Tachysurus vachellii: 132858655
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Entry
132858655 CDS
T09596
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
tvc
Tachysurus vachellii
Pathway
tvc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132858655 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132858655 (taf3)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132858655 (taf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_UBR7-like
PHD_2
PHD_5
Motif
Other DBs
NCBI-GeneID:
132858655
NCBI-ProteinID:
XP_060745022
LinkDB
All DBs
Position
16:9587031..9642954
Genome browser
AA seq
874 aa
AA seq
DB search
MCESYARSLMRVAVAQLCQALGWDAVQLSACELLSDVLERYLQQLARCCHRYSELYGRTD
PGLSDIEQAFGLMGVSVSELEDYINNLEPVGFFHSIPQFPISKSSVLQFPTSSFDTDVRN
ALRGDKRDYIPEYLPPLAPLHQDEEEEEQVPADMGTSAEAMQVSLGEEEEGDAEENDENW
LGSRGSDSPRPEGLLPAAKRPRMGTKSGSSPEWSFEPREPLSSLNAQHMACSPSPPLPLE
MVCPPALTPTPGQKPKVSSLSPARQKNKSPKRVIGSTPSAISARPSSVTPPKSAQKAGKR
SPGRPRSPRSPRPGLTQLGHGFLAPITNDVLQDGELKDEAIEDSIAAVIARACAGGVGVD
DPFAYDSDSESEGLPKSPPKHMPKHTLVQPKLMPFLSVKHPTMIPQTSLLAGPNRWTLDD
SIDEVIRKANQGQAVPCQSPPEPSYFSTPSESPPTPPPPILNPPQERKDPVASSLLKKKL
KKDIKTKLKKKDRERLKEKGKDKNKNKEKNKEKKKEKERGQGEDGKTFWTELSLGAEERR
DGGVGKKEKDKHKDKKKDKEKSKKDKEKRDKFKERGGKEERRLSLAAKESTSASLPLFSP
SSCLRVPSIIPPLQPILHEALFHPKETKSKEKDKKKEKKEKKKKKDKEKERDKDRERERP
REKEEKKKEKEKKEKVKEKEKPKVEKASLMVEAPVVPQSPVIPRLKLRVGAGQDKIVISK
VTPDLEPTPPTPRTPVSRSGPGARMRSPPAPLLAVPPPVAPAPLPPPVLVPPTPPPVFQA
PASQAKARGCSVVTETVSAYVILDEWGNKIWICPGCNKPDDGSPMIGCDECDDWYHWPCV
GIVTAPPEDQPWYCVKCSGKKKDKKTKKRKRKAH
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagagctacgcgcgctcgctgatgcgggtggcggtggcgcagctctgccaggct
ctcggctgggacgcggtgcagctctccgcctgtgagctgctctctgacgtgctggagcgc
tatttacagcagctagcacggtgttgccatcgttactccgagctctatgggcggacagac
cctggtctgagtgacattgagcaggcctttggtctgatgggagtgagtgtatcagagctg
gaagactacatcaacaacctggagccggtggggttcttccactccatcccccagttcccc
atcagcaagagcagtgtgctgcagttccccacctccagctttgacacagatgtacgcaac
gccctgcgcggagacaagagggactacatcccagaatacctcccacccctcgccccgcta
caccaagatgaagaggaggaggagcaggtccctgcagacatgggcacatcagctgaggcc
atgcaggtgtcactcggcgaggaagaagagggagatgccgaagagaacgacgagaactgg
ctcggctcacgtggatcagatagccccagacccgaaggtcttttacccgctgccaagcgc
ccacgcatgggaaccaaatcgggaagcagcccggaatggagctttgagcctcgcgaacct
cttagttcactcaacgcccagcacatggcatgctccccttcacctccactgcccctcgaa
atggtctgtccccctgcattgaccccaacgccagggcaaaaacccaaagtctcctccctt
tctcctgctcgacagaaaaataaatcacccaaaagagtgattggctccaccccttctgcc
atatctgctcgtccttcttcagtgaccccacccaaaagtgcacagaaggcagggaaaagg
tcacccggaagacccagaagcccccgaagccctaggccagggctcacacagttaggacat
ggatttctggctccgatcacaaatgatgttttgcaggacggcgagctcaaagacgaggcc
atcgaggactccattgcagcggttatagccagagcgtgtgcgggtggagtgggcgtggat
gacccattcgcatatgactcagactcagaaagcgaagggcttccaaagagcccacccaaa
catatgcccaaacacacacttgtgcaaccgaaactcatgcctttcctcagtgttaaacac
ccaaccatgattcctcaaacatcgctcttggccggtccaaaccgctggaccttggatgac
tccatagatgaggtcatccgaaaggccaaccagggacaagctgtgccttgtcagtcacca
ccagagccctcctacttctccaccccatccgagtctccgcccaccccacctccaccaatc
ctcaaccccccacaggagcgaaaagatccggtggcttcatctctcctaaagaaaaaactc
aaaaaggatatcaagaccaaactgaaaaagaaggaccgagagcgactaaaggagaaaggg
aaagacaagaacaagaacaaagagaaaaacaaggagaaaaagaaagagaaggaacgaggg
cagggggaggatggaaagactttctggacagaattatcgcttggagcagaggagaggagg
gatggtggtgttgggaagaaggagaaggacaagcacaaggacaagaagaaagataaagag
aagagcaagaaggataaagagaaaagagacaagttcaaagagagaggagggaaggaggag
aggagactatcacttgcagccaaggaaagcacctctgcctcactacctctcttcagccct
tcttcttgccttcgtgtaccctcaataattccacccctgcagcccatcctccatgaagca
ctgttccaccccaaagagaccaagagcaaggaaaaagacaagaagaaagaaaaaaaggag
aagaagaagaagaaagacaaagagaaggaacgagacaaggacagagagagagagcggccc
agagagaaggaggagaaaaagaaggagaaagagaaaaaagaaaaagtgaaagaaaaggag
aagccgaaagtggagaaggccagtttaatggttgaagcccctgtggttccgcagtctcct
gtcatacccagactaaagctaagagttggagccggacaggacaaaatcgtcatcagtaag
gtaactcctgatttggaacctaccccaccaacgcctcggactccggtgtcgcgctctggt
cctggtgctcggatgcgttctcctcctgcccctcttctcgcagtgccacctcctgttgcc
cctgcacctctcccaccccctgtgttggtgccacctactccgcctccggtgtttcaggcc
ccagccagccaggctaaagctcgcggctgcagcgtcgtcacagagacggtcagcgcttac
gtgattcttgacgagtggggtaataagatctggatctgccctggctgtaataaacctgat
gacggcagtcccatgatcggctgtgatgagtgcgatgactggtatcactggccctgcgta
ggaatcgtaaccgctcccccggaggatcagccctggtactgtgtgaagtgttctggcaag
aaaaaagacaaaaaaacgaaaaagaggaaacgtaaagcgcactga
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