Tachysurus vachellii: 132859980
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Entry
132859980 CDS
T09596
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b isoform X1
KO
K09444
interferon regulatory factor 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
132859980 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132859980 (irf1b)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
132859980 (irf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
132859980
NCBI-ProteinID:
XP_060746977
LinkDB
All DBs
Position
17:9354904..9357766
Genome browser
AA seq
306 aa
AA seq
DB search
MPVSRMRMRPWLEDMIDSNAIAGLVWVDKEKKMFSIPWKHAARHGWEMDKDACLFKQWAI
HTGKFKPGITEPDPKTWKANFRCAMNSLPDIEEVKDKSVNKGCEAVRVYRMLQVVKNKTK
RSSKSQDNRRRKKGRRTDTDMASNEEHLYIHKQQDMITQENIIDSTESMNTASPTYDVPD
CSGYEVEIGPDSTNDIYTGRFQVSPVHESDYEEKAIVEITRQLELDSTQWLQSNSSGKGF
LCNEVAMTESYHCPESQWSDTSGEELELRFYTELIPGLPSEDLLSYTDMWNTNTHTAGLP
QISCLL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtccagaatgcgcatgcggccctggttagaggatatgattgactcaaacgca
atcgctggacttgtctgggtagataaggagaaaaagatgttctccataccttggaagcat
gctgcacgccatggatgggagatggacaaagatgcctgtttatttaaacagtgggcgatc
cacacaggcaaattcaagccaggaatcactgaacctgaccccaaaacgtggaaagccaac
ttccgttgtgcaatgaactcacttccggatattgaagaagtgaaggacaaaagtgtcaac
aaaggctgtgaagctgttcgtgtctaccgcatgcttcaggttgtcaagaataagaccaag
aggtcctctaaaagccaggacaacaggaggcggaaaaagggaaggaggactgatacagac
atggcatcaaatgaagagcacctttacatccacaagcagcaagacatgatcactcaggag
aacatcattgacagcactgaaagcatgaacacagcaagcccaacctatgatgtgcctgac
tgctcaggttatgaagtggaaattggccctgacagtacaaatgatatctatactggcagg
ttccaggtttcccctgttcatgagtcagattatgaggaaaaagctattgttgagatcaca
cggcaattggagcttgatagtacacagtggctacaaagcaatagcagcggaaaggggttc
ctgtgcaatgaagtagccatgacagaatcttaccactgtccagagagccaatggagtgat
acctcaggagaggagcttgagctgcgcttttacacagaactgataccaggactgcccagt
gaagatctcttaagctacacagatatgtggaataccaacactcacacagctggccttcca
caaatcagctgtcttctctga
DBGET
integrated database retrieval system
