Tachysurus vachellii: 132859654
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Entry
132859654 CDS
T09596
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
tvc
Tachysurus vachellii
Pathway
tvc04010
MAPK signaling pathway
tvc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132859654
04020 Calcium signaling pathway
132859654
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132859654
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
132859654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
132859654
NCBI-ProteinID:
XP_060746447
LinkDB
All DBs
Position
17:5203520..5316694
Genome browser
AA seq
2196 aa
AA seq
DB search
MILATIIANCIVLALEQHLPVNDKTPMSERLDDTEHYFIGIFCFEAGIKIIALGFVFHKD
SYLRNGWNVMDFVVVLTGILAKVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MVPLLQIGLLLFFAIVMFAIIGVELYMGKFQKACFKRGTEELAADYPCGLEPPSRLCPND
TDCRIGSAWKGPNYGITNFDNILFAILTVFQCITMEGWTDILYDTNDALGNTWNWMYFIP
LIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEV
LLAEEDQNAEEKSPLDGAWYKRKQNNPVLKRAKVKKGKNDLISAEEAPPGSPFARASLKS
NKNESSSYFRRKEKRARFFIRRMVKAQSFYWIVLCIVGLNTLCVAIVHYDQPKGLTKALC
WAEFVFLGLFLCEMTLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVVLATSQNGASFGIS
VLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQF
NFDNETPTTNFDNFPSAIMTVFQILTGEDWNAVMYHGIESQGGVPLGMFSSVYFIILTLF
GNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAAKKSIALQKAMEVKEVSPMSAANISIA
AFVKQNRDVLSRSSSVSSVHSLKEQQRSLQKMSIWEQRTSQLRRHNLRNSSEALYSELEP
EDRLRMSSALHLRPDMKAHHDRPLVVDKTHPPDGTDTLEEAPANKHHRCRGENRESVEGR
RHRHHRGSEHRGHQDGGHRNQTEDCDDDREHHHHHSHRSRETDGDSSNGVKGERNLRGHR
EGEAGNGERRRHRLRIKAQTTLDKEETRDNKERDSPSHRDRLNDAEGDGLSLSSVPSPTE
RQEDSDNLKNSTKARSTAVSIPVTVTAPPGDTTVIPMNNIDGERLLLNEEKKDLDELNQN
APKRILPYSSMFVFGQSNPVRRLCHYVVNLRYFEMCILVVITMSSIALAAEDPVNTTAFR
NNVLKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACTGT
KGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVI
AVQLFKGKFFYCTDESKATEKDCRGQFLDYDGDKVEAKARVWKKYDFHYDNVLWAFLTLF
TVSTGEGWPMVLKHSVDATHEDHGPSPGFRMEMSIFYVVYFVVFPFFFVNIFVALIIITF
QEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPQDKQSFQYKMWKFVVSTPFEYSILT
MIAINTVVLMMKFSTASKPYEDMLKWLNIIFTALFTLECILKIIAFGLLNYLKEAWNIFD
FVTVLGSITDILVTEIMQNKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALP
YVCLLIAMLFFIYAIIGMQVFGNIELSYDSAINHHNNFQTFFQALMLLFRSATGEAWHEI
MLSCLGGKKCDKLSGSNGNECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDA
SILGPHHLDEFIRVWADYDPAACGRISYLDMYEMLRHMSPPLGLGKKCPSRVAYKRLVRM
NMPIADDNTVHFTSTLMALIRTALDIKLASGVLAQRLCDADLKREINKVWPNLSSKTVDL
LVTPHKHNELTVGKVYAALMIFDYYKQNRAKRLQEQQSTSGALGKMGSLFKPMLPLTHIH
DQEPSLRSAKLPPPSQTDSSPHPEFMPTTPLLTNGEPAKSSTMKISHSAETLQEGKNSVY
SEDVPKTESQELVEMTDMENNSDVVGFSTLEGHGRAASMPRLSAGFQRSQLRHTTGMYLA
PITDSSPMRRSASSLASQRGGTELNLRDYTLERPPAAQTQEKDRDKLHQHHHHHHHRCHR
RRDKKHKSLDRAISEEQPASLDPAPDLISDPRDRAREWDRDRGRSQERKHHSSSAPDRKQ
RYYSCDRYGNREHFHSRSPGPSRSTSPGDPQEPNRFKTGGNSAKGSPMVFTSGTSTPCRG
RRQLPQTPLTPRPAVAFKSTSSSPLQMAATRSSGPVPTYLSRGQSEHDALLGITHQASPV
PVTRIGSDPNLGPLQRDPHLSEAEDFHDALSTYSSGRFPRTVSATHSSTGAVPSMLQQSQ
SGVPNGYHFTLGVSTSLGSSTRISPSYHDTDKDDWC
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atgatccttgcaaccatcattgccaactgtattgtactggcgttggagcaacatctgccg
gttaatgacaagacacccatgtcagaacgcctggacgacacagagcattactttatcggg
atattctgtttcgaggctggcattaagatcatcgccctgggctttgtctttcacaaagac
tcctaccttcgtaacggctggaacgtaatggacttcgtggttgtcctcaccgggattttg
gccaaggtaggttcggattttgacttaaggacgctgcgggctgtacgagtgctgagacct
ctcaaactggtgtcaggaattcctagtctacaggtggtgttgaagtccataatgaaggcc
atggttcctctgctgcagatcggcttgctgcttttctttgctattgtcatgttcgccatt
ataggagtggaactctacatgggcaagtttcagaaggcatgcttcaaacgcggcacagag
gagcttgctgctgattacccatgtggcttggaacctccatctaggctgtgtcccaatgac
acagactgtagaataggcagcgcgtggaaagggccaaactacggcatcactaactttgac
aacatcttgttcgccatactcactgttttccagtgcatcaccatggaaggatggaccgat
atcctttacgacaccaatgatgccttgggcaacacatggaactggatgtacttcatcccc
ctcatcatcatcggctccttcttcatgctcaacctagtgctgggtgtcttatcaggagag
tttgccaaggaaagagaacgtgtagagaagagacaggagtttctgaagctacgcaggcaa
caacaaattgagagagagttgactggctacctggagtggatttgtaaagcagaggaggtg
ctgttggcagaggaagaccagaatgcagaagagaaatctccactggatggagcgtggtac
aagaggaaacagaacaatccggtgctgaaaagagcaaaggtcaagaaggggaagaatgac
ctcatcagtgccgaggaggcaccccctggatctccctttgcccgagccagcctgaaaagc
aacaagaacgaaagctcatcatacttccgccgcaaggagaaacgagcgcgcttcttcatt
cgccgcatggtgaaagcccaaagcttctactggattgttttgtgcatagtgggcttgaac
acgctttgcgtggccatcgttcactacgaccagcctaaggggctcaccaaagcactctgt
tgggcagagtttgtgttcctgggtctgtttctatgtgagatgacgctgaagatgtacggc
ctggggcccaggaactactttcactcctcattcaactgctttgactttggggtcattgtg
gggagtatatttgaggtggtgttggcaaccagccaaaatggagcctctttcggtattagc
gtcttgagggctctacgcttgctccgaatatttaaagtgaccaagtattggaactctttg
aggaatctggtggtgtctctgctcaactcaatgaaatccattatcagcttgctcttcctc
ctcttcctctttattgtggtctttgctttgctgggcatgcagctctttggaggacagttt
aattttgataacgaaacacctactaccaattttgacaacttcccttctgccataatgacc
gtatttcagattttgacaggagaagactggaatgccgtgatgtatcatgggattgagtct
cagggcggcgtcccgcttgggatgttctcctccgtttacttcatcattcttactctcttt
ggaaactacactcttcttaatgtgttcttggctattgctgtcgataaccttgccaatgct
caggagctgacaaaggatgaagaggagcaagaggaagcagccaaaaagagcatagcactg
cagaaggccatggaggtgaaggaggttagcccgatgtcagcagctaacatttccatcgca
gcttttgtaaagcaaaatcgagatgtgctctctcgcagctcttccgtcagcagcgttcac
tcactcaaagagcagcagcgctccctccagaaaatgtctatctgggagcagcgcacttca
caactacgtcgccacaacctgcgcaacagcagtgaagcactatacagcgagctggagccg
gaagatcggctgcgcatgtcctcagcgctacacctgcggcccgatatgaaggcgcaccac
gatcggcccttggtggtggataaaacgcacccgccggatggcacggacaccctggaggag
gcacctgcaaacaaacaccaccgctgccgtggagagaaccgagagtctgtagaaggacgc
cgacatcggcaccaccgtggcagtgaacacagaggccaccaggatggaggacacaggaac
cagacagaggattgtgatgatgacagggagcaccatcaccaccattctcaccgctcccgt
gagactgatggtgatagcagtaatggagtgaaaggagagagaaatctgagagggcacaga
gaaggtgaagcaggaaatggtgagaggaggagacacaggcttcgcatcaaagctcaaacc
acacttgacaaggaggagaccagggacaacaaagagagagatagtccaagccacagggac
aggcttaatgatgcagagggtgatggcttgagcttgagttctgtcccctcgcctactgag
agacaagaggattcggataaccttaaaaacagcaccaaggctagatcaacagcagtcagc
atccctgttacagtcactgccccgccaggagacaccaccgtcattcccatgaataacata
gatggtgagcgccttctcctgaatgaggaaaagaaggatctggatgaactgaatcagaac
gctccaaaacgcatcttaccctacagctctatgtttgtgtttggtcagtccaatcccgta
cgaaggttgtgtcactatgtggtgaacttgcgttactttgagatgtgcattctcgtcgtg
attaccatgagcagcatcgcactggctgcggaagaccctgtgaatactactgcttttcgg
aacaacgtgctaaaatacttagattacatctttaccggcgtgttcacatttgaaatggtg
ataaagatgattgacctcgggctgctgctccaccccggctcttacttcagagacctgtgg
aatattctagacttcattgtggtcagcggtgccctggtggcttttgcctgcacagggacc
aaaggcaaggacatcaacaccatcaaatctctcagggtcctccgtgtgctccggcctctg
aagaccatcaaaaggctacctaaactcaaggctgtgtttgactgtgtggtgaactctctg
aagaacgtgcttaacatcctcatcgtctacatcctcttcatgttcatctttgccgttatc
gccgtgcagctcttcaagggaaagttcttctactgcacagatgaatctaaagctactgag
aaggactgcagaggtcagtttctggattacgatggagacaaagtggaagccaaggcacgt
gtatggaagaaatatgattttcactatgacaacgtgctatgggctttcctcactctcttc
accgtttccacaggagagggttggcctatggtgctgaaacattctgtagatgccactcat
gaagaccatggcccaagcccaggcttccgcatggagatgtccatcttttatgttgtctac
tttgtggtcttcccgtttttcttcgtcaacattttcgtagccttgatcatcatcacgttc
caggagcaaggggacaaagccatgtctgagtgcagcttggagaagaatgagcgggcatgc
attgactttgccattaatgccaagcccctgactcgctacatgccccaggataagcagtcc
ttccagtacaagatgtggaagtttgtggtttcaacaccgtttgaatattccatcctgact
atgatcgcaatcaatactgtggttctcatgatgaagtttagtaccgcttcgaagccttat
gaagacatgctgaagtggctgaacatcatcttcactgccctttttaccctggaatgtatc
ctgaagatcatcgcttttgggctgctgaactatctaaaggaagcctggaacatattcgat
tttgtaacagtactgggcagtatcactgacatcctggtcactgaaattatgcagaacaag
ctgatcaatcttagctttctgaggctgtttcgagctgctcgactcatcaaacttctgaga
caaggctacaccatccgtatcctgctctggacctttgtccagtcatttaaggcactgcca
tatgtgtgtctgctcattgccatgctcttctttatctacgccatcattgggatgcaggtg
tttggaaacatcgagttaagctatgattcagcaatcaaccatcacaacaacttccagacc
ttctttcaggcactcatgctactcttcaggagtgccacaggcgaggcgtggcatgagatt
atgctgtcatgtttgggtggcaagaaatgtgacaagctctcaggctccaatggaaatgag
tgtggcagtgattttgcgtacttctattttgtctccttcatcttcctctgctccttcctg
atgctaaatctgttcgtggctgtcatcatggacaactttgagtacctgacgcgagatgct
tccatcctcggtcctcaccatctggatgagttcatccgcgtctgggcagattacgaccct
gctgcctgtgggcgcatatcctacctcgatatgtacgaaatgctgcgtcacatgtcccct
ccgctaggtttgggaaagaaatgtccatcacgagttgcctacaagcgcttggtgaggatg
aacatgcccattgctgatgacaacacagtccacttcacatccacgctgatggctctcata
cgcaccgccctggatatcaaactggcatcaggtgttcttgcccagcgtctctgtgatgct
gacttgaagagggagataaataaagtgtggcccaacctgtcatcaaaaaccgtggacttg
ctggtgacaccacataaacataacgagttgacggttgggaaagtgtatgctgcgctgatg
atctttgattactacaagcagaatcgagccaaaagactccaggagcagcagtccacttcc
ggagcactgggtaaaatggggtctctgttcaagcccatgttgcccctcactcacatacac
gatcaagagccatcactcaggagtgccaaactgccacctccttcccaaactgattcatct
ccacatccagagtttatgcccacaacccctctcttgactaacggggagccagcaaaaagc
agtaccatgaagatttctcattcggcagagacgcttcaggagggcaagaattccgtctat
tcagaagatgtgccaaaaactgaatctcaggaattagtagagatgacggatatggagaat
aattctgatgtagtgggcttctccacactggagggccacgggagggcagcctcaatgccc
agacttagtgcaggcttccagcggagccagttgcgccacaccaccgggatgtacctagca
cccatcacggacagcagtcccatgcggcgttcagcctcttctttggcttctcagagagga
ggaacagagttgaatttgagggactatacgttggagcggcccccagcagcacagactcag
gagaaagacagagacaaattgcaccaacatcaccatcatcatcatcatcgatgtcaccgc
cgccgagacaagaagcataaatccctggaccgagctatcagtgaagaacagcctgcctct
ttggatccagcgccggatctaatcagcgatccgcgggatcgagcacgtgaatgggacaga
gaccgaggtcgctctcaagagcggaagcaccactcgtcctctgccccagatagaaagcaa
cgttactattcctgtgatcgttatggaaacagagagcactttcacagccgatcacctggg
ccaagcagatcgacatcacccggagatccacaagaacccaacagattcaaaacgggtggt
aactcagctaagggtagcccgatggtcttcacctcaggcaccagtacaccatgccgtgga
cgaagacagctccctcagacaccgctcaccccaaggcctgcagtggcctttaagtctacc
agctcttctccattgcagatggctgccacccgctcatccgggccagtccctacctacctg
agtcgagggcagtcagagcacgacgccttgctcggcatcactcaccaagcatctcctgtg
cctgttactcggatcggatctgaccccaacctcggcccactgcagcgagacccacacctg
tcagaggccgaagatttccacgatgctttgagcacctacagctcaggacgttttccaaga
acagtctctgccacccattcatccacaggggcggtgccatccatgcttcagcagagtcag
agtggagtacctaacgggtaccactttacccttggagttagtacatctctgggctccagt
accaggatttccccaagctatcatgatacagataaagatgactggtgctga
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integrated database retrieval system
