Tachysurus vachellii: 132859302
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Entry
132859302 CDS
T09596
Symbol
samm50l
Name
(RefSeq) sorting and assembly machinery component 50 homolog B
KO
K07277
outer membrane protein insertion porin family
Organism
tvc
Tachysurus vachellii
Pathway
tvc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132859302 (samm50l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tvc03029
]
132859302 (samm50l)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvc02000
]
132859302 (samm50l)
Mitochondrial biogenesis [BR:
tvc03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
132859302 (samm50l)
Transporters [BR:
tvc02000
]
Other transporters
Pores ion channels [TC:
1
]
132859302 (samm50l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
132859302
NCBI-ProteinID:
XP_060745995
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Position
16:complement(18036326..18044448)
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AA seq
469 aa
AA seq
DB search
MGTVHARSMDPVPMHGRDLGVHPDDLEVLEAQQETKKEVLENKDIVVQHVSIEGLGRTKE
DYLGYEISDVFNAKNLIDVMRKSHEARMKLLRLGIFKEVEVLIDISEGDDALPNGLDVTF
EVTEMKRVTGSYNTMVGNNEGSMVLGIKLPNICGRGEKLTFQFSYGTKETSYGLSFFKPQ
PGYFERNFALNLYKVTGQFPWSSLKETDRGVSTELNFPLWMTVHTLKWEGVWRELSCLAR
SASFAVREESGHTLKSALSHTMTIDTRSSAILPRKGALIRINQELAGYTGGDTSFLKEDF
ELQLNKPFLWGSVLSASLWGGMVLPIGGQPISVADKFYLGGPTSVRGFGMYCIGPQSEGD
YLGGDAYWAGGLHLYTPIPLRTARGGFADLFRTHFFLNAGNLCNLNYGEGPHAHLQKLAE
CIRWSYGAGIILRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggggacggtgcacgcaaggagtatggatcctgtcccgatgcacgggcgagacctgggc
gttcaccctgatgacctggaagtgttggaggcacagcaggaaaccaagaaagaggttcta
gaaaataaagatattgttgtgcaacatgtcagcatcgaaggcttgggaagaactaaagag
gactacctgggctatgagatctctgatgtcttcaatgccaaaaatctcatcgatgtgatg
aggaaatcacatgaagctcggatgaagttgctccgtttgggcatattcaaagaggtggaa
gttcttattgacatctcagaaggagatgatgccttgcctaatggtttggatgtgacgttt
gaggtgacggagatgaagagggtgacaggcagttataacaccatggttggaaacaatgag
ggtagcatggtgcttggcattaaattacccaacatttgtggccgtggggagaagctcacc
ttccagttttcttatgggactaaggagacatcgtatggcttgtccttcttcaaacctcag
cctggttattttgaacgcaactttgcactaaatctttacaaagtgactggccagtttccc
tggagttcactgaaggagactgacaggggagtttcaacagaacttaattttccactctgg
atgacagttcacacattgaagtgggagggtgtgtggcgggagctgagctgtctcgcacgc
agtgcgtcgtttgccgtgcgagaggaaagcggacacacactcaaatctgctctctcgcac
actatgactatagacaccaggagctctgccatccttcctagaaaaggtgccttaattcgg
atcaaccaggagctagcgggttacaccggaggagatacaagttttctgaaggaagacttt
gagctgcaattaaacaagcccttcctctggggctctgtgctctcggcatctctttgggga
ggaatggtccttcctatcggaggtcaacccatctccgttgcagacaagttctacctgggc
ggtccaaccagcgtgagaggatttggcatgtactgcatcggcccgcagagtgaaggtgac
tacctgggtggagacgcgtattgggctggagggctccacctgtacacgccaatcccgtta
cgcactgcaaggggcggcttcgccgatctcttcagaacacacttcttccttaacgcagga
aatctctgcaacctcaactacggtgagggtccacacgcacacttgcagaaattagccgaa
tgtattcggtggtcctacggtgcaggcatcatcctccgtttgggaaacattgcaaggcta
gaactcaattactgcattcccatgggtgttcagagcggagacaggatatgcgacggtgta
cagtttggggctgggatccgtttcttgtga
DBGET
integrated database retrieval system
