Tachysurus vachellii: 132859690
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Entry
132859690 CDS
T09596
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132859690 (notch1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
NOD
Ank_4
Ank_5
Ank_3
EGF_3
JAG1-like_EGF2
cEGF
Gram_pos_anchor
Motif
Other DBs
NCBI-GeneID:
132859690
NCBI-ProteinID:
XP_060746520
LinkDB
All DBs
Position
17:complement(7676271..7696956)
Genome browser
AA seq
2416 aa
AA seq
DB search
MNRFFLISLFLGTASLCEGKGLRCLEPCQNGGTCELTANGKPGCSCPADYAGAQCQFPNP
CSPSPCRNSGVCRPRTQGNDVEFTCDCTLGFSGPLCLTPVNHACMSSPCRNGGSCSLLTL
STYSCRCPPGWTGKTCQQADPCASNPCANGGRCSAFDSHFICTCPPSFHGPTCRLDVNEC
AMTPSPCQNSGVCINEVGSYRCRCPLEYAGTHCERPFQPCQPSPCVNGGTCTQTSDTGYA
CTCLPGFTGQDCEHNIDDCVQHACENGGRCMDGVNTYNCHCDKHWTGQYCTEDVDECELS
PNACQNGGTCHNTVGGFHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFYCECP
HGRTGLLCHLDDACISNPCQKGSNCDTNPVNGMAICTCPPGYTGSACNQDIDECSLGANP
CEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPGY
EGMFCQINADDCASQPCLNNGKCIDKINSFHCECPKGFSGSLCQVDIDECASTPCQNGAK
CTDGPNKYTCECKEGFTGAMCEIDINECASNPCHYGVCKDSVASFTCACRPGYAGRLCEI
NINECLSQPCRNGGTCLDRENSYTCSCPKGTTGRNCEINVDDCKSNPCDFGKCIDKINGY
ECLCDPGYTGATCKINIDDCATNPCRNGGTCVDGVNSFTCTCPDGFHDSMCLSQRDECAS
NPCIHGNCQHQANAYVCVCEPGWTGRNCDLNVNECLSNPCVNGGTCRDMTNGYICSCKAG
FTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGELCESVLAPCSTRPCKNRG
VCRESEDYQSFSCACPNGWQGQTCEVDINECVKSPCRNGGVCVNSMGGFQCRCNPGFTGD
LCETDTDDCTPNPCSNGGVCVDRINGFTCVCVAGFRGERCTEDIDECVSAPCRNGGNCTD
CVNSYTCSCPAGFSGINCEINTPDCTESSCFNGGTCVDGINSFSCVCLPGFTGSYCQHDV
NECDSGPCLNGGTCQDGYGTYKCTCPHGYTSTNCQSLVRWCDSSPCKNGGSCWQQGSSFT
CQCASGWTGIYCDVPSVSCEVAAQQQGVSVAALCRNGGQCVDAGSTHLCRCQAGYMGSYC
QEQVDECVPNPCHNGATCTDYLGGYTCECLAGFHGVNCSKEINECASQPCQNGGTCIDLV
NSYKCSCPRGTQGVHCEIDVDDCSPDVDPETGEPRCFNGGRCVDRIGGYGCVCSPGYVGE
RCEGDVNECLSDPCDPNGSYNCVQLVNSYRCECRTGYTGQRCDTVFDGCKDKPCKNGGTC
AVASNTKHGYICKCPPGFSGSSCEYDSSSCGPLRCRHGATCLPGPRCLCPPGYSGRECQT
RLDSPCVSNPCYNGGTCQASPEAPFFHCLCPSHFNGLFCHILDYSFNGGLGLDITPPPAE
SEEAEPRCEVPQCEQRGGDGVCDAACNSHACGWDGGDCSLNFDDPWHECSSALQCWRYFN
DGKCDMQCHSAGCLYDGFDCHQLEGQCNPLYDQYCKDHYSDGHCDQGCNSAECGWDGLDC
AEDVPQRLASGILVLVVHLPPHELLNNSSSFLRQLSALLRTNVALKRHATTGEPLVYPYY
GTEHELSKHTRTAHEWNTNPGHLLQRTARSLSALLRPRHRRELDNMEIKGSIVYLEIDNR
QCYQQSEECFQSATDVAAFLGALASSGNLNVPYIIEAVTSENEAPGRGEMYPMFLALLVL
AVLVLAAVGVVLSRKRKREHGQLWFPEGFKVTETKKKRREPVGEDSVGLKPLKNSDSTLM
DEQLSEWAEEDHCKRFRFDDHTTPDIGIQPDPRQWTQHHLDAADLRLTSIAPTPPRADTD
TDCVDVNVLGPDGLTPLMIASCSGETGEEEEGEEGVIANFLWHGADPHQRTERAGETALH
LAARYARSDAAKRLLESGADANAQDHAGRTPLHAAVAADAQGVFQILIRNRATDLDARMN
DGTTPLILATRLAVEGMVEELINCHADSNAIDDSGKSALHWAAAVNNVEAAVVLLKNGAN
KDLQNNKEETPLFLAAREGSYETAKLLLDHLANRDITDHLDQLPRDIANERMHHDIVRLL
EEYNLVQTPPNLTHSPPICSPEAFLGIRTSPGGTNSANNAKKPRKPGGKEGGKEMKTKKK
KNGDANILSPIESDVSSPPMMTSPFQQSPPITHHLQGLADSQMGGAHLGMAKAFDSGPPR
LSHLGVANNGGPTGHCDWLARAQQQQQGAFSAIMPTMHHGANLPQVMGYPTMQSSHLGTP
AHLLSSHMHPNHLQHQNSNSVPNHALTHHFLGDISGAELQSNSIQTVLPQETQRLPQTMS
TTQFLTPPSQHSYSTPMDNTPNHQPQVPDHPFLTPSPGSPDQWSSCSPHSNLSDWSEGIS
SPPTSIHMNHIPEAFK
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttctttttgatctccttatttctggggacggcttcgctctgtgaggggaaa
ggtctcagatgtttggagccatgtcagaacggtggaacgtgtgagctcacagccaacgga
aaaccaggctgcagctgtcctgcggactatgcaggggcacagtgtcagttcccgaacccg
tgcagtccgtcaccctgccggaacagcggtgtgtgtcgcccgcgcacgcagggcaatgac
gtggagtttacgtgcgactgtacactgggtttcagtgggccactgtgtctgacacctgtc
aatcatgcatgcatgagctcaccgtgccgcaatggaggatcctgttcacttcttacactc
agcacatacagttgccgctgccctcccggctggacaggtaaaacatgccaacaggcggat
ccatgtgcgtcaaacccctgtgcaaatggtggccggtgctcagcatttgattcccacttt
atctgcacatgtccgccaagctttcatggacccacgtgccgcctggatgtaaacgagtgt
gccatgactccctcaccctgtcaaaacagtggagtgtgtataaacgaggtgggctcatac
cgctgccgctgcccacttgagtatgctggcacgcactgtgagcgccctttccagccctgc
cagccttctccctgtgttaacgggggcacatgcacgcagaccagtgacactggctatgca
tgcacctgcctgccaggcttcaccgggcaagattgtgagcataacatagatgactgtgtt
cagcatgcgtgtgagaatggaggccggtgtatggatggagtgaacacatacaactgccac
tgtgacaaacactggacaggtcagtactgcacagaagatgtggatgagtgcgagttatcc
ccaaatgcctgccaaaacggtggcacgtgtcacaatacagtgggcggcttccactgcgtg
tgtgtgaacggctggacaggggacgactgcagcgagaacatcgatgactgcgccagtgca
gcctgctaccacggagccacatgccacgaccgtgtagcatcattctactgcgagtgccca
cacggacgcaccggtctgctgtgtcatctggatgacgcatgcatcagtaacccatgtcag
aaaggctccaactgtgacaccaaccctgtcaatggcatggctatctgcacctgccctcct
ggctacactggctctgcctgcaaccaagacattgatgagtgctcccttggggctaatcca
tgtgagcacggcggccgttgtctgaacaccaagggctcgttccagtgcaagtgcctccaa
ggctatgaggggccacgctgtgaaatggatgtgaacgagtgcaagtctaacccatgccag
aacgatgccacatgccttgatcagattggtggttttcactgcatttgtatgccagggtat
gagggcatgttttgccaaatcaacgcagatgactgcgcctcccagccttgtctcaacaac
ggaaaatgcatcgataagatcaactctttccattgcgagtgtcctaaaggcttctctggg
agcctttgccaagtggacatagacgagtgtgcaagcacgccgtgccagaacggagccaag
tgcactgatgggccaaacaaatacacctgcgagtgcaaagaaggtttcacaggcgcaatg
tgtgagatagatataaacgagtgcgcctcgaacccatgccactacggagtgtgtaaggac
agcgtggcttcgttcacatgtgcgtgtcgccctggatacgctgggcgcctgtgtgagatc
aacatcaacgagtgtttgagtcaaccgtgccgtaatggggggacctgccttgaccgggag
aactcgtacacctgtagctgccctaaaggaaccacaggtcgaaactgtgagatcaatgta
gatgactgcaaaagtaacccatgcgattttggcaaatgcatcgacaagatcaacggatat
gagtgcctgtgtgaccctggatacacaggagcgacttgtaaaattaacatcgacgattgc
gcgacaaacccgtgtcgtaatggtggcacctgtgtggacggtgtgaactcgttcacttgt
acctgccctgacggcttccacgactccatgtgcctctcacagcgggacgagtgcgccagc
aacccctgcattcacggcaactgccagcatcaggccaatgcatacgtttgtgtgtgtgag
cctggctggactggacgtaactgtgacctgaatgtgaacgagtgtttgtctaacccgtgt
gtaaatggcggaacatgcagagatatgaccaacggctacatctgcagctgcaaagcagga
ttcacaggtcctaattgccagactaacatcaatgagtgtgcatccaatccttgcctgaac
cagggcacctgtattgatgatgtagctggatataagtgcaactgcttgctgccttataca
ggtgagctgtgtgagagtgtgttggctccctgctccacacgcccatgtaagaacagaggt
gtgtgtcgcgagtctgaagactaccagagtttctcctgtgcttgcccaaatggctggcaa
ggtcagacgtgtgaagtggacatcaacgagtgtgtgaagtctccatgccgtaatggcgga
gtgtgcgtaaactcaatgggtggcttccaatgcagatgtaatccaggatttacaggagac
ctgtgtgagactgacactgatgactgcactcctaacccctgcagcaatggtggcgtgtgt
gtcgaccgcatcaacggcttcacatgtgtgtgtgtggctggattccgtggtgagcgctgc
accgaggatatcgacgagtgcgtgagcgccccctgccgcaatggtgggaactgcacggac
tgtgtgaatagctatacctgcagctgtccagctggattcagtggcatcaactgtgagatc
aacacacctgactgcactgagagctcctgcttcaatggtggtacatgtgtggatgggatt
aactcattctcatgcgtctgtctgcccggcttcacgggcagctactgccaacatgatgta
aacgagtgtgactcaggcccatgccttaacggtggcacgtgtcaagacggctacggcacc
tacaagtgcacctgcccacatggatacaccagcaccaactgccagagtctggtgcgctgg
tgtgattcatctccctgtaaaaatggaggctcatgctggcagcaaggttcatctttcaca
tgccagtgtgccagtggttggactggaatctactgcgatgtgcccagtgttagctgcgag
gttgccgctcagcagcaaggtgtatctgtggcggctctgtgccgtaacggaggccagtgt
gtagatgcaggcagcacacacctgtgccggtgccaggcaggctacatgggcagctactgc
caggaacaggtggacgagtgtgtgccaaacccatgtcacaacggtgcaacctgtactgat
tacctgggtggatatacatgtgagtgtcttgcgggatttcacggagtaaactgcagcaag
gagataaacgagtgtgcgtctcagccttgtcagaacggaggcacctgcatcgatctcgtc
aattcatacaagtgttcctgccctcggggaacacaaggtgttcactgtgaaatcgatgtg
gacgattgttccccggatgttgatcccgagaccggcgagccacgctgttttaatggcgga
cgctgtgtggaccggataggtggctatggttgtgtatgctcaccgggctacgtgggtgag
cgctgtgaaggtgatgtgaacgagtgcttgtctgacccctgcgacccgaacggatcctac
aactgtgttcagctggttaacagctaccgctgtgaatgccgcacaggatatacaggccag
cgctgtgacactgtgtttgacggatgtaaggataaaccctgcaaaaatggtggaacctgc
gcagttgcaagcaacaccaaacatggatacatctgcaaatgcccaccgggtttctctggg
tcatcgtgtgagtatgactcaagctcatgtggccccctgcgctgccgtcatggtgccact
tgtctcccaggtccacgctgcctttgcccaccaggttacagtggacgcgagtgccagaca
cgcctggattctccatgtgtttccaacccgtgctacaatggtggcacatgccaggcatct
ccagaggctccattcttccactgcttgtgcccatcacacttcaacggcctcttctgccac
atcctagactattcattcaacggaggcctgggtctggacatcacccctcccccagctgag
tcagaagaggcagagccacgttgtgaggtgccacagtgtgagcagcgaggtggtgatggt
gtttgtgatgcagcatgcaacagtcatgcatgtggctgggacggcggtgactgttccctc
aattttgatgacccctggcatgagtgcagttctgctctgcagtgttggaggtacttcaac
gacggcaagtgcgacatgcagtgtcacagtgctggctgtctctacgatggttttgactgc
caccagctcgagggccagtgcaatcccttgtatgatcagtattgtaaggaccactactca
gacggccactgtgatcagggttgcaacagtgctgagtgtggctgggatgggctggactgt
gctgaggacgttccacaacgtctggcatctggcatccttgtacttgttgtgcatttgcca
ccccatgaactcctcaacaactcttcctcgtttctgcgccagcttagtgccctcttacga
actaacgtcgccctcaagcgtcatgccacaacaggcgagcctctagtttacccctactat
ggcactgaacatgaactgagcaaacacacacgtaccgcccacgagtggaacactaaccct
ggccaccttctgcagcgcactgctagaagcctgtcagcgctgctcaggccgcgtcatcgt
cgggagctggacaatatggagattaaaggctccattgtatatctggagattgataaccgg
caatgttaccagcagtcagaggagtgttttcagagtgcaacagatgtggctgcattcctg
ggagcgctggcctccagcggcaatctcaatgttccttacattatagaggctgtcaccagt
gagaatgaggcccctggtcgtggagagatgtaccccatgtttctggcactactggtcctg
gcagtgttggtcctggctgctgttggagtcgtgctgtcacgcaagcgaaagcgtgagcat
ggccagctctggttccctgagggctttaaagtgaccgaaaccaaaaagaaacgtagagaa
cctgtgggagaggactcagttggacttaagcctctgaagaactctgatagcacactgatg
gacgagcagctgagtgagtgggcagaggaagaccactgcaaacgcttcaggtttgatgac
cacaccacaccagacataggtatccagccagatccacgtcagtggactcagcaccatctt
gatgcagccgatttgcgcttgacctctatagctcctacaccaccacgggctgacaccgat
actgactgtgtagatgtgaatgtacttggccccgatggcctgacgcctctgatgatcgcc
tcatgcagtggtgagactggtgaggaggaggagggcgaggaaggcgttattgccaacttc
ctctggcatggtgctgatccacaccagcgtaccgagcgggcgggtgagacggcactgcac
ctggctgcccgttatgcccgatctgacgctgccaagcgccttctagaatctggtgcagat
gccaatgcacaggaccatgcaggacgcacaccactacatgccgctgtggctgctgacgca
caaggagtcttccagatcttaatcaggaatcgggctacagatctggatgcccggatgaac
gatggcacgacaccactcattctggccacacggcttgccgtagaggggatggtggaggag
ctcatcaactgccatgctgattctaatgctattgatgactctggaaaatctgctctccat
tgggctgctgctgtcaacaatgttgaggctgctgtagtgcttctgaaaaatggagccaac
aaggatctacagaacaacaaggaggaaacgcctctcttcttggctgcacgtgagggtagc
tacgagacagcaaagcttctcctcgaccacttggccaaccgtgacattacggatcatctg
gatcagctgccacgtgacattgccaatgagcgtatgcaccacgatattgtgcgtctactg
gaagaatataatctggttcagacccctccgaatctgactcattcgcccccaatctgctcg
cccgaggctttcctgggcatcagaactagccctggtggcaccaatagcgcaaataatgca
aagaaaccccgcaaacctggaggaaaggagggaggaaaggaaatgaagacaaaaaagaaa
aagaacggagacgcaaacatcctctctccaattgagtcagatgtctcttcacccccaatg
atgacatcacccttccaacagtccccacctatcactcatcacttgcaagggttggctgac
tcccaaatgggtggggctcatctggggatggcaaaagcatttgattcaggtcctccacgc
ttgtcccatctcggagtagctaataatggaggcccaacagggcattgtgattggctggca
agagcacagcagcagcaacaaggagcgttctcagctataatgccaacaatgcaccatggc
gctaacttgccacaagtgatgggctatcccacaatgcaaagcagccacctgggtacacca
gctcacctgctgtctagccacatgcatccaaaccatctgcagcaccaaaactcaaactct
gtccccaatcatgcccttactcaccacttcctgggtgacataagtggggcagaacttcag
tccaactcaatccaaaccgtgctgccacaggagacgcagcgcctgccccagaccatgtct
accacacagtttctaactcctccatctcagcacagttactccacccccatggacaacaca
ccaaatcaccagccacaggtccctgatcatcccttcctgactccatcccctggttctcca
gaccaatggtctagctgctctccacattccaacttatctgactggtcagagggtatctca
agcccacccaccagcattcacatgaaccatatccctgaagcattcaagtaa
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