Tachysurus vachellii: 132860364
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Entry
132860364 CDS
T09596
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tvc00536
]
132860364
Glycosaminoglycan binding proteins [BR:
tvc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132860364
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF3611
Motif
Other DBs
NCBI-GeneID:
132860364
NCBI-ProteinID:
XP_060747535
LinkDB
All DBs
Position
17:complement(18884208..18943180)
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AA seq
538 aa
AA seq
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MRVMAKETVNKSANSEHKTSFHCFQAACCLVLSVFSVFFCVLITLRTSHLEHRMQFLESE
RLSVLRAAPPSVQDNLSLWDAVEKLIHKRLTEEVPKLRTPREVGGACSCPPGPPGRRGRK
GNPGTPGTPGRDGYPGPLGVDGKPGSPGPKGIQGMPGPKGDKGDQGDVGPRGPPAHAASA
GLLSNQILTVKGDQGQAGPPGPPGPPGPSGPSGPPGNMGRDGPRGHPGEPGLPGKDGNEG
PSGPHGIKGDVGEPGMNGLQGPPGIKGEQGEPGDEGKRGMDGPPGIKGEKGDAGAPGLQK
GAPGVFENTDLSERLQILQGPPGPPGPPGEQGVKGEMGSPGIPGSEGTQGSKGERGDRGE
PGVTGEKGERGEMGLPGQTGDGGQKGEKGDSRIEDNLDQIIALPGPPGPPGPQGIMGLHG
MPGQKGEPGDSVKGEKGDVGEKGPQGPRGLQGYPGSNGLVGLPGAKGEKGKQGEPGLDGF
PGLRGEKGDKGERGEKGERGSLGKRGLKGEKGEQGPPGLDQPCPVDRDGLPIAGCWHK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatggcgaaggagacagtcaacaaatcagccaacagtgaacacaaaacctcc
ttccactgcttccaggctgcgtgttgtttagttctgtcggtattttcggtgtttttttgt
gtgctgatcaccttaaggacgtctcacctggagcacaggatgcagtttctggaaagcgag
cgcctttctgtcctgagagctgcacctccatctgtgcaggataatctctctctgtgggat
gcggtagaaaaactcatccacaagagactcacggaggaagtgcctaaacttcgtacaccg
agggaagtcggtggagcgtgctcttgcccaccaggacccccaggtagacgtggaagaaaa
gggaatcctggaactccaggaactccagggcgagatggctacccgggtcctcttggtgtg
gatggtaagcctggttctcctggtcctaaaggcattcaggggatgccagggccaaaagga
gataagggtgatcagggagatgtggggcccaggggccctccagcacatgctgcctctgct
ggacttctcagtaatcagatccttacagttaagggtgatcagggtcaggctgggcctcca
ggtcccccagggcctcctggaccatctggccccagtgggcccccaggaaacatgggcaga
gatggaccccggggccacccaggagagccgggtcttcctggcaaggatgggaatgagggt
ccaagtgggccacatggtataaagggtgatgttggagagcctggaatgaatgggcttcag
ggtcctccagggattaagggagaacaaggagaaccaggtgatgaagggaaaagaggcatg
gatggaccaccaggcataaagggagagaaaggagatgctggtgctccaggactccagaaa
ggtgctccaggtgtctttgagaacactgacctgtctgaaagactacaaattttgcagggc
ccacctggtcctccagggcctcctggagagcaaggagtaaagggagagatgggctctcct
gggattcctggatctgaaggcacacagggttcgaaaggagaaagaggggacagaggagaa
cctggagtgacaggagaaaaaggggagaggggagagatgggactgcctgggcaaaccgga
gatggtggacagaaaggggagaagggagactccagaattgaggacaatctggatcagatt
attgcattgccaggtcctccagggccacctggccctcaaggaattatgggccttcatggg
atgcctggtcaaaagggagagcctggtgattcagttaaaggagagaagggggatgttgga
gaaaaaggaccacaagggccacggggtcttcaaggttatcctgggtcaaatggattggta
ggtctaccaggtgcaaaaggtgaaaagggaaaacaaggagagcctggattagatggtttt
ccaggattacgaggagagaagggtgataaaggggaacgaggagaaaagggtgaaagaggc
tcgctggggaaaaggggtctgaaaggagagaaaggagagcagggacctccagggctggat
caaccttgtcctgtggaccgggatggactaccaatagcaggatgctggcataagtga
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