Tachysurus vachellii: 132859737 Help Entry 132859737         CDS       T09596                                  Symbol nup188 Name (RefSeq) nucleoporin NUP188   KO K14311   nuclear pore complex protein Nup188 Organism tvc  Tachysurus vachellii Pathway tvc03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:tvc00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     132859737 (nup188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tvc03019]     132859737 (nup188) Messenger RNA biogenesis [BR:tvc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      132859737 (nup188) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like Motif Other DBs NCBI-GeneID:  132859737 NCBI-ProteinID:  XP_060746611 LinkDB All DBs Position 17:complement(7047909..7072248) Genome browser AA seq 1728 aa AA seqDB search MADSEFCIRSSRELWTILLGRSALREPSQIESELERYGERLLQGLAYYKPPSSSSADKLK ADKDVPQSLKEFGLRISKLLGLDEQQSVQILQCYLQEDYRGTRNSLKTVLQDERQSQALL LKIVDYYYDERVCLLRCILLLLTYFQDERHPYKAEYATCVNKLEKDLVSNYQQQFEALFN AEAPTWETHGNLMTERRVSLWFSQCLREQALLLEVLFLYYAYFEMPPSDLLTFTQLFKEQ GFGQRQTNRHLVDKSMDALVDRIGYFSCLILVEGMDIDFLHKCALEDRTEQHQLFSTHES NKEMDQSLLTFGDIPHHGPVLLAWVLLRHTLQPVEAGPIIKRLSHTTLQLGVFQYLTDML QALGSMGNNCTASTARMCIYGLLSFVVTSFEEDTLGSQQHLINVACEVLAAPSLAELFWE SKPNVGLEMILDSAVGVFPYKTGPLLQILTALLSEKFTAKRVYMFLDKMSFYTEVYKHKP GDVLSREDETLWRRQTPKLLYPLGTGQTNLRMPQGCYGQVSASEDGYTVRWDYSYSSWTL FTCEIEMLLHVVSTADVLAHCERVKPILDLVHKIISTDWTVSDCLLPLTSRIYMLLQRLT SVINPPVDVIASCVNCLIVLAARQPGKVWSSLQHTGFLPFASTPLTNMAQTISAEGMKAG NYGNLLVLIEQPRGDYAVTIAFLRLVTTLVKGQVGSTQSRGLIPCVLLVLKEMLPTYHKW RYNTHGVREKIGCLILELVHAILNLCPEGESQGSTPSLQSLCIYSLTNTEAGQAVVNIMG VGVDTINTVLAAQPSSGSCEGPGQVLIQTVKLAFSVTNNVIRLKPHSDTVSPLEQALTQH GGHGNNLIAVLAKYIYHKHDPALPRLAVQLLKRLASVAPMSVYACLGSDAAAIRDAFLRH MQSKTVDLRVKVTILEFLTVAVETQPGLIELFLNLEAKEGSEGTKEFSLGEWSCLSVVLE LLDSETQNQSWCPPLLQRAALAFLHALWQDRRDSALSVLRSRKKFWDNLTAPLFGTLPSP SETTEPCVLESCAFVMKIIALEIYYVVSGQLEDSLKAALQRLSSQRRYEFWSQYVRRLVC VACENEEGGMRSLPETQMLISAWRTLLILSTSHSDVMHLKEDSVRLKLFMDVLEGTKATL LMPQSVACLRLGTMMATLLLIILKQWKSVLVSAPALLPPLSLMLESVLQADQQLMERTKA KLFSALISALHIQGLNGGEITQLPQLLLCVCETVHDEAMALIDNTRHMIQKGDVQEDSME TDAPHGVQKDQRDSVCVLALHLSKELCRADEDGEQWLQVMRKLPVLPSVLSALELSLRSK HNLYFTEAALHLLLTLARTSQGAAAVAGAGVIQSICLPLLSVYEGPANGATQAFSRKPVD APSWLGVYRLCLSLMESLLKTLRYNFINEALDFVGVHQERILQCLSAVRTVQSLACLDEA DHTVGFLLQLSSFCKEWHFHLPQLLRDVQVNLCYLCQTCTYLLHSKKMLHHYLQAKNGEA LPQRSRPQQALQPVTKEQPSVGERDEMESKALQAVQCSLLKILSKTLATLQHFTPDCCQI LLDQSMDLAEYRTLFVLSFTTPAFDSDVAPSFGTLLATINVALSMLGEIEKKKEPVVSSE ETQAMKSLLMFSMENCFYVLISQAMRCLKDPAVLPRDKQRVKQELSSELSTLLSTLYRFF RRGSPSSPASGLLPSPQTKPTNPGLKVTQEGQEPFIQLVQAFVRHVQR NT seq 5187 nt NT seq  +upstreamnt  +downstreamnt atggcggactcggagttttgtatacgaagcagtagggagttatggaccatcttgctgggg agatcagctctgcgtgaaccgtcccagatcgaatccgagttagaacggtatggagagcgg ttgttacagggcctggcgtactacaaacctcccagctcgtcctcagcagacaagttgaag gcagataaagacgttcctcagtctcttaaagaattcggacttcgcatcagcaaacttctg ggtctggatgagcagcagagtgtacagattctgcagtgttacctgcaggaagactacaga ggaacccgaaactcactgaagaccgttctgcaagatgagagacagagtcaggccttactg ctcaagatagtagattactactatgacgagagagtttgtctcttgcgctgtatcctccta ctcctcacctacttccaggatgagaggcatccctataaagctgagtatgcaacctgtgtg aacaagctggagaaagatcttgtgtcaaattaccaacagcagttcgaggctctgttcaat gcagaagctccaacatgggaaacccatggaaatctcatgacagagagacgggtgtctctg tggttctcccagtgcctgagggagcaggctttgctgttggaggtcctattcctttactac gcctacttcgagatgccccctagtgaccttttaacctttactcagctttttaaggagcag ggtttcggacaacgccaaacaaacaggcatcttgtggacaagagcatggatgcactagtg gaccgaatcggatatttcagctgtctgatccttgttgaggggatggacatcgacttcctg cataaatgtgccctggaagaccgaacagaacagcaccaactcttcagcacacacgaaagc aacaaggagatggatcagtcgttgctgacgtttggggatatccctcaccacggcccggtt ctgctagcctgggttcttctgagacacacactgcaaccagttgaagctggacccatcatc aaacgcctcagccacacaacattacagctcggggtgtttcagtatctcacagacatgttg caggccctcggcagcatggggaataattgcactgccagcactgcacggatgtgcatctac ggtctcctctcctttgtggtcacttcgtttgaagaggacacgctgggcagtcagcagcac ctgatcaacgttgcctgcgaggttctcgccgccccgagtctagccgagctcttctgggag tcgaaacctaatgtgggtttggagatgatactggactcagcagtgggagttttcccttat aagactggaccgttattgcagatactcacagcactgctgtctgagaaatttaccgccaag agggtgtacatgtttctggataaaatgtccttctatacggaggtgtacaaacacaaaccc ggcgacgtgctgtctagagaggacgagacgctctggaggagacagacacctaaacttctc tatccactgggtacagggcagaccaacttgcgcatgccgcaggggtgttacggccaagtt tcggcgagcgaggacggctacacggtgcgctgggattattcttattcttcgtggaccctc ttcacctgcgagattgagatgctgctgcatgttgtttctactgctgatgtgttggcgcac tgtgagcgagtgaagccgattttggacctggtgcataagatcatcagcactgactggacc gtgtctgactgcttgctgcctctcacttcacgcatctacatgctgctacagaggttgact tctgtaataaacccaccggtggacgtcatcgcttcctgcgtcaactgcctcatcgtgctt gctgcacggcaacctggcaaggtttggtccagtctgcagcacactggcttcctgcccttt gcatcaacgcccctaaccaacatggcacagaccatcagtgctgaaggcatgaaggcaggt aactacggtaacctgctggtgctgatcgagcagccacgaggagactatgcagtgaccatt gcgtttttgagactggtgaccacactcgtgaagggtcaggtgggcagtacccagagcaga ggcctcattccctgtgtgcttctcgttctgaaggagatgctgcctacttaccacaagtgg cgctataatacacacggtgtccgggagaagattggttgtttgattctagagctggtccat gcaatacttaatctatgtcctgaaggggagtcacagggaagcactcccagcctgcagtct ttatgtatctacagtctgacaaacactgaagcaggccaggctgtggtgaacattatgggt gtgggagtggacaccatcaacacagtgctagcagctcagcccagcagtgggagttgtgaa ggtcctggtcaggtgttgattcagacagtgaagttggccttctctgttaccaacaacgtc atccgactcaaaccacattcagacactgtgtctcctctggagcaggcacttacacagcat ggtggtcatggcaacaatctaatagcagttctggccaagtacatttaccacaaacacgat cctgctctgccgagactcgctgttcagctactaaagagactcgcctcggttgcacccatg tcggtgtatgcttgtttaggcagtgatgcagcagcgatcagggacgcgttccttcgacac atgcaaagcaaaacggtggacctacgtgttaaagtcaccatcttggagtttctcactgta gctgtggaaacacaaccgggtctcatcgagctcttcctcaacctcgaagccaaggagggc agtgaggggacaaaggagttttctctgggtgagtggagttgtttgtctgtggttctggag ctgttggactcagagacgcagaaccagtcatggtgtcctcctctgctgcagcgggcagcg ctcgctttcctacatgcgctgtggcaggaccgcagagacagtgcactgtctgtgctacgc agcaggaagaagttctgggacaatctgacagcaccacttttcgggacacttccttcacca tcagagaccacagagccgtgtgttttggagtcatgtgcctttgtaatgaagatcatagcc ctggagatctactatgttgtcagcggtcagctggaggactctctgaaagctgcactgcag cgcctcagctcccagcgccgttatgaattttggtcccagtatgtccggaggctggtgtgt gtggcctgtgagaatgaagaaggaggaatgaggtcactacctgagactcagatgcttatc tcagcttggaggaccctgctcatactctccactagccattctgatgtaatgcaccttaag gaagactctgtgaggctaaagctcttcatggatgtcctggaaggaactaaagcaacatta ctgatgccccagtctgtagcatgtctgcgtttgggcaccatgatggctaccttgctgctc atcatcctcaaacaatggaaaagtgtgttggtatcagctccagctctccttcctcctctc tctctgatgttagagagcgtacttcaggctgatcagcagttgatggagagaaccaaagcc aagcttttctcagctctcatatcagctctgcacattcagggccttaatggaggagagatt acccagctgcctcagctgttactgtgcgtatgtgagactgtccatgatgaggctatggct ttaattgacaacacacgtcacatgatccaaaaaggtgacgttcaggaggatagcatggag actgatgcaccacacggcgtccagaaagaccagcgagactcggtgtgtgtgttagctctg cacctgtctaaagagctgtgcagggctgatgaggatggtgagcagtggctgcaggttatg aggaagctgcctgtccttccctcggttctcagtgcccttgagctcagtctgcgctcaaaa cacaacctttacttcaccgaggcagctctccacttgctgcttacactagctagaacctcg cagggggcagcagcagtagcaggtgccggtgtgatccagagcatctgtcttcctcttctc agtgtgtatgaaggcccagctaatggagccacacaggcgttctcccgtaagcctgtcgat gccccatcctggctcggtgtgtatcggctctgtctgtctctgatggagagtctactcaag accctgcgatacaacttcatcaacgaggcactcgactttgttggagttcaccaagagcgc atactgcagtgcctcagtgcagttcgtacagttcagtctctagcgtgtttggatgaagcc gatcacacagtgggtttccttctgcaactgtccagcttctgtaaagagtggcacttccat ctaccacagctgctcagagatgtgcaggtgaatctctgttacctgtgtcagacatgtaca tatcttttgcacagcaagaaaatgttacaccactacctccaggcaaaaaatggggaagct ctacctcagaggtcccgtccacagcaagctctacagcccgttactaaagagcagccgtcg gtcggcgagcgagacgagatggagtctaaagccctgcaggcggtgcagtgcagcctgctg aagattctcagcaaaactttggccacattacagcactttacaccagactgctgccaaatc cttctagatcagtctatggaccttgcggagtacaggacattgtttgttctaagttttacg acacccgcctttgattcagacgtcgctccgtcgtttgggactctgctggccaccatcaat gtggcgctgagcatgctgggagagatagagaaaaagaaggagccagtggtgtcatctgag gaaactcaagcaatgaagtccttgttgatgttttccatggagaactgtttctacgtgttg atctcacaggccatgcggtgtttaaaagatccagctgttctgcctcgagacaaacagaga gttaaacaggagctcagctctgaactgagcacacttttatcaacattgtacaggtttttc cggcgaggctcaccttcgtcccccgccagcggacttctgccttcccctcagaccaaaccc acaaatcctggtttaaaggtcacgcaagagggccaggaaccattcatacagcttgtccag gctttcgtacggcatgtccaacgctag

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