Tachysurus vachellii: 132860161
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Entry
132860161 CDS
T09596
Symbol
thbs4b
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
tvc
Tachysurus vachellii
Pathway
tvc04145
Phagosome
tvc04510
Focal adhesion
tvc04512
ECM-receptor interaction
tvc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132860161 (thbs4b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132860161 (thbs4b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
132860161 (thbs4b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132860161 (thbs4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132860161 (thbs4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvc04147
]
132860161 (thbs4b)
00536 Glycosaminoglycan binding proteins [BR:
tvc00536
]
132860161 (thbs4b)
Membrane trafficking [BR:
tvc04131
]
Endocytosis
Phagocytosis
Opsonins
132860161 (thbs4b)
Exosome [BR:
tvc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132860161 (thbs4b)
Exosomal proteins of colorectal cancer cells
132860161 (thbs4b)
Exosomal proteins of bladder cancer cells
132860161 (thbs4b)
Glycosaminoglycan binding proteins [BR:
tvc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132860161 (thbs4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
EGF_MSP1_1
cEGF
DUF7630
Motif
Other DBs
NCBI-GeneID:
132860161
NCBI-ProteinID:
XP_060747248
LinkDB
All DBs
Position
17:complement(7836291..7852332)
Genome browser
AA seq
951 aa
AA seq
DB search
MTGRMQLLVAISLILSLSSAVDAESTVYNLLTSPDCLPDLLHGGLAEQRVTELFLLATFR
LQPRTGTTVFGLYNPRDNSKYFEFTILGKLNKATLRYLNLDGRVVTVTFNNLKLADGEKH
HLLFHLKGLEVPYNPASFPPGQATLPVPGVELHLDCRLVETLRDLPAVFNGLSNKHGVEL
KTMQKKGQEELEELKLAYGDSIENVASLQGCHTHQSDSVQTLGLNTKQLTNQMLELTKVI
NELKDVLVQQVKETAFLRNTISECQACGLGGTTVKQQCAPGVCFRPDMCIETVDGVECGP
CPDGYTGDGYSCDDVDECQFNPCFPGVKCVNTAPGFRCEACPNGYTGQPVEGVGVAFAQT
HKQVCDDIDECSGMNNGGCTANSICLNSMGSYRCGGCKTGFTGDQLRGCKPEKSCGNRLQ
NPCDPNAQCIEERDGTITCQCGIGWAGNGYLCGKDTDIDGYPDEKLRCRDPTCKKDNCVL
VPNSGQEDADSDGHGDACDPDADGDGILNEQDNCWLKPNVNQINSDKDSHGDACDNCLTI
ENPDQRDTDSDGLGDACDDDMDGDGIKNFLDNCQRVKNQDQKDRDRDGVGDACDSCPDIP
NPNQSDIDNDLVGDSCDTNQDSDGDGHQDSKDNCPLVINSSQLDTDKDGLGDECDDDDDN
DGIPDFLPPGPDNCRLVPNPDQTDDNNDNVGDICESDFDQDKVIDRIDNCPENAEITLTD
FRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNT
VTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHL
RNSLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRVRFYEGTKLVADSG
VTIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTQPILYPL
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgacagggaggatgcagcttctcgtagccatatctctaattctcagtttaagttcagct
gtggatgctgagtcgaccgtgtataacctcctgacatcaccggattgtctgccagatctc
ctgcatggaggtttagcagaacagagagtaacagagctcttcctgcttgcaacattccgc
ctgcaaccccgaactggaaccacagtttttgggctctataatccacgagacaacagcaaa
tactttgagttcaccattttgggcaagctgaacaaagctacactacgttacctaaacctt
gatggcagggtggtcactgtaacctttaacaacctcaagctggcagacggagagaagcac
cacctcctttttcacctgaaaggcctggaggttccatacaacccggcttctttcccacct
ggccaggcaactttgccagtgccaggggtggagttgcatctggactgccgattggtggag
acattgagagatttaccagcagtatttaatgggctcagtaacaaacatggtgtggagctg
aaaaccatgcagaaaaaaggacaggaggagctggaggagctgaaactggcttatggtgat
tcgatagagaatgttgcatcacttcagggctgccacacccaccagagtgactctgtacag
acactagggctcaatactaaacagctgaccaaccagatgctggagctcaccaaagttata
aatgagctaaaagatgtactagttcaacaggtgaaagagactgccttcctcagaaacaca
atctctgagtgtcaagcatgtggcctgggtggtactacagtgaagcaacagtgtgctcct
ggtgtatgtttccgtcctgacatgtgtatcgagacggtggatggggtggaatgtggcccc
tgtcctgatggatacactggagacggctacagctgtgatgatgttgatgagtgtcagttt
aacccctgtttcccgggtgtgaaatgtgtaaacacagccccagggttccgctgtgaagca
tgtcctaacggctacaccggccaaccagtggaaggtgtgggtgtagcatttgcacagacg
cacaaacaggtgtgtgatgacattgatgaatgcagcgggatgaataatggaggctgcaca
gccaactctatctgcctgaactctatgggctcatatcgctgtggtggctgtaaaacagga
ttcaccggtgaccaattgagaggctgtaagccagagaagagctgtgggaatcggctgcag
aacccctgtgatccaaatgcacaatgcattgaggaacgagatggcactatcacctgtcag
tgtggtattggctgggcaggaaacgggtatctatgtggaaaggacactgacattgatgga
tacccagatgagaagcttcggtgccgagatcccacctgcaaaaaggacaattgtgttttg
gtgccaaattcaggacaggaagatgctgattcagatggacacggtgatgcctgtgaccca
gatgcagatggagatggaatactgaatgagcaggacaattgctggttgaagccaaatgtg
aatcagataaacagtgacaaggacagccatggtgatgcatgtgataactgccttacaatt
gagaatccagaccagcgggacactgattcagacggccttggggatgcatgtgatgatgac
atggatggagatggtattaaaaacttcctggacaactgtcaacgagtgaaaaatcaggac
cagaaggacagagaccgagacggagtgggagacgcttgtgacagctgccctgatattcct
aaccccaaccagtcagacattgataatgatcttgtcggagactcttgtgatacaaatcaa
gacagtgatggtgacggacatcaggattcaaaggacaactgtccattggtgataaacagc
tcccagttggacaccgataaagacggactcggtgacgagtgtgatgatgatgacgataac
gatggcatccctgattttcttcccccaggccctgataattgccgcttggtgcccaaccct
gaccaaacggatgacaacaatgacaatgtaggagacatatgtgagtcagattttgaccaa
gataaggtgattgacaggattgacaattgtcctgagaatgcagagatcacactgacagac
ttcagggcatatcagactgttgtgctggaccctgaaggtgatgcccagatagaccccaac
tgggtggttctcaaccagggaatggagattgtgcaaacaatgaacagtgaccctggcctt
gctgtgggttacactgcattcagtggtgttgacttcgagggcactttccatgtgaacact
gtgactgacgacgactatgctggcttcatattcggctatcaggactcatctagcttctat
gtggtgatgtggaagcaaacggagcaaacatactggcaggctacacccttcagagctgtc
gccgagcctggcattcaactaaaggcagtaaagtctaagactggtcctggtgaacattta
agaaactcgctctggcatactggagacactaatgatcaggtgcgtttgctctggaaagat
ccgcgtaatgtcggctggaaggacaaagtgtcttaccgctggtacctacaacatcgtcca
caagtggggtacatcagagtgcgcttctatgaaggcacaaagttggtagcagactctggt
gtgacaatcgacacaacgatgagaggaggcaggctgggtgtgttctgtttctctcaggag
aacatcatatggtccaacttgaagtaccgttgcaatgacactattccagaagacttccag
gagtttagcacacagccaatcttgtatccgctataa
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