Tachysurus vachellii: 132859786
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Entry
132859786 CDS
T09596
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03082
ATP-dependent chromatin remodeling
tvc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132859786
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132859786
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tvc01009
]
132859786
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132859786
03036 Chromosome and associated proteins [BR:
tvc03036
]
132859786
Protein phosphatases and associated proteins [BR:
tvc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132859786
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132859786
SWI/SNF complex
132859786
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132859786
PBAF complex
132859786
SWI/SNF complex
132859786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
132859786
NCBI-ProteinID:
XP_060746715
LinkDB
All DBs
Position
17:complement(2905370..2912367)
Genome browser
AA seq
370 aa
AA seq
DB search
MALSKTFGQKPIKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERKKI
AASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRNSQWVPTLPNSS
HHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQTEVLVPIRLDMEIDGQK
LRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILDEQTD
QRVIIKLNIHVGNISLVDQFEWDMSEKENSPETFALKLCSELGLGGEFVTTIAYSIRGQL
SWHQRTYAFRSDFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRM
RRLANTAPAW
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgagtaaaacattcggccaaaagccgataaaatttcaactcgaagaagatggc
gatttttacatgataggttcagaggtaggaaattatctgcgtatgttcagaggatctctg
tacaaaagatacccgtcactgtggcgcagactcgcttcagtagaggagaggaaaaaaatc
gcagcatcgtcacacgccaccagtgtgactctgctgaaggcgtctgagtgtgaagagatc
ttcgagggcaacgatgaaaagtacaaggcagtgtccatcagcaccgaacctccagcctac
ctcagggagcagaaggccaagaggaacagtcagtgggtccccacgctcccaaacagttcc
caccatctggacgctgtgccttgctccaccacgatcaaccgaaatcgtatgggacgtgac
aagaaaaggacgtttcctctgtgctttgatgaccacgaccctgcagtgatccatgaaaat
gcctcacagacagaggttcttgttccaatccgattggacatggagatcgacggccagaag
ctcagagacgccttcacctggaacatgaacgaaaagctgatgacaccagagatgtttgca
gagatactgtgtgatgatttagacctgaaccccctgacctttgtcccagccatcgcctct
gccatccggcagcagatagagtcctaccctactgacagcatcctggatgaacaaactgat
cagagagtcatcatcaagctgaacatccacgtgggaaacatttctttggtggaccagttt
gagtgggacatgtcagagaaggagaactctccagaaacttttgcactgaagctgtgttct
gagctcggcctcggaggagagttcgtcacgaccatcgcctacagtatccgaggccagctc
agctggcatcagaggacgtacgccttcaggtctgatttcagtgagaaccccttgccgacg
gtagagatcgccattcggaacacgggcgatgccgatcagtggtgccccctgctggaaacc
ctgacggacgcagagatggaaaagaagatcagagatcaggacagaaacacaaggcgcatg
cggcgactcgccaacacggccccagcctggtag
DBGET
integrated database retrieval system
