Tachysurus vachellii: 132858766
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Entry
132858766 CDS
T09596
Symbol
cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tvc03037
]
132858766 (cfap54)
Cilium and associated proteins [BR:
tvc03037
]
Motile cilia and associated proteins
Sperm associated proteins
132858766 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
TPR_2
TPR_1
TPR_10
Motif
Other DBs
NCBI-GeneID:
132858766
NCBI-ProteinID:
XP_060745208
LinkDB
All DBs
Position
16:complement(14343404..14372130)
Genome browser
AA seq
3006 aa
AA seq
DB search
MAARLTYRLSVYLCIATAHARLYSNIKKLLPSSLRRCLRSLKLFEIWKKYEPRLPKPYYE
EHLLDTADFLFETKFYRLALWQGYTRYLHRFSPASLDNIKDLEQFKQAFFSKGFYTAEAK
LTLRALYGECLCAYYLERERCRQRDCIGMQKLLNILAFLRIMMQAILPHESLSWLLYNGS
LYIYKICRFLMSISHSAQALEYLLWACVCLETSIPLLTPSFLSWRATLYCSVCECYYTGQ
AAVQAEMFARRALVKIDELGKLEKLSGFPSSPETMRAFKEATIKVAVMVFKRSVYESRRK
PKGYFRLKQKSNLRDGHNNPWPRTTTERILMELFDGNAAQFLAVLEALWDSSRRPLQTGF
PDDPDIQEVAIELMSAGISILSGNGGSFIRAGSDSLPLSLNALTPTYTLMEMAIAGKNQI
SVDAAVKFVKLLFRYEQWDVFCSLSNNLVTVLSSLEGRLFRKAELELTLLEAVEHLISSQ
RVSLGTKDVMAEIQTDKDQSSVPISMTDELLNLVQTLHVCVCEAAQDIRPDEDLVLDILL
YLWAKCKLVFQRAQARHNDPVGYIAKMAFPDKWVQTLFLLCEVAYMCQLADIDPVAVAEM
TLRLASVLEGSADSPSLTISTKYTTNGSSLSSTPVDKPTATPSINSQVEHLEMVWTVLQK
GLECVSRGRTVCLPCGVSAISDTAYLQMFSEHLRSSRDGQIERTSSSFTRSLLMDMHLEL
LAFQHRISLKLLDIYPDDENPEGRKRPLMQSTQGQCTAVLSKRARTECAMQAKIKKNKIS
RVLFLVQKALLSYKKDATNRGTKQLLEEALALLEKAGVEEKRLLSDATSAEMGLGVGEGC
RPPPPPVLVSRSNQALTFTPAPYVQEEQVCWYRIYGKEVGGVNLKVRIGDCHLTGTGEMI
PSRGERLFCISGLESNQKYIFALAAYDSQGNLIGGSIGDTTRPVLAYLPLPLLTAWAHLA
QVAYQTGQYALAKKACSDIWSHFTLPSAADSGACQKPVDENAPERLAQTKLCAETLQLSS
PILQQLFLTSIFMQTDINIQERALYCDSVSEGSPLIWEQEDRLAECEKMLVAIDLSLHLN
DSSAALQAVVSCYGLLAPLIFYQIPSDPVIQVLLKCLMVLQEIPGALKQKRPVVTTESLY
HMVACITHYVAKGLQASKEECMASSVMEQGKQLLMEMSESLPQNDSVQKPQKKTVAEQED
EPSEELKALTCIALKLQEKTRALNRKREAADSIDHDLSGEEDPKILYNVIGSNSLKNAFK
NVMKFKQTSGFMEFAAVLLEKAMQEDQLELLIQWGQEIFKWIKSRDESLMLPKKPYEKLG
KDQKKLMISIIQFCNKKNRVYKKKKAVSSSEDYEKVFKAVEIMMKHLGSVRSHQQQRMMM
QMHLDELPWRCRANLTLAQAHFGLLRKYLQLNPLQHCYSKLSLRCFSLANLGTLVKWKNI
SQQTEPPELSPSVLKPTIYKAKDISQGVAINSESGSGESEVESEIYNPCFELFSESESSE
TTESSMQCLMFKQLDIVSKASLHLRRAMVLAYRGRLWTSLQWVCEILWDQFSTIAFLVEC
SQSSENPSTLTLAHLYTVFTPLLALASEMLMDMMEKLEQWKVYDEEGEELETRPLNNGVL
IDLKWMKSLVLHTLELLFYQNKWETLAHLALLYNFYSREHYTHVITPVLVYAQRRLLERI
SYFGGPSVPQPHFTYTEMVTGKKVTCRNYAVKQLLLCSSVESCLESTSNSTASEPLELAE
RRRAMCVVSVPLDIDDTLHCFRESQAKRCHTLRAFEHSRTLFMLLLANSQHPIEVPFCKE
PCHGSQDKVEFNIAVSTAPSIGPPDLSYEDYNSVDSVYSSPLSPSYIQTVLSSYNSSIKY
LQANNYNSLQVQTLHDLGNLYFYNGNPKAAHTHWSKALDCSLQTTNVLESWDGDSWSHNS
TQQPMRHAGIWGCLQGALLSAKIAQYIFTSNISQRTNCCLLSAKLFKCLLRASQPHPDND
LEYSSYTLNMELIPGVKVFSDSDQTLIGNTVASLGFVCDWLYTTGHHLSALPLLVLYEYV
ASKVCRHPHLTAGCRILKVKMLTELHLFAEAVKEIHHLSDGEEVPQPHSSFTKSVNISTW
KQFSNYKPLTDPCNLEVLEELVNKRLIEDIMALYGTKLTCQLHLARLQLILAICSTIHYL
PEPLSDILEEKVRSSGFSSLSKSSSDQFPSSPNMKSVEPKGLQLQLQKDTLTPGQVKTLL
LKETFNQLNSELYALQHIHTDPEELNLAVEIRLLLSSLTLQQGKAALSADQAASALRLLQ
DSSLLQSDSIQQLAPRQPSSVLNQSSTRAEHEKLYEPEADTGPQLGDMPATVEALERMGR
SLWLRCTVAVVQSLSAHIPGTVIYAGVDSSVEADRLIKQGLADAEAWGDPDTQVLLLLQG
VTLNTHCGRAPEESTAMLQEAVCLLSGRSTLSLQSGLSLAKATLRLSELRGSDGQPLYLL
NQKLLLQQLMSLGECFVKTAEGRLKLLSTPAWKNIYHPQLPLLARTTMRLGQCLALQAMV
RSSEEDKQYMNLWLLAQEKLHSAFIISQAMASRDPQLEADILHLKGLVGRSLMSLGILRH
QPVVETFLESITLAHSHTHSLQLIHMCYMEMALIYLQQWQNTPTDLAEPPTPLEPTESDK
CSDCITVAQSHLLLFWVCLRAAAKTVEVLTNHGQLCGITTETEGPLPLRSLKALADFVSN
DLLSPCGGMQEPTVVQPSSDPDIDNGLKVKKCSEINWEHLIRYYTHLLNLRHISRQPMAK
QCVEEFMSPAADSNLTLKLTQLHTFFSDHLANYKEQCVIPDPPSVLILEPQTIQQTMSDL
YPWATLNTHQLCIQWHRPTLASNGLSPKTIMLVFGLNKAPSDTQPNIPAAADIEAGYRLI
STDSLKALHAQLISLCVETEVDVSVSGSSTSLTTSVSCIQESEHDSETSVKASTISQQTM
LVKKTMHVCTEIRNLLMPDLKTNPITKVPFEPSVQILCDLERCFNPASGATLEDRALCDW
LFSLLI
NT seq
9021 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggttgacgtaccgcctcagcgtatacctgtgcatcgccaccgcgcatgct
cgtctctatagcaacattaagaaacttttgccttccagtttacgccgatgtttacgatct
ttgaaactttttgaaatctggaagaaatatgaacctcgtctcccaaagccttattatgag
gagcatctgctggatactgcagattttcttttcgagacgaaattttacagattggctctg
tggcaaggatacacacgctacttacaccggttctcccctgctagcttggacaacatcaaa
gatctggagcagttcaagcaggccttcttctcaaaaggcttttatactgcagaagcaaag
cttacgctccgtgctttgtatggggaatgcttgtgtgcttattacttggaacgtgagagg
tgcaggcagcgagattgcattgggatgcagaaactgctcaacattcttgcatttttgcgc
atcatgatgcaggccatcctgccccatgagagcctgagctggttgttgtacaatggttct
ttgtacatttacaaaatctgtaggttcctgatgtccataagtcactctgcacaggctctg
gagtatttactgtgggcatgtgtgtgtctggagacatccatcccactgctaactcctagt
ttcctgtcctggagagcaacactttactgtagtgtttgtgaatgttactatactggccag
gctgctgtgcaagcagagatgtttgctagacgagctcttgttaaaatagatgagctaggg
aagctggaaaagttgagtggattcccatcctcaccagagacaatgcgagcctttaaagaa
gccaccatcaaggttgctgtcatggtgtttaaacgctcagtgtatgaatctcggaggaaa
cctaaaggatatttcaggttaaaacagaagagcaatctcagggatggtcataacaatcca
tggccacgtacaacaaccgagcgcatcctgatggagctgtttgacggaaatgctgctcag
ttcctggcagtgttggaggctctgtgggacagttcccgcagacctctgcagactggcttc
ccagatgatcctgatatacaggaggtggcaatcgagctcatgtcagctggcatcagcata
ctgtctggaaatggtggctccttcattcgagctggaagtgatagcctgccgttgtctttg
aatgccctcactcctacttacacccttatggagatggcaatagctgggaaaaatcaaatt
tcagtggacgctgcagtgaagtttgtgaagttgctgtttagatatgagcagtgggatgtg
ttctgcagcctttcaaacaaccttgtgaccgtactgtctagcttggagggccgtctcttc
cggaaggctgaattggagcttactctgttggaggctgtggagcatctcatttcctcgcag
agggtctcgctggggaccaaagacgtcatggctgagattcaaactgataaagaccaatct
tcagtgccaattagcatgacagatgagctactaaatctggtccagactctgcatgtatgc
gtgtgtgaagcagcccaggacatcagaccggatgaggatctggtgctggatattttattg
tatctctgggcgaaatgtaagcttgtgtttcagagagctcaggccagacacaatgaccct
gtaggctacatagccaaaatggcctttccagacaagtgggtccagactctgttccttctg
tgtgaggtggcctatatgtgccagctggctgatatagacccagtggcagtggctgagatg
acattaagactagcctcagtgctggagggcagtgcagactcgccttcactgaccatctca
acaaaatacacaactaacggcagcagtttgagttccacccctgtggataaacctacagcc
acacctagtattaactcacaagtagaacatcttgagatggtgtggactgtgctacagaaa
ggcctggagtgtgtatcaagaggcaggactgtatgtctcccttgtggtgtttctgccatc
tctgacactgcatacctacagatgtttagtgaacatttgagatcgtctagggatggacag
attgagagaactagcagttcattcacaagatctctcttaatggatatgcatttggaactg
ttggcttttcagcacaggatatctctcaaactcctagatatctacccagatgatgagaat
cctgaggggagaaagaggccacttatgcagagtacacaaggacagtgtactgctgtactt
tcaaagagggccagaacagaatgtgcaatgcaagcaaagattaagaagaataaaatctcc
agagttttgtttctggtgcagaaggccttactttcctacaagaaagatgctactaacaga
ggaaccaaacagctgcttgaggaggctttggcattactggagaaagcaggagttgaggag
aagcggctgcttagtgatgctacctctgcagagatgggattaggagtgggagaagggtgt
agacctcctccacctcctgtgctggtatcacgtagcaaccaagctttaactttcacacca
gcaccatatgtgcaggaggagcaggtttgctggtaccgaatttatggtaaagaagttgga
ggtgtcaacctgaaagtgaggattggagactgccacctgactggcactggtgaaatgatt
ccgtctagaggagaacgcttgttttgcataagcggcctggagtccaaccagaagtatatt
tttgctttggcagcctacgattctcagggcaacctgatcggaggtagtattggagatacc
acccggccagtgctagcctacctccccctgcctctgctgacagcctgggcacatctggct
caggtggcgtaccaaacaggacagtatgcactagccaagaaagcctgcagtgacatttgg
agccactttactcttccatcggctgcagattctggagcctgtcagaaaccagtggatgag
aatgctcctgagaggcttgcccagacaaaattgtgtgcagagacattgcagctctcctct
cctatactacagcagcttttcctcacctcaatctttatgcaaactgatatcaacatccag
gagagagcactatactgtgattccgtcagtgaaggaagccctttgatctgggaacaggag
gatagacttgcagagtgtgagaagatgcttgtggccatagatctgtctcttcatctcaat
gacagcagtgctgcattacaggcagtagtgagctgctatggcctcctggcacctcttatc
ttctatcagatcccatcagaccctgtgatccaggtgctgttgaagtgtctgatggtgctg
caggagattccaggcgcacttaagcaaaaaaggcctgtagttactaccgaatcactgtat
catatggtggcctgcattacacattatgtagccaagggtttgcaagcttcaaaagaggaa
tgcatggcatcttcagtgatggaacaaggcaagcagctcttaatggagatgagtgagagt
ctaccacagaatgacagtgttcagaaaccccaaaagaagacagtggctgaacaggaggat
gaacctagtgaggagctgaaggctttgacatgtattgctttgaagctgcaagaaaaaacc
agagcactgaacaggaagagagaagcagcagacagtattgatcatgacctcagtggagaa
gaggatcccaaaattctgtacaacgtgattggttccaactccctaaagaatgccttcaaa
aatgtaatgaagtttaaacagacgtctggcttcatggagtttgcggcagttcttctggag
aaagctatgcaggaggatcagctggaactgctaatccagtggggccaagaaatcttcaag
tggattaagagccgagatgaaagtttgatgttgccaaagaagccttatgagaaattgggg
aaagatcagaagaagttaatgatatccatcatccagttctgtaataaaaaaaacagagtt
tataaaaagaagaaagcagtatccagctcagaagattatgagaaagtgtttaaggcagtg
gagataatgatgaaacatttgggttccgtgagaagccaccaacagcagaggatgatgatg
cagatgcacttggatgagttgccatggcgatgccgtgccaaccttaccctggctcaagca
cactttggtctgctaagaaagtacctacaactaaaccctctccagcactgttacagcaag
ttgtctctgcgctgcttctccttggcaaatttgggaacactagtgaaatggaaaaatatt
tctcaacaaaccgagcctcctgagttgagcccttcagtcctcaaacccaccatttacaaa
gccaaggatatcagtcagggagtagcaatcaacagtgaatcggggtctggggaaagtgaa
gtggagagtgagatttacaatccatgctttgaactgttcagtgaatcagaaagcagtgaa
acaactgaaagttctatgcaatgccttatgttcaagcaactggacatagtctccaaggcc
tcactacacctcaggagagctatggttttagcctatcgtggaagactttggacatcttta
cagtgggtgtgtgaaatcctgtgggaccagttcagcaccattgcatttctggtggagtgt
agccagagctctgaaaatcccagcacactaacactggctcacttatacacagtgttcaca
cccctgctggctctcgcctcagagatgctcatggacatgatggaaaaattagagcaatgg
aaggtgtatgatgaggaaggagaagagctggagaccaggcctctgaataatggagtactg
atagatttgaagtggatgaagagtttggtgttgcacacactggaactcctcttctaccag
aacaaatgggaaactcttgctcatcttgccttgttatacaacttttattcaagggaacac
tacacccatgtcataaccccagtactggtatatgcccagagaagactgctggaaagaata
agctactttggaggcccttcagtccctcagccacacttcacctacacagagatggtcact
ggaaaaaaggtgacctgtaggaactatgcagtcaagcaactgctcttatgttctagtgta
gagagttgtcttgagagtacttcaaatagtactgcctcagaacctctggagttggcagaa
agaagacgagccatgtgcgtagtctctgtaccactggacattgatgacacattgcactgc
ttcagagagtcccaggccaagagatgtcacacacttcgtgccttcgaacacagccgcaca
ctgtttatgcttctgctagctaactcacagcacccaatagaggtgccattctgtaaggag
ccctgtcatggctcacaggacaaagtggagtttaacatagcagtcagcactgctccatct
atcggtcctccagatctgtcctatgaagactacaactctgtggattctgtgtacagctca
cctctatctccctcgtacatccagactgtcctgtcctcctataacagctctatcaaatac
cttcaggcaaataattataactcactgcaagttcaaactctgcatgacctggggaaccta
tatttctacaatggaaatccaaaggctgctcacacacattggagcaaggctctggactgt
tccctgcagaccacaaatgttctagaatcctgggatggtgattcttggagccataactct
actcaacagcccatgaggcatgctgggatatggggttgtctccagggtgcattgttgtct
gctaagattgctcagtatatctttacatctaatataagccaacggacaaattgctgcctt
ctctctgctaagctctttaagtgtctgttgagggcatcccagcctcatcctgataatgat
ctggaatactcgtcctacacactgaatatggagctcatacctggggtgaaggtcttctca
gactcagaccaaactctgatcggaaacactgtggctagcctgggctttgtgtgtgactgg
ctctacaccacaggacatcacctctcagcacttcctcttctggttctctacgaatatgta
gccagtaaagtgtgtcggcacccacatctcactgcaggatgcagaatactgaaggtaaaa
atgttgactgagctgcacctttttgctgaggcagtgaaagagatacaccatctcagtgat
ggagaggaagtcccccagcctcacagtagcttcactaaatcagtgaacatttcgacatgg
aagcagttcagtaattataaacctctcacagatccttgtaatcttgaggttctggaggag
cttgtgaacaagagacttattgaagacatcatggctttgtatggcaccaaactaacctgc
caactccatctggccagacttcaactcatcttggccatatgtagtacaattcattaccta
cctgagccactgtcagacattttggaggaaaaggtgaggagctcaggtttttccagcctg
agcaaatccagcagtgaccagtttcccagcagccccaacatgaagagtgtagaacccaaa
ggcctgcagcttcagctccaaaaagacacacttactccaggacaagtcaagacgctgtta
ctgaaagagacctttaaccagctaaactctgagctgtatgctcttcagcacatccataca
gaccctgaggagctgaatctggctgtggagatcagactgctgctgtccagtctcaccctg
cagcaaggcaaagctgccttaagtgcggatcaggcagcgtcagctctcagattactgcag
gactcttcattgctccagagtgacagtatccaacaactggcaccaagacagccatcttct
gtgcttaatcagtccagtactagagctgagcatgagaagctgtatgagcctgaggcagat
acaggacctcagctaggggacatgcctgctacagtggaagctttagagcgtatgggtcgc
tcattatggctccgctgcacagtggctgtggtccagagcctctctgctcacatccctggc
actgtcatctatgcaggtgtggacagcagtgtggaggcagacaggttgataaaacaaggc
ctagctgatgctgaggcctggggagacccagacacacaggtcctgctactcctacagggg
gtcacgttgaacacacactgtggtagggcaccagaggagagcaccgccatgctgcaggag
gcagtatgtctgctgtctggccgcagtaccctttctctgcagtctggtctgtcccttgct
aaggccactcttcggctgagtgagctgaggggttcagatggtcaaccgctttacttgctc
aatcagaaactcctgctgcagcagctgatgtcactgggcgagtgttttgtgaagacggca
gagggaagattgaagctgctctccactccagcatggaagaacatttaccacccacagctc
cctctactggcccggacaaccatgcgcttgggccagtgtttggccctgcaggcaatggtg
agatcttcagaagaggataaacaatacatgaatctgtggttattggctcaggagaagctc
cattctgcattcatcatctcacaagccatggctagcagagacccccagctggaggctgat
atcctacatcttaaaggacttgtggggaggagcctgatgtcactgggcatactcagacac
cagccagtggtggaaacctttctggagagcatcacattggctcattctcacacccacagt
ctgcagttgatccacatgtgctatatggagatggctctaatatacctgcagcagtggcag
aatacccccactgaccttgcagaacctccaacacctttggaacctactgaatctgacaag
tgctcagactgcattactgtggcgcagagtcacttacttcttttctgggtttgtctgaga
gctgctgcaaagacagtggaagtgctcacaaaccatgggcagttgtgtggcatcactaca
gagacagaaggtccacttcctcttagatctctcaaagctcttgctgattttgtctccaat
gatctactcagtccttgtggtgggatgcaggagcccacggtagttcagcccagttctgat
ccagacatagacaatgggctgaaagtcaagaaatgttctgagatcaactgggagcatctc
atccgctactatacacacctactcaatctgaggcacatctccagacaaccaatggcaaag
cagtgtgtagaggagtttatgtctccagctgctgattcaaatttaactctcaaactcact
cagttacacaccttcttcagtgatcacttagcaaattacaaagagcagtgtgttatacct
gatcctccatctgtcctcatactggagcctcagactatacagcagacgatgtcagacctg
tatccatgggccacactgaacacacaccagctctgcattcagtggcatcgacccacgctc
gcaagcaatggactatcacccaaaacgataatgctggtctttggactaaataaagcacca
tctgacacacagcccaacatcccggctgctgctgacatagaggctggatacagacttatc
tctacagacagtttgaaagctctacatgctcagctgatctcgttgtgtgtggagactgag
gtggatgtgagtgtgtcaggctcttcaaccagcttgaccacctctgtcagctgcatacag
gagagtgaacatgacagcgagacgtctgttaaagccagcaccatctcacagcaaacgatg
ctggtaaagaaaaccatgcatgtgtgtactgagataagaaatctgctgatgcctgattta
aaaacaaatcccatcacaaaggtaccctttgagccaagtgttcagatcttgtgtgacctg
gaacgctgctttaaccctgcctcaggagccactttggaggacagagcactatgtgactgg
ctcttttctcttctcatctga
DBGET
integrated database retrieval system
