Tachysurus vachellii: 132858861
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Entry
132858861 CDS
T09596
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase PUS7L
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvc03016
]
132858861 (pus7l)
Enzymes [BR:
tvc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
132858861 (pus7l)
Transfer RNA biogenesis [BR:
tvc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
132858861 (pus7l)
Prokaryotic type
132858861 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
132858861
NCBI-ProteinID:
XP_060745378
LinkDB
All DBs
Position
16:1398267..1401731
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AA seq
650 aa
AA seq
DB search
MDGGGTPSPCCRSAHEGFHGTIKNSTQDFVVTEIDVHGQLVNSPEALEEPVKIKNDAEVR
DCPHTDKILTEETPPDVDLSGGEALSQDSFDLSVILSCSVSKNLEQFASEVQGCHEVQKN
LEMSLGAFPDKPQRAVVHSAVKYNYPFLMTVTNRDEILVREDPDFRELSHLVSVQEAEDF
FRYKDAKVPGSTFSFLPDDIKEHRTSVHHFVSRKFGKLMETKSFVTHGGTAITVRLRERG
GPARKRTAADREEKDIYTGFTLRKENLETLEAISYMAAVLGVLPSDFSYAGIKDKRAITY
QSMVVKKISPERLLEKAYMFERKGIQVSKVYLVSEPLRLGRLAGNRFDLVVRDLKPHKSS
SVDLESLVKEAVENVKTRGFVNYYGPQRFGTCQKVQADQVGLALLKEDTNTALRLFLSPE
EGDDLENKAKQHFHQTGNAKESLALMPPHKARERMMLRALHRYGSGPEGSSNAWLSLPHG
MRVFYLHAYCSRVWNEAACFRLRTLGVRPVQGDLVLAVAEAAEEETHASQVHVVTGAEEQ
NCVFSLDQVVLPMPGNSVKYPENTVGSWYKERLGQDGLGSCRFRIPSLKLNVPGCYRPLL
SYPRNVSYSLHPEEDTQDTGPCRTKLVLSFNLNASCYATVCLREIMKCDP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggatggaggagggacaccatcaccgtgctgcaggtctgctcatgaaggctttcatggc
accatcaagaactccacccaggactttgtagtgactgagatagatgttcatgggcaactt
gtgaacagcccagaagctctcgaggaacctgtgaagatcaagaatgatgctgaggttaga
gattgtcctcacacagacaaaatcctgacagaggaaacacctcctgatgttgacttgagt
ggtggtgaagctttgagtcaggactcttttgacctgagtgtaattctgagctgctcggta
agtaagaacttggagcagttcgccagcgaggtccagggttgtcatgaggtgcagaagaac
ttagaaatgtcccttggagcctttccagacaaaccacagcgagccgttgtgcacagcgca
gtaaagtacaattacccttttctcatgacggtcaccaaccgtgacgagatcctggtcaga
gaggacccagacttcagagaactctcacatctagtatccgtgcaagaagcggaggatttc
ttcaggtataaagatgccaaagttcctggctccacattcagcttcttgcctgatgacatc
aaggagcaccggacgtctgtacaccattttgtgagcagaaagtttggaaagctgatggag
acgaagagcttcgtgacgcatggaggaactgctataacagtgaggctaagagagcgagga
ggaccggccaggaagaggacggcagcagatcgggaggagaaggatatctacacaggtttc
accctaagaaaagaaaaccttgagaccttagaggccatcagctatatggcagcagttctt
ggagttcttccatctgatttctcctacgctggcatcaaagacaagcgagccatcacctat
cagtccatggttgtaaagaagatctctccagaacggctgctggagaaggcctacatgttt
gagaggaaaggaatacaagtgtctaaagtctacctggtatccgaaccccttcggctcgga
aggctagcaggcaaccgttttgaccttgttgtccgggacctgaagccccacaaaagtagt
tcagtagatctagaaagtcttgtgaaagaggcagtggagaacgtaaagactcgagggttt
gtgaactattatggaccgcagaggtttgggacttgccagaaggttcaagcagaccaagtg
ggacttgctctcctgaaagaggacacgaatacagctctcaggttgtttctgagtccagag
gaaggtgatgacctcgaaaataaagccaagcaacatttccatcagacagggaatgccaaa
gaaagcctggctctgatgcccccacacaaggccagagagaggatgatgctacgagctctg
caccgctacggcagcggccccgaaggcagcagtaacgcctggcttagcctgccgcacggg
atgagggtcttttacctccacgcctactgcagtcgtgtgtggaatgaagcagcatgtttc
aggctgcggactctaggagtgagacctgtacagggagacctggtcttagctgtggcagaa
gcagcagaggaagagacccatgcatcacaggtccacgttgttacaggtgcagaagagcag
aactgtgttttttcactagatcaggtggtccttccaatgccaggcaacagtgtgaagtac
ccagagaacacggtcggctcatggtacaaggaaagactgggacaggacggccttgggtcc
tgtagattcagaatcccctcgctgaaactcaacgtcccaggctgctatcgccccctactg
tcttacccccgtaatgtctcctacagcctacaccctgaggaggacacgcaggacactggg
ccctgcagaaccaaactggtgctctcttttaacctgaatgcctcctgttatgcaacagtg
tgtctccgagaaatcatgaagtgtgacccgtag
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