Tachysurus vachellii: 132859178
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Entry
132859178 CDS
T09596
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132859178
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
132859178
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
132859178
NCBI-ProteinID:
XP_060745812
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Position
16:7131618..7145691
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AA seq
873 aa
AA seq
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MGVNDLWSILSPVCESVPLYSLTGQTLAVDLSLWICEAQHVQGMMGKVTKPHLRNLFFRA
SSLLRMGIKLVFVMEGEAPKIKAETMSKRTGMAFRGSKINKSVQKPTTATNTSRGRFKAV
LRECAEMLDYLGIPWVTAAGEAEAMCAFMDAQGLVDGCITSDGDAFLYGAQTVYRNFNMN
TKDPQIDCYKMSRVETELELKRETLVGLAVLLGCDYIPKGVPGVGKEQALKLIQNLKETT
LLQKFSDWQKTASEIKDFTMKKVTHCLVCRHPGSAKAHERSGCVFCDSKTFCQPQDYDSQ
CPCDWHRTEHDRQAFSVETVVKKKTLACDTFPFTEIIDEFLVPKDKTVSSFKRRKPNLLL
MQNFALDKMEWPKHYTSEKVLTLMTYTELTNRSQGTQSSTLIRPSRIYKRRVRNGISCFE
ILWNKPDHYVFPEDCAQDDSDVVRTVEEENLFTLAFPDVVQLFHKDTAEAKDNKLKKKKP
KAAKQKPVVSSDGVSDLFAQMSLKGASHLEPLVSSRKGLTVLETDSDSRTTATSQLTKDL
NCQEVQPTSNCPSFTQQAEAPASPILTGTLSQTQSSLSVSVVIDELHLSSIDWDALSFTA
APSPQPQHSKSDSPPVNKLDEETKTEACSSFTAVRADCVELAAQHADRLSERSLMERVHL
RNMMKKSQLQSDGSGQKYTEGHEPLSEKPKAPSHSETSRINTDSKEKTSTKTQQHKDSLT
VCVPPKYKFVKPKHFNRPSNYREQTNKESVCKKSVCRRQESTGDESDVENQPQSKLKTDV
KPKSRTLQKTVSVQQQHEQNETRCKIFTNSVDTHHRSESIPRKKQPHNTGFSRPNPLVQT
CSTKSDDDDDDDSDASISSPLPLTERLKLKLNK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaatgatctgtggtccatcctgagtccggtgtgtgaatctgtcccgttgtac
agtctcacgggtcaaactctagctgtggatctcagtctgtggatctgtgaagcccagcat
gtccaaggcatgatgggcaaagtcacaaaacctcatctacgcaatttgttttttcgtgca
tcgtcacttcttcggatggggatcaagttggtttttgtaatggaaggagaagctcccaag
atcaaggcagagactatgagcaagagaacaggaatggccttcagaggcagtaaaataaac
aagagtgtccagaaaccaacaacagccacaaacaccagcagggggcgctttaaagctgtg
cttagagagtgtgctgagatgttagactatctgggaatcccgtgggtgaccgcagcaggt
gaggcggaggccatgtgtgcgtttatggatgcgcagggtttggtggacggctgcatcacc
agcgatggggatgctttcctgtacggcgcacaaactgtctacagaaacttcaacatgaat
acaaaggaccctcagatcgactgctataagatgtccagagtggagacggagctggagctg
aagcgagagacactcgtgggtctggctgtcctccttggctgtgattacatccctaaaggt
gttccaggtgtcggaaaagaacaagctcttaaattaatacagaatttaaaagaaacaact
cttcttcaaaaattcagcgattggcagaaaactgcttccgagattaaggattttaccatg
aagaaagtcacccactgcctggtgtgtcgtcaccccggttctgctaaagctcatgagcgc
agtggctgtgtgttctgtgacagtaagacgttctgtcagcctcaggactacgactcgcag
tgtccctgtgactggcaccgcactgagcacgatcgccaggctttctctgtcgaaaccgtc
gtcaaaaagaaaaccctggcatgtgacacgtttcctttcacagagatcatcgacgaattt
ctggttccgaaggacaaaaccgttagcagttttaaaagaaggaaaccaaacctcctcctc
atgcagaattttgctctggacaagatggagtggcccaaacattacaccagtgagaaagtt
cttactctgatgacctacactgaactcacgaacagaagtcaagggacacaatcgtcaaca
ctgatacgacctagtcgaatatacaagcgacgcgtaaggaacggtatctcctgctttgaa
atcctgtggaataaaccagatcactacgtgtttcctgaggactgcgcacaggacgactcg
gacgtagtgaggactgtggaagaggaaaacctgttcactctggctttcccagacgttgtc
cagctcttccacaaagacaccgcagaggccaaggacaacaaattaaagaaaaagaaaccg
aaggcagcgaaacagaagccagtcgtttcttctgacggcgtatctgatctttttgcacag
atgtcactcaaaggtgcttcacatctcgaacccctcgtatcctcaaggaaaggcttaact
gttttagagactgattctgatagccgtaccactgccacatcacaactcactaaagacctg
aactgtcaggaagtccagccaacgtccaactgtccctcattcacacaacaagcagaggct
ccagcttcacccatccttacagggactttatctcaaacccagagttccctttcagtatct
gtagtgattgacgagctccacttgagcagcatcgactgggacgctttgtccttcactgct
gctccgtctcctcagcctcagcacagtaaatctgattctccaccagtgaacaaattagat
gaagaaaccaaaacagaagcctgtagctcttttactgctgtccgagccgattgcgtagaa
ttagccgctcaacacgctgacagactttctgagcgttcgctgatggaaagagtccatttg
aggaacatgatgaagaaatcccaattacagagtgatggatctggacaaaaatacactgaa
ggtcatgagcctctgtctgagaagcctaaagcaccatctcactcagaaactagtagaatt
aacactgattcaaaagaaaaaacatccacaaaaacacagcagcacaaagattcgctcacc
gtctgcgtgccaccgaaatataaatttgttaaaccgaagcacttcaacagaccgtctaac
tatcgtgagcagacgaataaagaaagtgtgtgtaagaaaagcgtttgtagaagacaagag
tctaccggagacgagagtgacgtggagaatcagcctcaaagcaaactgaaaactgacgtc
aagcctaaatcacggacattacaaaaaacagtctcagtacaacaacagcatgaacagaat
gaaaccagatgcaagatttttacaaattctgtagacacacatcacaggtcagaatccata
cctcggaaaaaacaaccacacaacacgggcttctcaagacctaatcctctggtacagaca
tgtagcacaaagagtgatgatgatgatgatgatgattcagacgcttcaatttctagccct
ttaccactaacagagaggttgaaactaaaattgaacaaataa
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