Tachysurus vachellii: 132859701
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Entry
132859701 CDS
T09596
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
tvc
Tachysurus vachellii
Pathway
tvc03030
DNA replication
tvc03410
Base excision repair
tvc03420
Nucleotide excision repair
tvc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132859701 (rfc2)
03410 Base excision repair
132859701 (rfc2)
03420 Nucleotide excision repair
132859701 (rfc2)
03430 Mismatch repair
132859701 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvc03032
]
132859701 (rfc2)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132859701 (rfc2)
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132859701 (rfc2)
DNA replication proteins [BR:
tvc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132859701 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
132859701 (rfc2)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
132859701 (rfc2)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132859701 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
132859701 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
RCF1-5-like_lid
AAA_16
Mg_chelatase
AAA_24
AAA_11
Viral_helicase1
Rad17
RuvB_N
AAA_assoc_2
AAA_19
MipZ
nSTAND3
ABC_tran
AAA_18
AAA_28
AAA_5
DNAX_ATPase_lid
AAA_25
AAA_30
MeaB
AMP-binding_C_3
AAA_23
RNA_helicase
MCM
NTPase_1
SLFN-g3_helicase
DUF815
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
132859701
NCBI-ProteinID:
XP_060746541
LinkDB
All DBs
Position
17:complement(15651139..15656580)
Genome browser
AA seq
353 aa
AA seq
DB search
MDVEMKEADGEQSQSDVQSNKKEDATKSSTTTYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKARHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDEQIMMRLMEVVEKENLHTTNDGLEAIIFTAQGDMRQALNNLQSTHS
GFGFINSENVFKVCDEPHPLLVKNMLEHCVTSNIDEAYKIISQLWSLGYSPEDIIGNIFR
VCKTLQMPEYLKLEFIKEIGYTHMKISEGVNSLLQLAGLLGRLCSKTAAPEAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagatgaaagaagctgatggcgaacaaagtcagtcagatgtacagagtaat
aaaaaagaagatgctaccaagtcttcaacgaccacatacgaactgccctgggtggaaaaa
tacagaccgctgaagctgaacgaaatagttgggaatgaagaaactgtcagcagactggag
gtgtttgccagagagggaaatgtacccaacatcattattgccggacctcctggcactgga
aaaacaacaagcattttgtgtttggccagagctcttctaggcccagcgatgaaggacgct
gtgctcgagctaaatgcttcaaatgatcgaggtattgatgttgtccgaaacaagatcaag
atgtttgctcagcaaaaagttactctccccaaagcacgtcacaaaatcatcatcctggat
gaagccgacagcatgactgatggagcacagcaagctctgaggagaacaatggagatctat
tcaaaaaccaccagatttgctttagcctgcaatgcatcagataaaattatagagccaatt
cagtcacgttgtgcagtgctgcgctacagtaagctgagggacgaacagatcatgatgcgg
ctgatggaggtggtggagaaggagaacctgcacaccaccaacgatggactggaggccatt
atcttcaccgcccaaggagacatgagacaggcactaaataacctgcagtccacgcattct
ggatttggttttatcaacagtgaaaatgtgttcaaggtatgtgatgaaccacacccccta
ctggttaaaaacatgcttgaacactgtgtcaccagcaacatcgacgaggcttacaagata
atatcacagctttggtcactcggctactctcctgaagatataatagggaacatcttcaga
gtgtgtaagacgttacaaatgccagagtacctgaaactggagtttatcaaggagattggc
tacacccacatgaagatatcagaaggagtgaactctctgctccagcttgctggactatta
ggacgtctctgcagtaagactgcagcccccgaggccagctaa
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