Tachysurus vachellii: 132859550
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Entry
132859550 CDS
T09596
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor, RNA polymerase I, subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132859550 (taf1c)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
132859550 (taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
DUF7623
Motif
Other DBs
NCBI-GeneID:
132859550
NCBI-ProteinID:
XP_060746252
LinkDB
All DBs
Position
17:complement(8228685..8249519)
Genome browser
AA seq
997 aa
AA seq
DB search
MDYKFPNQLFPYYYLNGPPSLDSKHDYGGWGAYGQVLETSREPFQSDVEGETPFLFQPQC
KVDGELWVPTEPIVTPLLPPYQDTKLLMARPVSPDDFPEHLKYFYVHHYMDSFSVMGQLL
GEHFSFARRHCKEVDGLGKMKYFLRNLNYKNCEVQCLQNVSRYHHLLGDITPDIPSSLLA
ELLHEELIHQQELEHFQPATTGGALAIIPNLTCQNEAFLIYPSGDALDSINFHPMELEFR
DDKPAGVTVADKPLVVNLDGTVRQVSVAQVNDEAYLGLRSDHCCAAWEMKATNHPRPLEV
VKLKQRATSLNVSPHVSGEFVVASESGAAYLWIVGKGLQKIRDEKMNLYFNAKSPWRWCE
FTAHPRVMVYADGTGAELTDIRSSDCRTLFRISGAAACKSGERVVLGKHLAESHGFHHLI
TTQFSAYLLDERMPCVPALKWEHMLESPPCFAHVVPALGQSSSSKILLGAQRAQETRMLQ
YSGGRERACQAEGPIQKLYSPCESLKIQQLPHRRHKAQARLAAHAAGLTATQNNGFLCVF
QLTEAGDIFYQLLKHSDPTNSEPHQSHSVEDSDFEKEQNQRMLSQVELLVNDSHEENDSD
TSDDDQMRISKEVGINSKAAHVLESSIHFAKSKSAHPLRPTIPKMASRNLKLIWKKWLES
LLTKSIGSKRSMRHRKIKTSAVIQCEVQQRDKLEEDKFKRLRKDQAEILKTKKLLVHGET
YLPPLEVIPVPDEVDPKDWPDDLSQRISASWMDGWNNWWEEKLGLNRDAKIEALRRKRRQ
AKKAKARNKVSLASSFTSSISYQDDLSEWSSATSQYLGSDTESINNSQSAPELDDISEQE
VSANNTDVHRVNQNTVGFSDVVEPVKNFLKSPQKTTKSSEQDKAFGTARSPPRDVQKLPS
QAPTMESNSVLFSSSLSSLKESHHSHQKIRRWQQHQDYRNSLFGSSQELKQNDEGSTSAG
LISTKPRPSSLLSLSQVSLRTSSQASQTQKKKSRMGF
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggattataaattccctaatcagcttttcccatattattacctgaacggacctccgagt
ttagactcgaagcatgattacggaggctggggcgcttatggacaggtgctggaaaccagc
agagaaccttttcagagtgatgtagagggagagactccattcctgtttcagccccagtgt
aaggtggatggagagttgtgggtccctactgagccgattgtaacaccacttctccctccc
taccaagataccaagttgttaatggctcggcctgtcagtccagacgacttccctgaacat
ttgaagtatttctatgtgcatcactacatggattcgttctctgtgatgggacagctgctt
ggagaacacttcagttttgccagaaggcattgtaaggaagtcgacggtttgggtaagatg
aagtactttctacgcaacctgaattataaaaattgcgaggtgcagtgtttacaaaatgtg
agccgctatcaccaccttctgggtgacattacccctgacattccctcctctctcctggct
gagcttctacacgaggagttgatccatcaacaggaattggaacacttccaacctgccaca
actgggggcgctctcgccatcatcccaaacctcacatgtcagaatgaagcctttctgatt
tatcccagtggagatgctctagactccatcaattttcaccctatggagctggaattcagg
gacgataaacctgcgggtgtgactgtggccgacaagcctctggtggttaatctggatgga
acagttaggcaggtcagcgtggcccaggtgaacgatgaagcttatctaggcttgcgttca
gatcattgctgtgcagcatgggaaatgaaagccactaaccatcctcgtcctttagaggtg
gtgaagctgaagcaacgagccaccagcctcaacgtcagtcctcatgtttctggagagttt
gtcgtagccagcgagagcggagcagcctatctctggattgtgggaaagggcctgcaaaag
attcgggatgaaaagatgaacctgtacttcaatgccaagtcaccctggcgatggtgtgag
ttcacggctcatccacgcgtgatggtttacgctgacgggactggagctgagcttacagac
atcaggagcagtgattgtcgcacattgttccggatcagtggggcagctgcttgtaagagt
ggagaaagagtggtcttgggcaaacacctggcagaaagccacggcttccaccacctcatt
actacacagttctccgcatacctcctggatgagcgaatgccttgtgtgcctgccctgaag
tgggagcacatgctggagtcgcctccctgttttgcccatgttgtgccagctttgggccaa
agcagcagctctaaaatccttctgggagcccagagagcacaggagactaggatgctgcag
tactctggtggaagagaacgggcatgccaagcagaaggtccaattcaaaaactgtacagt
ccgtgtgagagcctgaagattcagcagctaccacacagacggcacaaagcacaagcaagg
ttggctgcacatgccgcaggcctaactgcaacgcagaacaatggctttctgtgtgtcttc
cagctcacagaggccggggatattttctaccagctgctaaaacattctgacccaaccaac
tcagagccacatcagtcacactcggttgaagacagcgactttgaaaaagagcaaaatcag
cgtatgctgagccaagtagaattgctcgtcaatgacagtcatgaggagaatgactctgat
acttcagatgatgatcagatgaggatctctaaagaagtagggattaactccaaagctgct
catgttctggagtcatccatacattttgctaagagtaaaagtgctcatcccctgaggcca
acaatccccaaaatggctagccgcaatttaaaattaatctggaaaaaatggctggaatcc
ctcttgacaaaatctataggaagcaaacgtagcatgaggcacaggaaaataaagaccagt
gctgtaatacagtgtgaagtccaacaaagagacaagcttgaggaggacaagtttaagaga
ttgaggaaagaccaggcagagatcttaaagaccaagaagctgcttgttcatggggaaaca
tacctgcctcctctagaggtgattccagttccagatgaggtggaccccaaggattggcca
gatgatttgagccagcgcataagtgcctcatggatggatggttggaataactggtgggaa
gaaaaactgggtctaaaccgggacgccaagattgaagccctgagaaggaaacgccgccag
gcaaagaaagccaaagccagaaacaaagtctcacttgcttcaagcttcacttcttccatc
agctaccaggacgatctatctgaatggtcatcagccacaagtcagtatctgggttcagac
acagagagcatcaataattctcagagtgcaccagagcttgacgatatttctgagcaggag
gtatcagctaacaacacagatgttcatagagtcaatcagaacacagtagggttttcagat
gtggtagaaccagttaagaattttttgaaaagccctcaaaaaacaacaaaaagctctgag
caggataaagcctttggtacagcccgatctcctccaagggacgtccaaaaactgccaagc
caggctcctactatggagagcaactctgtacttttttcttcctcattgtccagtttgaag
gagtcgcatcatagccatcaaaaaataagacggtggcagcagcatcaggactaccgcaat
tctctctttggctcttctcaagaacttaaacagaatgacgagggcagtacatcagctggt
ttaatttctaccaaaccaagaccttctagtttactttcattgtcacaagtttcattgagg
acttcttcacaggcttcccagactcagaaaaagaagtctcgaatgggattctga
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