENADSMTS
MSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEYCNLPLYMKTEPFFRKQAEM
HDPCPVVPPREASIRSLAARAYHTQGRHMTLDPSKQALTLSHGGLSSLTSSGASGPASST
TTGGSSISSGTSTLPQRTLTMPSSSSTSSAGQSTGAAGAAAGAVATSGSTGGGGMSSSSK
VGGSRDSLLESSSSGLGRLQKQSAGAYSKSYTLV
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgataacattactcctgctgtattcttttaaagaagtgaacagtgaggatgtg
gtctcgacacggctgtactttgtgaacgcctccctgcagagagtgaccttctctagctca
gtgggggtgtccctgccctgcccagcaggtggcgccccccatgcagtcctccgctggtac
ctggctaccggcgacgacatctacgacgtgccccacatccgccatgtccatgccaatggc
acgctgcagctctaccccttctctccatctgccttcaacagcttcatccatgacaatgac
tacttctgcactgcagagaatcaggctggcaagattcgcagccctagcatccgtgtcaaa
gcagtgttcagggagccatacacggttcgcgtggctgatcaacggtccatgcgtggcaac
gtggctgtcttcaagtgcctcattccttcagctgtgcaggagtatgtcagtgtggtctcc
tgggaaaaggacaccgttgccattgttccaggtaacaggttcttcttgacatcatttggg
gccctgtacatatcagacgtgcagaaggaggacgcgctctctacttaccgctgcattacc
aaacacaaatacagtggagagacccgacagagcaacggtgctcgtctctctgtgttggat
cctactgagtccacaccctctgtgatggacagcttccagtcaggtgaagtgcaggtgggt
cgcagcgtggagctcccatgcatcgcctcaggcttccccaatcccaccatccgttggctg
aaggatggtaggccacttccggctgactcccgctggaccaggcgtctcacaggtcttact
atcagtgacctacgcatggaggattcgggcaactacatctgtgaggtcaccaatagcttt
ggctccaaggaggtcacaggatacctcaatgtgatagagccactaagggtcactgtctcc
cctaaaaacttaaagacaggtatcagcagtacagtgatcctgtcctgtgctgttcaaggt
tctcctcatttcagtgtgtcctggttccggaacacagagcctgtacatcctgaccaacac
ttctccattcagggcaccaacaatgagactctgtttatcagtgcggcccagaaaagacac
tcaggcgcgtaccagtgctttgcaactcgcaagggtcaaactgcccaggacttctccatt
atattgctggaagatggtacaccaaggatcgtctcatccttcagtgaacgtgtggtggca
ccaggtgaacccttctccctaatgtgtgcagccaaaggtgcccctccacccaccatcacc
tggaccctggatgatgagccaatcgctcgggactcggcgcaccgggccagtcagtacacg
ctctcggacggctcgactgtatcgcatgttaacgtcagcaacccacagatccgcgatggg
ggcgtgtaccgctgcgctgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggccccccaagtatcagggccatgcgcaacattacagccgtggctgggcgc
aacaccttcatcaattgccgtgtgatcggctacccatactactccatcaagtggtacaaa
gatggcatgctgttgccagacaaccaccggcaggtggtatatgagaatggtacactcaag
ctcagtgatgtgcagaaaggaatggatgagggagcgtacctgtgcagtgtgctcatccaa
ccccagctctctatcagccagactgtctatgtcactgtcaaagtcccccctctcattcag
ccttttgacttcccccctacttcaattggtaaactgatgtacatagcatgtgtagtttca
tctggggacatgcccatccggattacatggcgcaaagatggtcaggagattgtgtctggc
acctctggtgtcaccattgagaccaaggagttcatgagctcactgcagatctccaaagtt
tcccttaagcacaatggcaactacacttgcatcgccagcaatgatgcagccaccgtcagc
tctgaaaggcagcttatagtcactgtccctcctcgttttcgagttcagcccaacaaccag
gatgggatctatggcaaatctggggttctgaattgctctgtggatggttatccccctccc
aaagtcatgtggaaacatgctaaaggtattggaaacccacagcagtaccatccagtacct
ttgactggccgcatccagatcatgccaaatggttctcttctgatccgccatgttttggag
gaggatcgtggctactatttatgccaggccagcaatggtgtgggctcagatatcagcaag
agtatgttgctgacagtcaaaattccagctatgatcacctcccatcctaacacaactatg
gcgataaaaggacagaataaagaactaaactgcactgccaggggtgaatacccaattatc
attcgctgggaacgtggggacactgtcatcgaccctgaccgtaaccctcgctactcaatc
accactagccccaatgagaagagtgatgaggtgatttccacactgaagctaaagccagct
gagcgtggggactctgtgttcttctcatgtcatgctatcaactcctatggcgaaggccgt
ggcctcattcagttgactgtgcaagagccccctgatcctccagagttagaagtacgtgaa
gtaaaagatcgcagtatgaacttaagatggacccagaggtttgatggcaacagcctcatt
accagttatgatattgaatacaaaaacaaatctgatccatgggaactgaagcatgctaca
cgcaaaatttccccaactaataaccaggcaaacatagtagagctgcatcctgcttctgtc
tacagcattcgtatgtactcatacaacaaaattggccgtagtcaggccagcaaagagctg
acgatcagcacagaggaagcctctcctgatgggccacccatggatgtcattctgcagcct
atgacatcacaaagcatccgtgttacatggaaggctcccaagaaggagctccagaacggt
gttatccgtggttatcagattggctacagagaaaatgggcctggcagcaatggccagtac
agcatagtggagatgaaggcaactggtgacagtgaggtgtatacgttggataacctgaag
aaatttgcccagtatggagtggttgttcaggcctttaatcgagctggaacaggtccatcc
agttctgagatcaatgctaccacactagaagacgtgcccagccagcctcctcagaatgtg
cgggccatcacagtgacatcagatgaggcagtgattacatggtctgagcctccacggatg
accctaaacggggtcctaaaaggatatcgtgtggtgttctggtcccttttccctgatgga
gaatggggtgaaatgcagaacatcactacagtacgtgagcaagtggagttaaaaggctta
gaaaagttcacaaactacagtgtccaggtgttggcctacacacaggcaggagacggcgtc
cgcagcaatgtactctatatacagacacgagaggactaccctggccctccagcaggcatc
aaagctgtcccctcctctgccagcagtgttgtggtatcctggctccctccgaacaagcca
aatggcatcatcaggaaatacaccatttactgctctagccctggatcagcccaaccagct
cccagtgaatatgaggcaaacccagaagtgctattttaccgcatcacccacctgaatcaa
ggacagcagtaccttatctgggcagcagctgttaccactgctggtcggggaaacatcagc
gagaaggtcactgtggagcctgcattaaaggctcctgctaagatactgtcttttggaggt
acagttaccactccctggatgaaagaggtacggctgccatgtagttcagttggggagcca
gctcccacaattaaatggaccaaagacagcgagaacactgctattcccgtctctcaggat
ggccagcggaacattctgggaaatggaactctgttgttgcgctctgtaaaagcagaggat
tccggatactatacctgcacagccaccaatacactaggatttgataccataattgtgaac
cttttagtgcaagtccctccagatcagccacgtttaacagtctccaccacctcaacctcc
tctattactctggcttggatccctggagacaatggaggaagctccatcagaggctttgtg
ctgcagtactctgtggataatacagaagagtggagagatgtgtttattagctccactgag
cgctctttcaagctggataacctccgctgtggcacttggtataaggtcaagctagctgct
aagaacagtgtgggagctggtaggataagtgaaatcattgaggcaaagactcatggcaga
gagccacagttcaacaaggaccagcccctgttcactcacatcaactcaacccatgctcgg
ctcaatctccagggctggagcagtggcggctgcccaattaatgctgtgctgcttgacttt
cggcccaaaggcacctatgcctggcaaagcgtacgcaccaacagcacaactgatgtcttc
ctggctgagttgcgtgaagccacctggtacgagctgaagatgaaggcttgcaacagtgct
ggctgtggaaaccagacctcccagtttgccacactagactatgatggcagtaccattccc
ccaatcaagtccgcacgtggggaaggtgatgatgtaaagaagctgttctccattggctgt
cctgtcatcctagttacactgggcatggccctcctcttcatcattcgaaagaaacgcaag
gagaaaagactaaagagacttcgagatgctaagagtttggctgaaatgttgatcagtaag
aacaaccgcagttttgacaccccagtgaagggcccaccccaggggccacggctgcacata
gatatacctcgtgtacaactgcttattgaagataaggagggcatcaaacagattggtgaa
gacaaagccaccataccagtgacagatacggagttcagccaatcagtaaacccccagagc
ttctgcacaggcgtgtctgtacaccatcctgccctcattcagaacactggccccttaatt
gacatgtctgatattagaccaggaaccaatccagtgtcaaggaagagtgttaagtcagct
catagtacaaggaaccgttactcaagccaatggaccctgacaaagtgccaggcatctacg
cctgcccgcaccctgacctccgattggcgtactgtcggctcccagcatggtatcactgta
acagaaagtgacagttacagtgccagtctgtcgcaggacacagacaagggccgtaacagc
atggtttcaacagagagtgcttcctctacatatgaggaactggctcgtgcttacgagcat
gccaagctggaagagcacctgcagcatgcaaagtttgagatcacggagtgcttcatttca
gacagttcttcggaccagatgaccacaggtactaatgaaaatgctgacagcatgacatca
atgagcacgccctccgagccaggcatctgccgattcacagcatctccaccaaaaccacag
gactatgaccgtggcaagaatgtagcggtgccaattccacaccgtgccaacaagagtgag
tactgtaatctccccctgtatatgaagacagagccattcttccgcaaacaagctgagatg
catgacccatgtccagtggtgccaccacgtgaagcttctattcgaagtttggcagctcgt
gcctaccacacacagggccgccacatgacattagacccatccaaacaggccctgacactc
agccatggtggcttaagcagcctaaccagctcaggagcatctgggccagcctccagtacc
accactggtggctccagcatcagctcgggcacatccacactgccccagaggactcttacc
atgcccagctcctcctccacctcctcagctggccaaagcactggagctgctggggctgca
gctggagctgtggcgacttctggctccacaggaggaggtggcatgagcagcagctccaag
gttggtggttcaagagactctctgctggagagcagctcatctggattgggcagactgcag
aagcagagtgctggggcatattcaaagtcctacacactggtgtag
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integrated database retrieval system
