Tachysurus vachellii: 132858647
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Entry
132858647 CDS
T09596
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132858647 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132858647 (apex1)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
132858647 (apex1)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
132858647 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
132858647
NCBI-ProteinID:
XP_060745004
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All DBs
Position
16:complement(8271598..8275586)
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AA seq
310 aa
AA seq
DB search
MSKRAKKNEASAEPGNNGTEPPTKKGKKAKEPEAPVLYEDPPDKLTSKDGRAANTKITSW
NVDGLRAWVKKKGLDWVRQEAPDVLCLQETKCAEKALPADITSMPEYPYKYWAGSEEKEG
YSGVAMLCKTEPLKITYGIGKEEHDKEGRVITAEFPSYFLVTAYVPNAGRGLVRLDYRKT
WDVDFREYLSNLDRRKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFSQLLAAG
FIDSFREVYPEQTNAYTFWTYMMNARSKNVGWRLDYFVLSTALLPSLCDSKIRNTAMGSD
HCPITLHLAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagagcgaagaaaaacgaggcgtctgcagaaccaggcaacaacggaacagaa
ccaccaacaaagaaagggaagaaggcgaaggaacccgaagccccagtgttgtatgaagac
cccccagataaactgaccagcaaggatggccgggcagccaacacgaagataacctcttgg
aacgtagatggcctgcgtgcctgggttaagaagaaagggcttgattgggtgcgtcaggag
gctccagatgtgctttgtcttcaggagactaagtgtgctgagaaagctttaccagcggac
atcacctctatgcctgagtatccatataagtactgggcaggatcagaagagaaagagggt
tacagtggcgtggccatgctgtgcaagaccgagcctcttaaaatcacttatggcattggt
aaagaggagcatgacaaagagggccgtgtgatcactgcagagttcccttcctacttcctg
gttactgcatacgtgcccaatgctggccgtggcctggttcgcctcgactatcgcaaaact
tgggatgtagacttccgtgaatacctgagcaacctggacagacgtaagcccttggtgctg
tgtggtgacctcaatgtggcccaccaggagattgacctgaaaaaccccaaaggcaaccgt
aagaatgcaggctttactcccgaagagcgggagggtttcagccagctcctggctgctggc
tttatcgatagtttccgtgaggtatatccggagcagaccaacgcctacaccttctggacg
tacatgatgaatgcacggtccaagaacgtgggctggcgcttggactacttcgtgctctct
actgctttgctcccaagcttgtgtgacagcaaaattcgtaacacagccatggggagtgac
cactgccccattacccttcatttggctgtataa
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